BLASTX nr result

ID: Cimicifuga21_contig00014602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014602
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521016.1| PREDICTED: ubiquitin-like-conjugating enzyme...   209   6e-52
gb|ACU24530.1| unknown [Glycine max]                                  209   6e-52
ref|XP_002270982.2| PREDICTED: ubiquitin-like-conjugating enzyme...   207   2e-51
ref|XP_002527286.1| transporter, putative [Ricinus communis] gi|...   198   1e-48
ref|XP_003529001.1| PREDICTED: ubiquitin-like-conjugating enzyme...   196   4e-48

>ref|XP_003521016.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Glycine
           max]
          Length = 240

 Score =  209 bits (531), Expect = 6e-52
 Identities = 103/189 (54%), Positives = 141/189 (74%), Gaps = 2/189 (1%)
 Frame = -2

Query: 727 VSCPRPFG-VAPGEVQGYLSLQQVPCPRSIEGDGGDVT-SGEEEPICTTKEEPADDATLV 554
           ++CP+    VA  +V+GYLSL+ +   +S +    D + + +EE   + +EEP D ATLV
Sbjct: 47  ITCPKQHHLVASHKVEGYLSLENMCHIKSSQEQESDRSLTWKEESNISQREEPFDKATLV 106

Query: 553 HNYDRELHFYDLHIVHSTSYRVPVLYFRGYHSDGQLLASGDIEKDLPYHSSKIIKDSRWT 374
              + E++ YD HIV+S SYRVPVLYFR Y SDGQLL   +IEKDLP HS+K+  +S+WT
Sbjct: 107 CP-EHEVNHYDFHIVYSASYRVPVLYFRSYRSDGQLLPFNEIEKDLPGHSAKLRSESKWT 165

Query: 373 FMTIEEHPYLNRPWYVLHPCGTSEWMKLLLISDACVSESGEVVQQYLLSWLSVVGQVVGI 194
           F+T EEHPYLNRPWY LHPCGTS+WMKLL  SD+ ++++G V++QYL+SW SV+GQVVG+
Sbjct: 166 FITHEEHPYLNRPWYKLHPCGTSDWMKLLFHSDSSLNKNGFVIEQYLISWFSVIGQVVGL 225

Query: 193 RVPLEVFKT 167
           ++PLE+  T
Sbjct: 226 KIPLEMLDT 234


>gb|ACU24530.1| unknown [Glycine max]
          Length = 240

 Score =  209 bits (531), Expect = 6e-52
 Identities = 103/189 (54%), Positives = 141/189 (74%), Gaps = 2/189 (1%)
 Frame = -2

Query: 727 VSCPRPFG-VAPGEVQGYLSLQQVPCPRSIEGDGGDVT-SGEEEPICTTKEEPADDATLV 554
           ++CP+    VA  +V+GYLSL+ +   +S +    D + + +EE   + +EEP D ATLV
Sbjct: 47  ITCPKQHHLVASHKVEGYLSLENMCHIKSSQEQESDRSLTWKEESNISQREEPFDKATLV 106

Query: 553 HNYDRELHFYDLHIVHSTSYRVPVLYFRGYHSDGQLLASGDIEKDLPYHSSKIIKDSRWT 374
              + E++ YD HIV+S SYRVPVLYFR Y SDGQLL   +IEKDLP HS+K+  +S+WT
Sbjct: 107 CP-EHEVNHYDFHIVYSASYRVPVLYFRSYRSDGQLLPFNEIEKDLPGHSAKLRSESKWT 165

Query: 373 FMTIEEHPYLNRPWYVLHPCGTSEWMKLLLISDACVSESGEVVQQYLLSWLSVVGQVVGI 194
           F+T EEHPYLNRPWY LHPCGTS+WMKLL  SD+ ++++G V++QYL+SW SV+GQVVG+
Sbjct: 166 FITHEEHPYLNRPWYKLHPCGTSDWMKLLFHSDSSLNKNGFVIEQYLISWFSVIGQVVGL 225

Query: 193 RVPLEVFKT 167
           ++PLE+  T
Sbjct: 226 KIPLEMLDT 234


>ref|XP_002270982.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Vitis
           vinifera] gi|302144207|emb|CBI23334.3| unnamed protein
           product [Vitis vinifera]
          Length = 230

 Score =  207 bits (527), Expect = 2e-51
 Identities = 103/190 (54%), Positives = 135/190 (71%), Gaps = 4/190 (2%)
 Frame = -2

Query: 718 PRPFG--VAPGEVQGYLSLQQVPCPRSIEGDGGDVT-SGEEEPICTTKEEPADDATLVHN 548
           PRP    +   EV+GYLSL+ +   RS E D  + +  G EEP C  K+E  D+ATLV +
Sbjct: 40  PRPKSPWLTSHEVEGYLSLENMCILRSCEEDHDEKSHKGNEEPNCPGKDEYIDNATLVQS 99

