BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014508
         (5614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213...  1823   0.0  
ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cuc...  1821   0.0  
ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family prote...  1703   0.0  
ref|XP_002524359.1| RNA binding protein, putative [Ricinus commu...  1690   0.0  
ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [...  1680   0.0  

>ref|XP_004147263.1| PREDICTED: uncharacterized protein LOC101213211 [Cucumis sativus]
          Length = 1833

 Score = 1823 bits (4723), Expect = 0.0
 Identities = 994/1841 (53%), Positives = 1259/1841 (68%), Gaps = 15/1841 (0%)
 Frame = -2

Query: 5478 IVDSLTKSFKSVPCAAVPSILDCIXXXXXXXXXXXXXXXLNAFSELIKE---DHGHSDGS 5308
            +  SL++SF+ VP  AVP+ILDC+               L  F + I +     G  D  
Sbjct: 4    VFSSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKEGKLDAD 63

Query: 5307 QSSYISPFTTALCYLLKKSGTDPTALKSFVWRGYIPVMKIINANDHELLNMIAEQFFDVL 5128
            Q +YI+    ALC++LKK G DPTALKSF+W+ ++P++      + E+LN ++E F DV+
Sbjct: 64   QCNYITSLVCALCHILKKDGADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFIDVV 123

Query: 5127 IESNTWKVIEVSLVPFSLRSVGISIGMHQNEESAIYQWNGCSVIDGLGGMLNCSYADKES 4948
             E+N+W ++E +L+PF + S   S  + Q+ E   ++ +  S I G    ++    D ++
Sbjct: 124  TETNSWPIVEATLIPFCISSALYSTSVLQHVELDTFEVDRRSFILGSNVPVHEPRMDNQT 183

Query: 4947 MLHLYEPLPLAISCHILTSVLVASLRSCQALQSPLDPMLLNGCS-AETFSRNLLWDICAM 4771
            M   Y  L L ++CH+L  +L A L + Q  Q+  D ++ NG   AE F+  L+WDIC +
Sbjct: 184  MKD-YGFLQLPLACHVLAIMLDAVLCNRQVPQTS-DKVVSNGYQKAEEFTVKLIWDICNL 241

Query: 4770 AIRMLSQGPDHRFHTIHLLLPFILRVFACHSSFQISVQGQMHVLSRDSFFKKIWKCCRAL 4591
            + +ML Q  DHR   I  LLP I      H S +IS+QG    LSR  F  KIWKCC+ L
Sbjct: 242  SEQMLLQSSDHRSCAICHLLPVIFEALISHHSLEISIQGHACNLSRSCFLMKIWKCCKKL 301

Query: 4590 FSRGPLERRDAYRVLSLYISIFHHKERSEDITACNGAGEFDMRTEQEFWDEIKRGLVDKE 4411
            FS G LERRDAYR+LSLY   F H E       C+   EFD++ ++ FWDEIKRGLVDKE
Sbjct: 302  FSFGTLERRDAYRILSLYFCFFPHNEELGGAGMCDDGEEFDIKADKIFWDEIKRGLVDKE 361

Query: 4410 GFVRKQSLDMLKISLSEHNGRQCYTDISEKHLHETSLTSLGLTKREQWAEKEAKSLGVGQ 4231
              VRKQSL +LK +LS+ NGR   T +S+           G+TKRE+WA KEAKSLGVGQ
Sbjct: 362  SSVRKQSLHILKKALSK-NGRGSPTTVSKTISSGKDSNVQGITKRERWANKEAKSLGVGQ 420

Query: 4230 ICNLNDTLSNG-QQRWNAFLLLYEMLEEYGTHLVEAAWNHQISMLLLFPCLERPYSNDIS 4054
            IC+ N   +N  QQ+W AF+LLYEMLEEYG+HLVEAAW+HQIS+LL  P     + +  S
Sbjct: 421  ICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQISLLLQHPT-STEFDSFSS 479

Query: 4053 GVHQIQMETLEGMFSWIAILWERGLCHDNPQVRCLIMQSFLNIDWKDHGICVELVPESFI 3874
            GVHQ Q+E    ++SW++ILW RG  HDNP VRCLIMQ FL I+W+D   C++ +PE+FI
Sbjct: 480  GVHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLTIEWRDKVPCLKSLPETFI 539

Query: 3873 IGPFILGLNDTVHHKEFGVKGVYSSKTIEDAITFVSQFCKHFHLRERIAFMCRLASLAKQ 3694
            IGPFI  LND V HK+FG+KG+YSSKT+E A  FV Q+      R R+ F+ +L SLA++
Sbjct: 540  IGPFIEALNDPVQHKDFGLKGIYSSKTVEGAARFVCQYTNILDARTRVVFLHQLTSLARK 599

