BLASTX nr result

ID: Cimicifuga21_contig00014530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014530
         (947 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm...   117   1e-40
emb|CBI22666.3| unnamed protein product [Vitis vinifera]              115   1e-39
ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-l...   109   7e-38
ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun...   117   4e-37
emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera]   106   5e-37

>ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis]
           gi|223547567|gb|EEF49062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 170

 Score =  117 bits (292), Expect(2) = 1e-40
 Identities = 52/67 (77%), Positives = 61/67 (91%)
 Frame = +3

Query: 201 DSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFAF 380
           DS+  +D+K + +LY+GNLD RITEA LIKMFSP+GKI+SEDFLWHTRGPKRGEPRGFAF
Sbjct: 3   DSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAF 62

Query: 381 VQFNTKE 401
           VQF+TKE
Sbjct: 63  VQFSTKE 69



 Score = 77.0 bits (188), Expect(2) = 1e-40
 Identities = 43/86 (50%), Positives = 50/86 (58%)
 Frame = +1

Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633
           EAELAKEKMHG+L CGRPLVVR ASEKYL E   N  +AVG+  K+S  G +SG      
Sbjct: 70  EAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRNA 129

Query: 634 XXXXXXXXXXXXEEECSSSSKKARQG 711
                       EEE SS  K+ + G
Sbjct: 130 KIAAIKNKLRTLEEEGSSVKKQKQSG 155


>emb|CBI22666.3| unnamed protein product [Vitis vinifera]
          Length = 188

 Score =  115 bits (288), Expect(2) = 1e-39
 Identities = 52/72 (72%), Positives = 61/72 (84%)
 Frame = +3

Query: 186 LCFFMDSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEP 365
           LC  MD +SL D K + RL+IGNLD R++E  LIKMFSPFGKI+ EDF+WHTRGPKRGEP
Sbjct: 15  LCSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEP 74

Query: 366 RGFAFVQFNTKE 401
           RGFAFV+F+TKE
Sbjct: 75  RGFAFVEFSTKE 86



 Score = 75.1 bits (183), Expect(2) = 1e-39
 Identities = 44/93 (47%), Positives = 53/93 (56%)
 Frame = +1

Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633
           EAELAKEKMHGKL+CGRPL VR A+EK L+E     P+ VG   KSSL G SSG      
Sbjct: 87  EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 146

Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT*SN 732
                       EEE S+ +K+ +  D  + SN
Sbjct: 147 KIAAIKNKLKEMEEE-SNGTKRQKVADKVSCSN 178


>ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera]
          Length = 218

 Score =  109 bits (272), Expect(2) = 7e-38
 Identities = 49/67 (73%), Positives = 58/67 (86%)
 Frame = +3

Query: 201 DSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFAF 380
           D +SL D K + RL+IGNLD R++E  LIKMFSPFGKI+ EDF+WHTRGPKRGEPRGFAF
Sbjct: 50  DPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFAF 109

Query: 381 VQFNTKE 401
           V+F+TKE
Sbjct: 110 VEFSTKE 116



 Score = 75.1 bits (183), Expect(2) = 7e-38
 Identities = 44/93 (47%), Positives = 53/93 (56%)
 Frame = +1

Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633
           EAELAKEKMHGKL+CGRPL VR A+EK L+E     P+ VG   KSSL G SSG      
Sbjct: 117 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 176

Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT*SN 732
                       EEE S+ +K+ +  D  + SN
Sbjct: 177 KIAAIKNKLKEMEEE-SNGTKRQKVADKVSCSN 208


>ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|357473041|ref|XP_003606805.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355478466|gb|AES59669.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355507860|gb|AES89002.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 157

 Score =  117 bits (294), Expect(2) = 4e-37
 Identities = 53/68 (77%), Positives = 61/68 (89%)
 Frame = +3

Query: 198 MDSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFA 377
           MD +  VDDK + RLY+GNLD RITEA L+KMFSP+GKIMSEDFLWHTRGPKRGEPRGFA
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 378 FVQFNTKE 401
           F+Q++TKE
Sbjct: 61  FIQYSTKE 68



 Score = 64.3 bits (155), Expect(2) = 4e-37
 Identities = 37/90 (41%), Positives = 47/90 (52%)
 Frame = +1

Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633
           EA LAKEKMHG+L C RPLVVR A E+Y +EK  +  KAV +G K  L G   G      
Sbjct: 69  EAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRSA 128

Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT 723
                       EE+ +S +KK +  D  +
Sbjct: 129 KIAAIKNKLKSLEED-NSKTKKQKLSDNVS 157


>emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera]
          Length = 216

 Score =  106 bits (265), Expect(2) = 5e-37
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = +3

Query: 201 DSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFAF 380
           D   L D K + RL+IGNLD R++E  LIKMFSPFGKI+ EDF+WHTRGPKRGEPRGFAF
Sbjct: 44  DPXXLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFAF 103

Query: 381 VQFNTKE 401
           V+F+TKE
Sbjct: 104 VEFSTKE 110



 Score = 75.1 bits (183), Expect(2) = 5e-37
 Identities = 44/93 (47%), Positives = 53/93 (56%)
 Frame = +1

Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633
           EAELAKEKMHGKL+CGRPL VR A+EK L+E     P+ VG   KSSL G SSG      
Sbjct: 115 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 174

Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT*SN 732
                       EEE S+ +K+ +  D  + SN
Sbjct: 175 KIAAIKNKLKEMEEE-SNGTKRQKVADKVSCSN 206


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