BLASTX nr result
ID: Cimicifuga21_contig00014530
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00014530 (947 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513659.1| conserved hypothetical protein [Ricinus comm... 117 1e-40 emb|CBI22666.3| unnamed protein product [Vitis vinifera] 115 1e-39 ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-l... 109 7e-38 ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun... 117 4e-37 emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera] 106 5e-37 >ref|XP_002513659.1| conserved hypothetical protein [Ricinus communis] gi|223547567|gb|EEF49062.1| conserved hypothetical protein [Ricinus communis] Length = 170 Score = 117 bits (292), Expect(2) = 1e-40 Identities = 52/67 (77%), Positives = 61/67 (91%) Frame = +3 Query: 201 DSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFAF 380 DS+ +D+K + +LY+GNLD RITEA LIKMFSP+GKI+SEDFLWHTRGPKRGEPRGFAF Sbjct: 3 DSNGFIDEKAESKLYVGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAF 62 Query: 381 VQFNTKE 401 VQF+TKE Sbjct: 63 VQFSTKE 69 Score = 77.0 bits (188), Expect(2) = 1e-40 Identities = 43/86 (50%), Positives = 50/86 (58%) Frame = +1 Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633 EAELAKEKMHG+L CGRPLVVR ASEKYL E N +AVG+ K+S G +SG Sbjct: 70 EAELAKEKMHGRLACGRPLVVRLASEKYLEEAAQNSCRAVGEMKKTSTAGGTSGQMSRNA 129 Query: 634 XXXXXXXXXXXXEEECSSSSKKARQG 711 EEE SS K+ + G Sbjct: 130 KIAAIKNKLRTLEEEGSSVKKQKQSG 155 >emb|CBI22666.3| unnamed protein product [Vitis vinifera] Length = 188 Score = 115 bits (288), Expect(2) = 1e-39 Identities = 52/72 (72%), Positives = 61/72 (84%) Frame = +3 Query: 186 LCFFMDSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEP 365 LC MD +SL D K + RL+IGNLD R++E LIKMFSPFGKI+ EDF+WHTRGPKRGEP Sbjct: 15 LCSIMDPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEP 74 Query: 366 RGFAFVQFNTKE 401 RGFAFV+F+TKE Sbjct: 75 RGFAFVEFSTKE 86 Score = 75.1 bits (183), Expect(2) = 1e-39 Identities = 44/93 (47%), Positives = 53/93 (56%) Frame = +1 Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633 EAELAKEKMHGKL+CGRPL VR A+EK L+E P+ VG KSSL G SSG Sbjct: 87 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 146 Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT*SN 732 EEE S+ +K+ + D + SN Sbjct: 147 KIAAIKNKLKEMEEE-SNGTKRQKVADKVSCSN 178 >ref|XP_002272950.2| PREDICTED: probable RNA-binding protein 18-like [Vitis vinifera] Length = 218 Score = 109 bits (272), Expect(2) = 7e-38 Identities = 49/67 (73%), Positives = 58/67 (86%) Frame = +3 Query: 201 DSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFAF 380 D +SL D K + RL+IGNLD R++E LIKMFSPFGKI+ EDF+WHTRGPKRGEPRGFAF Sbjct: 50 DPNSLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFAF 109 Query: 381 VQFNTKE 401 V+F+TKE Sbjct: 110 VEFSTKE 116 Score = 75.1 bits (183), Expect(2) = 7e-38 Identities = 44/93 (47%), Positives = 53/93 (56%) Frame = +1 Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633 EAELAKEKMHGKL+CGRPL VR A+EK L+E P+ VG KSSL G SSG Sbjct: 117 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 176 Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT*SN 732 EEE S+ +K+ + D + SN Sbjct: 177 KIAAIKNKLKEMEEE-SNGTKRQKVADKVSCSN 208 >ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula] gi|357473041|ref|XP_003606805.1| Polyadenylate-binding protein [Medicago truncatula] gi|355478466|gb|AES59669.1| Polyadenylate-binding protein [Medicago truncatula] gi|355507860|gb|AES89002.1| Polyadenylate-binding protein [Medicago truncatula] Length = 157 Score = 117 bits (294), Expect(2) = 4e-37 Identities = 53/68 (77%), Positives = 61/68 (89%) Frame = +3 Query: 198 MDSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFA 377 MD + VDDK + RLY+GNLD RITEA L+KMFSP+GKIMSEDFLWHTRGPKRGEPRGFA Sbjct: 1 MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60 Query: 378 FVQFNTKE 401 F+Q++TKE Sbjct: 61 FIQYSTKE 68 Score = 64.3 bits (155), Expect(2) = 4e-37 Identities = 37/90 (41%), Positives = 47/90 (52%) Frame = +1 Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633 EA LAKEKMHG+L C RPLVVR A E+Y +EK + KAV +G K L G G Sbjct: 69 EAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLTGGGIGQTSRSA 128 Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT 723 EE+ +S +KK + D + Sbjct: 129 KIAAIKNKLKSLEED-NSKTKKQKLSDNVS 157 >emb|CAN68282.1| hypothetical protein VITISV_021345 [Vitis vinifera] Length = 216 Score = 106 bits (265), Expect(2) = 5e-37 Identities = 48/67 (71%), Positives = 56/67 (83%) Frame = +3 Query: 201 DSDSLVDDKRDRRLYIGNLDHRITEAVLIKMFSPFGKIMSEDFLWHTRGPKRGEPRGFAF 380 D L D K + RL+IGNLD R++E LIKMFSPFGKI+ EDF+WHTRGPKRGEPRGFAF Sbjct: 44 DPXXLTDKKCECRLFIGNLDKRVSEVALIKMFSPFGKIVGEDFMWHTRGPKRGEPRGFAF 103 Query: 381 VQFNTKE 401 V+F+TKE Sbjct: 104 VEFSTKE 110 Score = 75.1 bits (183), Expect(2) = 5e-37 Identities = 44/93 (47%), Positives = 53/93 (56%) Frame = +1 Query: 454 EAELAKEKMHGKLVCGRPLVVRFASEKYLVEKEANQPKAVGDGIKSSLVGSSSGXXXXXX 633 EAELAKEKMHGKL+CGRPL VR A+EK L+E P+ VG KSSL G SSG Sbjct: 115 EAELAKEKMHGKLICGRPLTVRLANEKSLMETAEAAPQRVGTSNKSSLTGRSSGQMSRSA 174 Query: 634 XXXXXXXXXXXXEEECSSSSKKARQGDTTT*SN 732 EEE S+ +K+ + D + SN Sbjct: 175 KIAAIKNKLKEMEEE-SNGTKRQKVADKVSCSN 206