Query: 3693 ESFGRSGLMALTACIASAACGVQWC-----EVCSSDVDQLESTVGRVSRNSKADLLDILK 3529
            +SFGR GL++L+ CIASAA  V +      E  +      +  +   S   K +LLD L+
Sbjct: 600  KSFGRVGLISLSECIASAASIVGFDYNIEGECFNGSSLSSQEDLIPYSLECKLELLDDLR 659

Query: 3528 LVTESCKQHFNLNYRHKVCENVMEAASSVICTCGVPLGTLVHFISTVPRELTDYGGSLRE 3349
             V ES KQHFN +YR +VC   +EAA+SV+CT  + L  ++HF+S +PRE TDYGG LR 
Sbjct: 660  FVVESSKQHFNPSYRLQVCAKALEAAASVLCTSNLALEVVLHFVSALPREATDYGGCLRR 719

Query: 3348 NIQKWFSKCSETLQGSNSFSTRMHVLHSLCDFPERFVENHHSPDTFFTFDDGDLEAWEFE 3169
             +Q W   C     G    ST    + SL +FP+RFV ++HS D   T+DD +LEAWE E
Sbjct: 720  KMQNWLLGC-----GKKCCSTETKFMKSLIEFPKRFVTHNHSSDASVTYDDEELEAWECE 774

Query: 3168 AQRWARVFFLVVTDEHHLELICKFLQNFGTNICEQRNCLEWLPPKFLVLNLTLVQELQIM 2989
            A+RWARV FL V  EHHL+ I  F+ N+G NIC+Q+  LE +  KFL+L +TLVQELQ++
Sbjct: 775  AKRWARVVFLAVKKEHHLKSILTFIHNYGLNICKQKGDLEGIRVKFLILIMTLVQELQLV 834

Query: 2988 KMKSLACGIKVRSNMGSNTGSQMLNTSDRLISTDSFVIFQNFTSTFLSILEELVSFAKSA 2809
            + +   C  K  S     T SQ    SD L   +  +  Q   +   S+  ELVSFA  +
Sbjct: 835  QQQIGHCDYK--SEFDDLTMSQ---PSDNLSYAEPTIFSQKIVNLLPSLQVELVSFATMS 889

Query: 2808 YSTFWCCSVMD-SHLPSSVRGKLGGPSQRRLASCTTNVVLEAILSMKTVASLSSWCAQFK 2632
             S FW     D + LP SV+GKLGGPSQRRL S    +VL A+ S K VAS+ S C QF+
Sbjct: 890  CSIFWSNVKSDETTLPGSVKGKLGGPSQRRLPSSVATLVLLAVTSTKAVASIMSCCRQFQ 949

Query: 2631 SDDSLDFAFTFLWSFSQKVILSPKCDFNTETGAEISLAAYEALVPVLKAVVSSMYPVIFD 2452
               S +    FL +F  K + SP   +++E+GAEI LA YEAL  VL+ +VS        
Sbjct: 950  ILCSSNSGVEFLLTFLLKTVSSPV--YHSESGAEICLATYEALASVLQVLVSEFSSEALR 1007

Query: 2451 LIMTSDKSLLPKAEGRHWIDTLLLCFLRNINELLAVGTLARSRRAILMNWKWLCLNSLLS 2272
             +        P+ EGR  +D+L+L F +++N +L  G L R+RRA+L+ WKW CL SLLS
Sbjct: 1008 FVQDESTIHHPRVEGRPLLDSLILTFHQHVNGILDAGVLVRTRRAVLLKWKWHCLESLLS 1067

Query: 2271 ILHCVIENEVHFGSHTTFFSTASMKCIYSDLIGSLENANESSVLPMLRSVRLVLGLFASG 2092
            I +C ++N +    +  F S A++  I++DL+ SLENA ESSVLPMLR VRL+L LF  G
Sbjct: 1068 IPYCALQNGISLEDNNAFLSEATLLQIFNDLVESLENAGESSVLPMLRLVRLILCLFYKG 1127

Query: 2091 RLGSTVLSFDGLNTEMIWELVKSSWILHVSCNKRRVAHIAALLSSVLHCSLFCDDRMHET 1912
              G  V S +G+N+EM+W LV SSWILHVSCNKRRVAHIA LLSSVLH S F +  MH  
Sbjct: 1128 NSGLLVTSCNGVNSEMMWRLVHSSWILHVSCNKRRVAHIAVLLSSVLHSSAFSEINMH-L 1186

