BLASTX nr result
ID: Cimicifuga21_contig00014596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00014596
(796 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera] 305 8e-81
ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat... 303 3e-80
emb|CBI21173.3| unnamed protein product [Vitis vinifera] 302 5e-80
ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|2... 301 1e-79
ref|XP_002533336.1| pentatricopeptide repeat-containing protein,... 296 5e-78
>emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 305 bits (781), Expect = 8e-81
Identities = 145/196 (73%), Positives = 168/196 (85%)
Frame = -1
Query: 793 IQETEVKPDHITFVAALTACSHIGLVEQGSVFLKSMETDYGIPPRMEHYGCGVDLFGRAG 614
+++ VK DHITFVA LTACSHIGLVE+G FLKSME+DYGIPPRMEHY C +DL GRAG
Sbjct: 476 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 535
Query: 613 RLSEAKELVESMPFEPDAMVLKTLLGACRIKGDIELASEVARRLLVLEPEEHCTYVLLSN 434
RL EAK L+E+MPFEPDAMV KTLLGACR GDIELAS+VA LL LEPEEHCTYVLLS+
Sbjct: 536 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 595
Query: 433 MYGHLGRWDERANVKKVMRERGVKKVPGWSWVEVKNEVHAFNAEDRLHPRCEEIYRILGE 254
M+GHL RW+E+A++K++M+ERGVKKVPGWSW+EVKNEVH+FNAEDR HP CEEIY LG+
Sbjct: 596 MFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVHSFNAEDRSHPNCEEIYLRLGD 655
Query: 253 LMEEINWSSGVANVDL 206
LMEEI VAN ++
Sbjct: 656 LMEEIRRLDYVANSEI 671
>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 303 bits (776), Expect = 3e-80
Identities = 145/196 (73%), Positives = 167/196 (85%)
Frame = -1
Query: 793 IQETEVKPDHITFVAALTACSHIGLVEQGSVFLKSMETDYGIPPRMEHYGCGVDLFGRAG 614
+++ VK DHITFVA LTACSHIGLVE+G FLKSME+DYGIPPRMEHY C +DL GRAG
Sbjct: 498 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 557
Query: 613 RLSEAKELVESMPFEPDAMVLKTLLGACRIKGDIELASEVARRLLVLEPEEHCTYVLLSN 434
RL EAK L+E+MPFEPDAMV KTLLGACR GDIELAS+VA LL LEPEEHCTYVLLS+
Sbjct: 558 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 617
Query: 433 MYGHLGRWDERANVKKVMRERGVKKVPGWSWVEVKNEVHAFNAEDRLHPRCEEIYRILGE 254
M+GHL RW+E+A++K++M+ERGVKKVPGWSW+EVKNEV +FNAEDR HP CEEIY LGE
Sbjct: 618 MFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGE 677
Query: 253 LMEEINWSSGVANVDL 206
LMEEI VAN ++
Sbjct: 678 LMEEIRRLDYVANSEI 693
>emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 302 bits (774), Expect = 5e-80
Identities = 145/193 (75%), Positives = 165/193 (85%)
Frame = -1
Query: 793 IQETEVKPDHITFVAALTACSHIGLVEQGSVFLKSMETDYGIPPRMEHYGCGVDLFGRAG 614
+++ VK DHITFVA LTACSHIGLVE+G FLKSME+DYGIPPRMEHY C +DL GRAG
Sbjct: 397 MKDRRVKLDHITFVAVLTACSHIGLVEEGWSFLKSMESDYGIPPRMEHYACMIDLLGRAG 456
Query: 613 RLSEAKELVESMPFEPDAMVLKTLLGACRIKGDIELASEVARRLLVLEPEEHCTYVLLSN 434
RL EAK L+E+MPFEPDAMV KTLLGACR GDIELAS+VA LL LEPEEHCTYVLLS+
Sbjct: 457 RLDEAKALIEAMPFEPDAMVWKTLLGACRTCGDIELASQVASHLLELEPEEHCTYVLLSS 516
Query: 433 MYGHLGRWDERANVKKVMRERGVKKVPGWSWVEVKNEVHAFNAEDRLHPRCEEIYRILGE 254
M+GHL RW+E+A++K++M+ERGVKKVPGWSW+EVKNEV +FNAEDR HP CEEIY LGE
Sbjct: 517 MFGHLRRWNEKASIKRLMKERGVKKVPGWSWIEVKNEVRSFNAEDRSHPNCEEIYLRLGE 576
Query: 253 LMEEINWSSGVAN 215
LMEEI VAN
Sbjct: 577 LMEEIRRLDYVAN 589
>ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|222853273|gb|EEE90820.1|
predicted protein [Populus trichocarpa]
Length = 711
Score = 301 bits (770), Expect = 1e-79
Identities = 146/218 (66%), Positives = 177/218 (81%)
Frame = -1
Query: 793 IQETEVKPDHITFVAALTACSHIGLVEQGSVFLKSMETDYGIPPRMEHYGCGVDLFGRAG 614
++E EVK DH+TFVA LTACSH+GLVEQG LKSME+DYGIPPRMEHY C VDLFGRAG
Sbjct: 500 MREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAG 559
Query: 613 RLSEAKELVESMPFEPDAMVLKTLLGACRIKGDIELASEVARRLLVLEPEEHCTYVLLSN 434
L EAK L++SMPF+P+AMVLKTLLGACR G+IELA++VA +LL +EPEEHCTYV+LSN
Sbjct: 560 YLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQLLEVEPEEHCTYVILSN 619
Query: 433 MYGHLGRWDERANVKKVMRERGVKKVPGWSWVEVKNEVHAFNAEDRLHPRCEEIYRILGE 254
MYGHL RWD++A+V ++MRER VKKVPGWSW+EVKNEVHAF AEDR HP E++Y+ILGE
Sbjct: 620 MYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAFKAEDRSHPYSEDVYQILGE 679
Query: 253 LMEEINWSSGVANVDLHIHGFDFEDGDYD*MCPVSNLN 140
LMEE+ +A+ D +H D + M P S+L+
Sbjct: 680 LMEEMKRLHSLASFDSLMH-------DVNHMYPSSDLS 710
>ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526827|gb|EEF29045.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 708
Score = 296 bits (757), Expect = 5e-78
Identities = 143/204 (70%), Positives = 165/204 (80%)
Frame = -1
Query: 796 KIQETEVKPDHITFVAALTACSHIGLVEQGSVFLKSMETDYGIPPRMEHYGCGVDLFGRA 617
++++ +VK DHITFVAALTACSHIGLVEQG LKSM +DYGI PRMEHY C VDLFGRA
Sbjct: 496 QMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRA 555
Query: 616 GRLSEAKELVESMPFEPDAMVLKTLLGACRIKGDIELASEVARRLLVLEPEEHCTYVLLS 437
G L EAK L+ESMPF+PDAMV KTLLGACR GDIELA++VA LL LEPEEHCTYV+LS
Sbjct: 556 GYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLLELEPEEHCTYVILS 615
Query: 436 NMYGHLGRWDERANVKKVMRERGVKKVPGWSWVEVKNEVHAFNAEDRLHPRCEEIYRILG 257
NMYGHL RWDE+A + ++MRER VKKVPGWSW+EVKNEVHAF A+DR H EEIY+IL
Sbjct: 616 NMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFIADDRCHSHFEEIYQILE 675
Query: 256 ELMEEINWSSGVANVDLHIHGFDF 185
+LME+I W VA D + D+
Sbjct: 676 QLMEDIKWLDSVAGSDSLLDDVDY 699