BLASTX nr result

ID: Cimicifuga21_contig00014577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014577
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33743.3| unnamed protein product [Vitis vinifera]              170   1e-40
ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing p...   170   1e-40
ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ri...   169   3e-40
ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing p...   166   2e-39

>emb|CBI33743.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/98 (82%), Positives = 93/98 (94%)
 Frame = +2

Query: 89  MSSITSVELNYLVFRYLQESGFTHSAFALGYEAGINKSPIDGNLVPPAALITFVQKGLQY 268
           MSSITS ELNYLVFRYL ESGFTHSAF+LGYEAGINK PIDGN+VPP ALITFVQKGLQ+
Sbjct: 1   MSSITSAELNYLVFRYLHESGFTHSAFSLGYEAGINKCPIDGNMVPPGALITFVQKGLQF 60

Query: 269 LELEANLSSGDTDVDDDFAFVQPLDLITKDVYELQRMI 382
           +E+EANLS+ DTDVDDDF+F+QPLDLITKDV++L++MI
Sbjct: 61  VEMEANLSNSDTDVDDDFSFLQPLDLITKDVHQLRQMI 98


>ref|XP_002283852.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1X-like
           isoform 1 [Vitis vinifera]
          Length = 590

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/98 (82%), Positives = 93/98 (94%)
 Frame = +2

Query: 89  MSSITSVELNYLVFRYLQESGFTHSAFALGYEAGINKSPIDGNLVPPAALITFVQKGLQY 268
           MSSITS ELNYLVFRYL ESGFTHSAF+LGYEAGINK PIDGN+VPP ALITFVQKGLQ+
Sbjct: 1   MSSITSAELNYLVFRYLHESGFTHSAFSLGYEAGINKCPIDGNMVPPGALITFVQKGLQF 60

Query: 269 LELEANLSSGDTDVDDDFAFVQPLDLITKDVYELQRMI 382
           +E+EANLS+ DTDVDDDF+F+QPLDLITKDV++L++MI
Sbjct: 61  VEMEANLSNSDTDVDDDFSFLQPLDLITKDVHQLRQMI 98


>ref|XP_002524944.1| Polyadenylation factor subunit, putative [Ricinus communis]
           gi|223535779|gb|EEF37441.1| Polyadenylation factor
           subunit, putative [Ricinus communis]
          Length = 582

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/98 (82%), Positives = 92/98 (93%)
 Frame = +2

Query: 89  MSSITSVELNYLVFRYLQESGFTHSAFALGYEAGINKSPIDGNLVPPAALITFVQKGLQY 268
           M++ITS ELNYLVFRYLQESGFTHSAFALGYEAGINK  IDGN+VPP ALITFVQKG+QY
Sbjct: 1   MTTITSSELNYLVFRYLQESGFTHSAFALGYEAGINKCTIDGNMVPPGALITFVQKGIQY 60

Query: 269 LELEANLSSGDTDVDDDFAFVQPLDLITKDVYELQRMI 382
           LE+EANLS+ D DVD+DF+F+QPLDLITKDVYEL++MI
Sbjct: 61  LEMEANLSNSDADVDEDFSFLQPLDLITKDVYELRQMI 98


>ref|XP_002306492.1| predicted protein [Populus trichocarpa] gi|222855941|gb|EEE93488.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  167 bits (424), Expect = 8e-40
 Identities = 81/98 (82%), Positives = 91/98 (92%)
 Frame = +2

Query: 89  MSSITSVELNYLVFRYLQESGFTHSAFALGYEAGINKSPIDGNLVPPAALITFVQKGLQY 268
           M+SITSVELNYLVFRYLQESGFTHSAFALGYE GINK  IDGN++PP ALITFVQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFTHSAFALGYEGGINKCTIDGNMIPPGALITFVQKGLQY 60

Query: 269 LELEANLSSGDTDVDDDFAFVQPLDLITKDVYELQRMI 382
           LE+EANLS+ D DVD+DF+F+QPLDLITKDV ELQ++I
Sbjct: 61  LEMEANLSNSDADVDEDFSFLQPLDLITKDVNELQQII 98


>ref|XP_004141895.1| PREDICTED: F-box-like/WD repeat-containing protein TBL1XR1-like
           [Cucumis sativus] gi|449513123|ref|XP_004164237.1|
           PREDICTED: F-box-like/WD repeat-containing protein
           TBL1XR1-like [Cucumis sativus]
          Length = 594

 Score =  166 bits (421), Expect = 2e-39
 Identities = 80/98 (81%), Positives = 92/98 (93%)
 Frame = +2

Query: 89  MSSITSVELNYLVFRYLQESGFTHSAFALGYEAGINKSPIDGNLVPPAALITFVQKGLQY 268
           M+SITSVELNYLVFRYLQESGF HSAFALGYEAGINK  IDGNLVPP AL+T VQKGLQY
Sbjct: 1   MTSITSVELNYLVFRYLQESGFIHSAFALGYEAGINKCSIDGNLVPPGALVTVVQKGLQY 60

Query: 269 LELEANLSSGDTDVDDDFAFVQPLDLITKDVYELQRMI 382
           LE+EANLS+ DTD+D+DF+F+QPLDLITKDV+EL+++I
Sbjct: 61  LEMEANLSNNDTDIDEDFSFLQPLDLITKDVHELRQII 98


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