Query: 1911 TDKAQGPYKWFIEKILDEGTKSPRTIRLAALHLTGLWLIYPRTIRYYIKELKLLSLYGSV 1732
            +D   GP KWFIEKIL+EGTKSPRT RLAALHLTG+WL +P TI+YY+KELKLLSLYGS+
Sbjct: 1187 SDGGPGPLKWFIEKILEEGTKSPRTFRLAALHLTGMWLSHPWTIKYYLKELKLLSLYGSI 1246

Query: 1731 XXXXXXXXXXXESPDARTEVSLLVKGSDIELTEAFMNTELYARVSVAVLFHELANLADKL 1552
                       +  D +TEVSLL +  D ELTE F+NTELYARVSVA LFH+LA+LA  +
Sbjct: 1247 AFDEDFEAELTDH-DTQTEVSLLAESPDPELTEVFINTELYARVSVATLFHKLADLA-MV 1304

Query: 1551 GSVKETEDCHAALHAGKSFLLDLLDSVVNDKDLSKELYKKYSGIHRRKVRAWQMICILSR 1372
                E   C+ A+ +G+ FLL+LLDSVVN  DL+KELYKK+S IHRRK+RAWQM+CILSR
Sbjct: 1305 ELSNEYGSCYDAVESGRLFLLELLDSVVNSNDLAKELYKKHSAIHRRKIRAWQMMCILSR 1364

Query: 1371 FVDEDIVQQVTSSLHICLYRNNMPSVRQYLEIFAIQVYLKFPPLVEKQLSPIFRDYNMRP 1192
            FV EDI+QQVT+SLH+CL +NN+PSVRQYLE FAI +YLKFP LV++QL PI +DYNM+P
Sbjct: 1365 FVCEDIIQQVTNSLHVCLSKNNLPSVRQYLETFAISIYLKFPTLVKEQLVPILQDYNMKP 1424

Query: 1191 QA----LSSYVFIATNIILHATEEIIRCRHLNELLPPISPLLTSHHHSLRGFTQLLVYKV 1024
            Q     LSSYVFIATN+ILHA E++ +  HL+ELLP + P LTSHHHSLRGFTQLLVY V
Sbjct: 1425 QVTISVLSSYVFIATNVILHANEDV-QSSHLDELLPSLVPQLTSHHHSLRGFTQLLVYHV 1483

Query: 1023 LLEVVPALDCEDTDIMTLEKRCFKDLKSYLAKNSDCVRLRASMEGFLDAFDSNTSATPTG 844
            L +  PA+    T  M LEKRCF+DLKSYL KN DCVRLRASMEG+L A++  +S TP+G
Sbjct: 1484 LCKFFPAMKFRPTGYMPLEKRCFEDLKSYLEKNPDCVRLRASMEGYLHAYNPVSSVTPSG 1543

Query: 843  IFTARDEGVEFECVPTSLMEQVNMFLNEVREDLRCSMAKDMVIIKNESLTVGENCNGVNI 664
            IF++R + + FECVPTSLMEQV  FLN+VREDLRCSMA D+  IKNES    E  N + I
Sbjct: 1544 IFSSRVKDL-FECVPTSLMEQVLNFLNDVREDLRCSMANDLTAIKNESFKTNEGHNLIGI 1602

Query: 663  SPLAKEERLASQVTKDAFFDFQKKITLSKHERQCKDVTSISGNTELCKPLVELEKEDQLL 484
            S    EE   S++      DFQKK+TLSKHE++  + +S  G+ E  K L ELE EDQLL
Sbjct: 1603 SSDINEENSTSKLPVATSLDFQKKVTLSKHEKKDTETSSYLGSKEAYKFLHELEGEDQLL 1662

Query: 483  NQVLQSRSLAMEKFRSSRQDVILVASLLDRIPNLAGLARTCEVFNASGLTVGDASVVNDK 304
            NQ+L SRSL+ME  R++RQD+ILVASLLDRIPNLAGLARTCEVF ASGL + D +V+NDK
Sbjct: 1663 NQLLHSRSLSMENLRTNRQDIILVASLLDRIPNLAGLARTCEVFKASGLAIADLNVLNDK 1722

Query: 303  QFQLISVTAEKWVPIIEVPVSSMKVFLEKKKQQGFSILGLEQTANSVPLDEYAFPKKMVL 124
            QFQLISVTAEKWVPI+EVPV+SMK+FLEKKK++GFSILGLEQTANSVPLD+YAFPKK VL
Sbjct: 1723 QFQLISVTAEKWVPIVEVPVNSMKLFLEKKKREGFSILGLEQTANSVPLDQYAFPKKTVL 1782