Query: 547 YDRELHFYDLHIVHSTSYRVPVLYFRGYHSDGQLLASGDIEKDLPYHSSKIIKDSRWTFM 368
           Y  ++ ++D HIVHS SYRVPVLYFR + SDGQ L   D+EK+LP +S+ ++ +S+WTF+
Sbjct: 100 YSHDVRYFDFHIVHSASYRVPVLYFRTFSSDGQPLLLEDVEKELPGNSTNVLMESKWTFI 159

Query: 367 TIEEHPYLNRPWYVLHPCGTSEWMKLLLISDACVSES-GEVVQQYLLSWLSVVGQVVGIR 191
           T EEHPYLNRPWY LHPCGTSEWMKLL ++D  +  S G  V+ YL SW+S+VGQ VG++
Sbjct: 160 TQEEHPYLNRPWYKLHPCGTSEWMKLLFLTDPSLGGSQGVPVELYLSSWISMVGQAVGLK 219

Query: 190 VPLEVFKTPT 161
           VPLE+F   T
Sbjct: 220 VPLEMFNKRT 229


>ref|XP_002527286.1| transporter, putative [Ricinus communis]
           gi|223533379|gb|EEF35130.1| transporter, putative
           [Ricinus communis]
          Length = 233

 Score =  198 bits (503), Expect = 1e-48
 Identities = 96/191 (50%), Positives = 133/191 (69%), Gaps = 2/191 (1%)
 Frame = -2

Query: 727 VSCPRPFGVAPGEVQGYLSLQQVPCPRSIEG--DGGDVTSGEEEPICTTKEEPADDATLV 554
           ++ P+   VA  +V+G+LSL+++ C   +E   D  D T  EE      +E   DDATLV
Sbjct: 40  INAPKRPYVASQQVEGFLSLEKM-CLPVLENYYDNSDCTREEEVNFSGKEEAIDDDATLV 98

Query: 553 HNYDRELHFYDLHIVHSTSYRVPVLYFRGYHSDGQLLASGDIEKDLPYHSSKIIKDSRWT 374
           ++   ++H+YD HIV+S SYRVPVLYFRGY SDG+ L   +IEKDLP  S+K++ +S+WT
Sbjct: 99  YSSHHQVHYYDFHIVYSNSYRVPVLYFRGYCSDGRPLQLNEIEKDLPTCSAKVLLESKWT 158

Query: 373 FMTIEEHPYLNRPWYVLHPCGTSEWMKLLLISDACVSESGEVVQQYLLSWLSVVGQVVGI 194
           F+T EEHPYLNRPW+ LHPCGTSEWM+LL + DA  +E    ++ YL+SW SV GQV+ +
Sbjct: 159 FITQEEHPYLNRPWHKLHPCGTSEWMRLLFLGDAVSAEKRVAIELYLVSWFSVAGQVISL 218

Query: 193 RVPLEVFKTPT 161
           R+P+E+    T
Sbjct: 219 RIPIEMVNDHT 229


>ref|XP_003529001.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Glycine
           max]
          Length = 238

 Score =  196 bits (498), Expect = 4e-48
 Identities = 96/188 (51%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
 Frame = -2

Query: 727 VSCPRPFGVAPGEVQGYLSLQQVPCPRSIEGDGGDVT-SGEEEPICTTKEEPADDATLVH 551
           + C +   VA  +V+GYLSL+ +   +S E +  D + + +EE   + +EEP D+A LV 
Sbjct: 46  IPCLKHHLVASHKVEGYLSLENMCHIKSSEEEESDRSLTWKEESNISQREEPFDNAALVC 105

Query: 550 NYDRELHFYDLHIVHSTSYRVPVLYFRGYHSDGQLLASGDIEKDLPYHSSKIIKDSRWTF 371
             + E++ YD HIV+S +YRVPVLYFR YH DGQLL   +IEKDLP HS+K+  +S+WTF
Sbjct: 106 P-EHEVNQYDFHIVYSATYRVPVLYFRSYHGDGQLLPFDEIEKDLPGHSAKLRSESKWTF 164

Query: 370 MTIEEHPYLNRPWYVLHPCGTSEWMKLLLISDACVSESGEVVQQYLLSWLSVVGQVVGIR 191
           ++ EEHPYLNRPWY LHPCGTS+WMKLL   D+ +++   V++QYL+SW S +G VVG++
Sbjct: 165 ISHEEHPYLNRPWYKLHPCGTSDWMKLLFNGDSSLNKKDFVIEQYLVSWFSAIGLVVGLK 224

Query: 190 VPLEVFKT 167
           +PLE+  T
Sbjct: 225 MPLEMLDT 232


Top