BLASTX nr result

ID: Cimicifuga21_contig00014555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014555
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatul...   108   6e-22
ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductas...   107   1e-21
ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]     105   5e-21
ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]     103   1e-20
ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19

>ref|XP_003613819.1| (R)-mandelonitrile lyase [Medicago truncatula]
           gi|355515154|gb|AES96777.1| (R)-mandelonitrile lyase
           [Medicago truncatula]
          Length = 543

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/88 (57%), Positives = 68/88 (77%)
 Frame = -2

Query: 277 GNGSKPRASGIRFIKSNGSMDICYEAYLNQPSNPESGGDVVLSAGAIGSPQILMLSGIGP 98
           G+ ++ RA GI+FIKSNGS+D  YEA++ +P++  S GDV+LSAGA+GSPQ+L+LSGIGP
Sbjct: 253 GDKNETRAKGIKFIKSNGSLDETYEAFIKKPNHSTSRGDVILSAGALGSPQLLLLSGIGP 312

Query: 97  HEHLTKFNITPLTNAPQVGQYITDNPCL 14
            E L KFNI  +    QVGQ + DNPC+
Sbjct: 313 KEQLKKFNIPLVHEMKQVGQGMQDNPCI 340


>ref|XP_002522448.1| glucose-methanol-choline (gmc) oxidoreductase, putative [Ricinus
           communis] gi|223538333|gb|EEF39940.1|
           glucose-methanol-choline (gmc) oxidoreductase, putative
           [Ricinus communis]
          Length = 537

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/89 (62%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
 Frame = -2

Query: 274 NGSKPR--ASGIRFIKSNGSMDICYEAYLNQPSNPESGGDVVLSAGAIGSPQILMLSGIG 101
           NGS+    A GIRFIKSNGS D  YEAYLNQP N  S GDV+LSAGA+GSPQILMLSGIG
Sbjct: 246 NGSENERIAHGIRFIKSNGSTDQIYEAYLNQPKNSSSWGDVILSAGALGSPQILMLSGIG 305

Query: 100 PHEHLTKFNITPLTNAPQVGQYITDNPCL 14
           P +HL  F+I  + +   VGQ + DNP +
Sbjct: 306 PQKHLKNFSIPLVWDLKGVGQEMKDNPAI 334


>ref|XP_003520079.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 559

 Score =  105 bits (261), Expect = 5e-21
 Identities = 49/87 (56%), Positives = 66/87 (75%)
 Frame = -2

Query: 274 NGSKPRASGIRFIKSNGSMDICYEAYLNQPSNPESGGDVVLSAGAIGSPQILMLSGIGPH 95
           N ++ RA GIRFI+SNG++D  YEAY+N+  N  S GDV+L+AGA+GSPQ++MLSGIGP 
Sbjct: 269 NRNETRAKGIRFIQSNGTLDETYEAYINKAKNSSSKGDVILAAGALGSPQLMMLSGIGPK 328

Query: 94  EHLTKFNITPLTNAPQVGQYITDNPCL 14
           E L +FNI+ +     VGQ + DNPC+
Sbjct: 329 EQLRRFNISIVHEMKGVGQGMQDNPCI 355


>ref|XP_003517995.1| PREDICTED: protein HOTHEAD-like [Glycine max]
          Length = 502

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/85 (56%), Positives = 65/85 (76%)
 Frame = -2

Query: 268 SKPRASGIRFIKSNGSMDICYEAYLNQPSNPESGGDVVLSAGAIGSPQILMLSGIGPHEH 89
           ++ RA GIRFI+SNG++D  YEAY+N+  N  S GDV+L+AGA+GSPQ++MLSGIGP E 
Sbjct: 214 NETRAKGIRFIQSNGTLDETYEAYINKAKNSSSRGDVILAAGALGSPQLMMLSGIGPKEQ 273

Query: 88  LTKFNITPLTNAPQVGQYITDNPCL 14
           L +FNI+ +     VGQ + DNPC+
Sbjct: 274 LRRFNISIVREMKGVGQGMQDNPCI 298


>ref|XP_002315047.1| predicted protein [Populus trichocarpa] gi|222864087|gb|EEF01218.1|
           predicted protein [Populus trichocarpa]
          Length = 489

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 48/85 (56%), Positives = 61/85 (71%)
 Frame = -2

Query: 274 NGSKPRASGIRFIKSNGSMDICYEAYLNQPSNPESGGDVVLSAGAIGSPQILMLSGIGPH 95
           +G++    G+RFIKS+GS    YEAYLNQP N  S GDV+LSAGA+GSPQIL+LSGIGP 
Sbjct: 213 HGNESMVRGVRFIKSDGSTSQTYEAYLNQPENSSSWGDVILSAGALGSPQILLLSGIGPE 272

Query: 94  EHLTKFNITPLTNAPQVGQYITDNP 20
           +HL  F I  + +   VG+ + DNP
Sbjct: 273 KHLRNFGIPLVLDLKGVGKEMKDNP 297


Top