Query: 123  VVGREKEGIPVDIIHILDACIEIPQLGVVRSLNVHVSGAIA 1
            V+GREKEGIPVDIIHILDAC+EIPQLGVVRSLNVHVSGAIA
Sbjct: 1783 VLGREKEGIPVDIIHILDACVEIPQLGVVRSLNVHVSGAIA 1823


>ref|XP_004163683.1| PREDICTED: uncharacterized LOC101213211 [Cucumis sativus]
          Length = 1833

 Score = 1821 bits (4716), Expect = 0.0
 Identities = 993/1841 (53%), Positives = 1258/1841 (68%), Gaps = 15/1841 (0%)
 Frame = -2

Query: 5478 IVDSLTKSFKSVPCAAVPSILDCIXXXXXXXXXXXXXXXLNAFSELIKE---DHGHSDGS 5308
            +  SL++SF+ VP  AVP+ILDC+               L  F + I +     G  D  
Sbjct: 4    VFSSLSESFRRVPPMAVPAILDCLFASTGLSSSELFDSLLETFPKTIDDATTKEGKLDAD 63

Query: 5307 QSSYISPFTTALCYLLKKSGTDPTALKSFVWRGYIPVMKIINANDHELLNMIAEQFFDVL 5128
            Q +YI+    ALC++LKK G DPTALKSF+W+ ++P++      + E+LN ++E F DV+
Sbjct: 64   QCNYITSLVCALCHILKKDGADPTALKSFIWKSFVPLINKTATLNREMLNQVSESFIDVV 123

Query: 5127 IESNTWKVIEVSLVPFSLRSVGISIGMHQNEESAIYQWNGCSVIDGLGGMLNCSYADKES 4948
             E+N+W ++E +L+PF + S   S  + Q+ E   ++ +  S I G    ++    D ++
Sbjct: 124  TETNSWPIVEATLIPFCISSALYSTSVLQHVELDTFEVDRRSFILGSNVPVHEPRMDNQT 183

Query: 4947 MLHLYEPLPLAISCHILTSVLVASLRSCQALQSPLDPMLLNGCS-AETFSRNLLWDICAM 4771
            M   Y  L L ++CH+L  +L A L + Q  Q+  D ++ NG   AE F+  L+WDIC +
Sbjct: 184  MKD-YGFLQLPLACHVLAIMLDAVLCNRQVPQTS-DKVVSNGYQKAEEFTVKLIWDICNL 241

Query: 4770 AIRMLSQGPDHRFHTIHLLLPFILRVFACHSSFQISVQGQMHVLSRDSFFKKIWKCCRAL 4591
            + +ML Q  DHR   I  LLP I      H S +IS+QG    LSR  F  KIWKCC+ L
Sbjct: 242  SEQMLLQSSDHRSCAICHLLPVIFEALISHHSLEISIQGHACNLSRSCFLMKIWKCCKKL 301

Query: 4590 FSRGPLERRDAYRVLSLYISIFHHKERSEDITACNGAGEFDMRTEQEFWDEIKRGLVDKE 4411
            FS G LERRDAYR+LSLY   F H E       C+   EFD++ ++ FWDEIKRGLVDKE
Sbjct: 302  FSFGTLERRDAYRILSLYFCFFPHNEELGGAGMCDDGEEFDIKADKIFWDEIKRGLVDKE 361

Query: 4410 GFVRKQSLDMLKISLSEHNGRQCYTDISEKHLHETSLTSLGLTKREQWAEKEAKSLGVGQ 4231
              VRKQSL +LK +LS+ NGR   T +S+           G+TKRE+WA KEAKSLGVGQ
Sbjct: 362  SSVRKQSLHILKKALSK-NGRGSPTTVSKTISSGKDSNVQGITKRERWANKEAKSLGVGQ 420

Query: 4230 ICNLNDTLSNG-QQRWNAFLLLYEMLEEYGTHLVEAAWNHQISMLLLFPCLERPYSNDIS 4054
            IC+ N   +N  QQ+W AF+LLYEMLEEYG+HLVEAAW+HQIS+LL  P     + +  S
Sbjct: 421  ICSQNKIATNSRQQKWEAFILLYEMLEEYGSHLVEAAWSHQISLLLQHPT-STEFDSFSS 479

Query: 4053 GVHQIQMETLEGMFSWIAILWERGLCHDNPQVRCLIMQSFLNIDWKDHGICVELVPESFI 3874
            GVHQ Q+E    ++SW++ILW RG  HDNP VRCLIMQ FL I+W+D   C++ +PE+FI
Sbjct: 480  GVHQNQIEMSGEIYSWLSILWVRGFHHDNPLVRCLIMQFFLTIEWRDKVPCLKSLPETFI 539

Query: 3873 IGPFILGLNDTVHHKEFGVKGVYSSKTIEDAITFVSQFCKHFHLRERIAFMCRLASLAKQ 3694
            IGPFI  LND V HK+FG+KG+YSSKT+E A  FV Q+      R R+ F+ +L SLA++
Sbjct: 540  IGPFIEALNDPVQHKDFGLKGIYSSKTVEGAARFVCQYTNILDARTRVVFLHQLTSLARK 599

Query: 3693 ESFGRSGLMALTACIASAACGVQWC-----EVCSSDVDQLESTVGRVSRNSKADLLDILK 3529
            +SFGR GL++L+ CIASAA  V +      E  +      +  +   S   K +LLD L+
Sbjct: 600  KSFGRVGLISLSECIASAASIVGFDYNIEGECFNGSSLSSQEDLIPYSLECKLELLDDLR 659

Query: 3528 LVTESCKQHFNLNYRHKVCENVMEAASSVICTCGVPLGTLVHFISTVPRELTDYGGSLRE 3349
             V ES KQHFN +Y  +VC   +EAA+SV+CT  + L  ++HF+S +PRE TDYGG LR 
Sbjct: 660  FVVESSKQHFNPSYLLQVCAKALEAAASVLCTSNLALEVVLHFVSALPREATDYGGCLRR 719

Query: 3348 NIQKWFSKCSETLQGSNSFSTRMHVLHSLCDFPERFVENHHSPDTFFTFDDGDLEAWEFE 3169
             +Q W   C     G    ST    + SL +FP+RFV ++HS D   T+DD +LEAWE E
Sbjct: 720  KMQNWLLGC-----GKKCCSTETKFMKSLIEFPKRFVTHNHSSDASVTYDDEELEAWECE 774

Query: 3168 AQRWARVFFLVVTDEHHLELICKFLQNFGTNICEQRNCLEWLPPKFLVLNLTLVQELQIM 2989
            A+RWARV FL V  EHHL+ I  F+ N+G NIC+Q+  LE +  KFL+L +TLVQELQ++
Sbjct: 775  AKRWARVVFLAVKKEHHLKSILTFIHNYGLNICKQKGDLEGIRVKFLILIMTLVQELQLV 834

Query: 2988 KMKSLACGIKVRSNMGSNTGSQMLNTSDRLISTDSFVIFQNFTSTFLSILEELVSFAKSA 2809
            + +   C  K  S     T SQ    SD L   +  +  Q   +   S+  ELVSFA  +
Sbjct: 835  QQQIGHCDYK--SEFDDLTMSQ---PSDNLSYAEPTIFSQKIVNLLPSLQVELVSFATMS 889

Query: 2808 YSTFWCCSVMD-SHLPSSVRGKLGGPSQRRLASCTTNVVLEAILSMKTVASLSSWCAQFK 2632
             S FW     D + LP SV+GKLGGPSQRRL S    +VL A+ S K VAS+ S C QF+
Sbjct: 890  CSIFWSNVKSDETTLPGSVKGKLGGPSQRRLPSSVATLVLLAVTSTKAVASIMSCCRQFQ 949

Query: 2631 SDDSLDFAFTFLWSFSQKVILSPKCDFNTETGAEISLAAYEALVPVLKAVVSSMYPVIFD 2452
               S +    FL +F  K + SP   +++E+GAEI LA YEAL  VL+ +VS        
Sbjct: 950  ILCSSNSGVEFLLTFLLKTVSSPV--YHSESGAEICLATYEALASVLQVLVSEFSSEALR 1007

Query: 2451 LIMTSDKSLLPKAEGRHWIDTLLLCFLRNINELLAVGTLARSRRAILMNWKWLCLNSLLS 2272
             +        P+ EGR  +D+L+L F +++N +L  G L R+RRA+L+ WKW CL SLLS
Sbjct: 1008 FVQDESTIHHPRVEGRPLLDSLILTFHQHVNGILDAGVLVRTRRAVLLKWKWHCLESLLS 1067

Query: 2271 ILHCVIENEVHFGSHTTFFSTASMKCIYSDLIGSLENANESSVLPMLRSVRLVLGLFASG 2092
            I +C ++N +    +  F S A++  I++DL+ SLENA ESSVLPMLR VRL+L LF  G
Sbjct: 1068 IPYCALQNGISLEDNNAFLSEATLLQIFNDLVESLENAGESSVLPMLRLVRLILCLFYKG 1127

Query: 2091 RLGSTVLSFDGLNTEMIWELVKSSWILHVSCNKRRVAHIAALLSSVLHCSLFCDDRMHET 1912
              G  V S +G+N+EM+W LV SSWILHVSCNKRRVAHIA LLSSVLH S F +  MH  
Sbjct: 1128 NSGLLVTSCNGVNSEMMWRLVHSSWILHVSCNKRRVAHIAVLLSSVLHSSAFSEINMH-L 1186

Query: 1911 TDKAQGPYKWFIEKILDEGTKSPRTIRLAALHLTGLWLIYPRTIRYYIKELKLLSLYGSV 1732
            +D   GP KWFIEKIL+EGTKSPRT RLAALHLTG+WL +P TI+YY+KELKLLSLYGS+
Sbjct: 1187 SDGGPGPLKWFIEKILEEGTKSPRTFRLAALHLTGMWLSHPWTIKYYLKELKLLSLYGSI 1246

Query: 1731 XXXXXXXXXXXESPDARTEVSLLVKGSDIELTEAFMNTELYARVSVAVLFHELANLADKL 1552
                       +  D +TEVSLL +  D ELTE F+NTELYARVSVA LFH+LA+LA  +
Sbjct: 1247 AFDEDFEAELTDH-DTQTEVSLLAESPDPELTEVFINTELYARVSVATLFHKLADLA-MV 1304

Query: 1551 GSVKETEDCHAALHAGKSFLLDLLDSVVNDKDLSKELYKKYSGIHRRKVRAWQMICILSR 1372
                E   C+ A+ +G+ FLL+LLDSVVN  DL+KELYKK+S IHRRK+RAWQM+CILSR
Sbjct: 1305 ELSNEYGSCYDAVESGRLFLLELLDSVVNSNDLAKELYKKHSAIHRRKIRAWQMMCILSR 1364

Query: 1371 FVDEDIVQQVTSSLHICLYRNNMPSVRQYLEIFAIQVYLKFPPLVEKQLSPIFRDYNMRP 1192
            FV EDI+QQVT+SLH+CL +NN+PSVRQYLE FAI +YLKFP LV++QL PI +DYNM+P
Sbjct: 1365 FVCEDIIQQVTNSLHVCLSKNNLPSVRQYLETFAISIYLKFPTLVKEQLVPILQDYNMKP 1424

Query: 1191 QA----LSSYVFIATNIILHATEEIIRCRHLNELLPPISPLLTSHHHSLRGFTQLLVYKV 1024
            Q     LSSYVFIATN+ILHA E++ +  HL+ELLP + P LTSHHHSLRGFTQLLVY V
Sbjct: 1425 QVTISVLSSYVFIATNVILHANEDV-QSSHLDELLPSLVPQLTSHHHSLRGFTQLLVYHV 1483

Query: 1023 LLEVVPALDCEDTDIMTLEKRCFKDLKSYLAKNSDCVRLRASMEGFLDAFDSNTSATPTG 844
            L +  PA+    T  M LEKRCF+DLKSYL KN DCVRLRASMEG+L A++  +S TP+G
Sbjct: 1484 LCKFFPAMKFRPTGYMPLEKRCFEDLKSYLEKNPDCVRLRASMEGYLHAYNPVSSVTPSG 1543

Query: 843  IFTARDEGVEFECVPTSLMEQVNMFLNEVREDLRCSMAKDMVIIKNESLTVGENCNGVNI 664
            IF++R + + FECVPTSLMEQV  FLN+VREDLRCSMA D+  IKNES    E  N + I
Sbjct: 1544 IFSSRVKDL-FECVPTSLMEQVLNFLNDVREDLRCSMANDLTAIKNESFKTNEGHNLIGI 1602

Query: 663  SPLAKEERLASQVTKDAFFDFQKKITLSKHERQCKDVTSISGNTELCKPLVELEKEDQLL 484
            S    EE   S++      DFQKK+TLSKHE++  + +S  G+ E  K L ELE EDQLL
Sbjct: 1603 SSDINEENSTSKLPVATSLDFQKKVTLSKHEKKDTETSSYLGSKEAYKFLHELEGEDQLL 1662

Query: 483  NQVLQSRSLAMEKFRSSRQDVILVASLLDRIPNLAGLARTCEVFNASGLTVGDASVVNDK 304
            NQ+L SRSL+ME  R++RQD+ILVASLLDRIPNLAGLARTCEVF ASGL + D +V+NDK
Sbjct: 1663 NQLLHSRSLSMENLRTNRQDIILVASLLDRIPNLAGLARTCEVFKASGLAIADLNVLNDK 1722

Query: 303  QFQLISVTAEKWVPIIEVPVSSMKVFLEKKKQQGFSILGLEQTANSVPLDEYAFPKKMVL 124
            QFQLISVTAEKWVPI+EVPV+SMK+FLEKKK++GFSILGLEQTANSVPLD+YAFPKK VL
Sbjct: 1723 QFQLISVTAEKWVPIVEVPVNSMKLFLEKKKREGFSILGLEQTANSVPLDQYAFPKKTVL 1782

Query: 123  VVGREKEGIPVDIIHILDACIEIPQLGVVRSLNVHVSGAIA 1
            V+GREKEGIPVDIIHILDAC+EIPQLGVVRSLNVHVSGAIA
Sbjct: 1783 VLGREKEGIPVDIIHILDACVEIPQLGVVRSLNVHVSGAIA 1823


>ref|NP_193496.1| tRNA/rRNA methyltransferase (SpoU) family protein [Arabidopsis
            thaliana] gi|332658520|gb|AEE83920.1| tRNA/rRNA
            methyltransferase (SpoU) family protein [Arabidopsis
            thaliana]
          Length = 1850

 Score = 1703 bits (4410), Expect = 0.0
 Identities = 952/1883 (50%), Positives = 1243/1883 (66%), Gaps = 57/1883 (3%)
 Frame = -2

Query: 5478 IVDSLTKSFKSVPCAAVPSILDCIXXXXXXXXXXXXXXXLNAFSELIKEDHGHS---DGS 5308
            ++ SL+ SFK VP AA+P+ LDC+               +  F   +++        D  
Sbjct: 5    VITSLSLSFKQVPPAAIPAFLDCVLSSTGVSPSTLFESLIEQFPFRLEDTVNGDKRFDSD 64

Query: 5307 QSSYISPFTTALCYLLKKSG----TDPTALKSFVWRGYIPVMKIINANDHELLNMIAEQF 5140
              ++I+     LC+LLK  G     +  AL+ FVWR +IP+MK++ A D ++LN I E F
Sbjct: 65   DCNHIASLVAGLCHLLKNFGFVAADNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIVESF 124

Query: 5139 FDVLIESNTWKVIEVSLVPFSLRSVGISIGMHQNEESAIYQWNGCSVIDGLGGMLNCSYA 4960
            FDV+IE+N   ++ VSLVPF LRSVG S+GM Q+EES   +W    + D L    N    
Sbjct: 125  FDVVIETNVLDMLGVSLVPFLLRSVGFSMGMRQHEESDFIKWGDLCLRDSL----NTIDM 180

Query: 4959 DKESMLHLYEPLPLAISCHILTSVLVASLRSCQALQSPLDPMLLNGCSAETFSRNLLWDI 4780
            D+  +  L    P+ +SCH+L  +L A+ +S QA               E+F+  +LWD+
Sbjct: 181  DENYIAQLSGSFPIPLSCHLLNLILNAAFQSHQAAPK-----------VESFAAGMLWDL 229

Query: 4779 CAMAIRMLSQGPDHRFHTIHLLLPFILRVFACHSSFQISVQGQMHVLSRDSFFKKIWKCC 4600
            C    R+LSQ  +HR   +  LLP I + F+  SS +IS QG + +LSR+ F K+IW+CC
Sbjct: 230  CNTTERLLSQSVEHRSCAVSFLLPAIFKAFSSQSSLKISHQGNLFILSRNGFIKRIWECC 289

Query: 4599 RALFSRGPLERRDAYRVLSLYISIFHHKERSEDITACNGAGEFDMRTEQEFWDEIKRGLV 4420
            + LFS G +ERRDAY VLSL +S     + +E   +   A +FD+R+EQEFWDEIK GLV
Sbjct: 290  KKLFSVGSIERRDAYSVLSLCLSSGSWTDGTESFVSEKDAVQFDLRSEQEFWDEIKIGLV 349

Query: 4419 DKEGFVRKQSLDMLKISLSEHNGRQCYTDISEKHLHETSLTSLGLTKREQWAEKEAKSLG 4240
              E  VRKQSL +LK  LS     +    ISEK     S+    +T++E WAEKEAKSLG
Sbjct: 350  VDESLVRKQSLHILKSVLSIIEVSET---ISEKKPEGNSVNR-SMTRKETWAEKEAKSLG 405

Query: 4239 VGQICNLNDTLSNGQQRWNAFLLLYEMLEEYGTHLVEAAWNHQISMLLLFPC-LERPYSN 4063
            VG++    D+    QQ W AFLLLYEMLEEYGTHLVEAAW++QI +L+      +    +
Sbjct: 406  VGELYGSVDSGLTSQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGTLKS 465

Query: 4062 DISGVHQIQMETLEG---MFSWIAILWERGLCHDNPQVRCLIMQSFLNIDWKDHGICVEL 3892
            D +  H   MET +    +F+W+ +LW RG  HDNP VRC +M+SF  I+W+ +  C + 
Sbjct: 466  DCNNSHHGHMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWRRYKTCTQS 525

Query: 3891 VPESFIIGPFILGLNDTVHHKEFGVKGVYSSKTIEDAITFVSQFCKHFHLRERIAFMCRL 3712
            + ++F++GPFI GLND  HHK+FG+KG+Y+S+TIE A  +VS +    + R R+ F+  L
Sbjct: 526  MSQTFVLGPFIEGLNDPTHHKDFGLKGIYTSRTIEGAAQYVSAYTSCLNPRNRVGFLINL 585

Query: 3711 ASLAKQESFGRSGLMALTACIASAACGVQW--------CEVCSSDVDQLESTVGRVSRNS 3556
            ASLAK++SF R+G MAL  CI S A  V           E   S   Q ES+ G +S++ 
Sbjct: 586  ASLAKKQSFCRAGFMALVQCIVSTAYVVGGYGDKEMGHLEDKFSGTAQ-ESSCGHLSQDD 644

Query: 3555 KADLLDILKLVTESCKQHFNLNYRHK---------------------VCENVMEAASSVI 3439
               +LD+LK V ES +QHFN  YR +                     V + V+E A+SV+
Sbjct: 645  MTHILDVLKFVAESSRQHFNHKYRIRASLTILNTLKFLLLIVLFHFLVYQKVLETAASVV 704

Query: 3438 CTCGVPLGTLVHFISTVPRELTDYGGSLRENIQKWFSKCSETLQGSNSFSTR-MHVLHSL 3262
              C VPLGTL+ F+S +PRE TD+ G LR+ + +W   C+   + SNS  T    +L SL
Sbjct: 705  NPCNVPLGTLLQFVSAIPREFTDHDGLLRKMMLEWLQGCNR--KTSNSLCTDGTRLLASL 762

Query: 3261 CDFPERFVENHHSPDTFFTFDDGDLEAWEFEAQRWARVFFLVVTDEHHLELICKFLQNFG 3082
             ++ + F       D   +FDD DLEAW+ + +RWARVFFL++  E HL  I  F+QN G
Sbjct: 763  YEYLKGFTS-----DNVESFDDEDLEAWDSQTKRWARVFFLMINKEEHLTDIIMFVQNNG 817

Query: 3081 TNICEQRNCLEWLPPKFLVLNLTLVQELQIMK--MKSLACGIKVRSNMGSN--TGSQMLN 2914
             +  +++N L+  P KFL+  L+++ ELQ M+  +  L+  +K +S +GS+  TG Q++ 
Sbjct: 818  LSFFQEKNHLKRAPAKFLIFILSMLLELQNMQDGISELSSSVKSKSGIGSDEQTGKQIV- 876

Query: 2913 TSDRLISTDSFVIFQNFTSTFLSILEELVSFAKSAYSTFWC-CSVMDSHLPSSVRGKLGG 2737
                    D+  I + F    LSIL+EL+ FA S+ S FW   +V +  LP SV GKLGG
Sbjct: 877  -------VDASSIKKKFAVVLLSILKELIPFADSSCSIFWSHTTVENGALPGSVIGKLGG 929

Query: 2736 PSQRRLASCTTNVVLEAILSMKTVASLSSWCAQFKSD-DSLDFAFTFLWSFSQKVILSPK 2560
            PSQRRL+  TT  VLEA+LS+KT+  +SS+CAQF S    L  A  F W F+Q  I S  
Sbjct: 930  PSQRRLSVPTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALAFFWKFTQHTISSQI 989

Query: 2559 CDFNTETGAEISLAAYEALVPVLKAVVSSMYPVIFDLIMTSDKSLLPKAEGRHWIDTLLL 2380
            C  N+E  AEI LAA+EAL  VL A VS      F+L+  +D +LL   +G  W+   + 
Sbjct: 990  C--NSEAAAEIYLAAFEALASVLNAFVSLCSAGAFNLL-ENDSTLLSMVDGEFWLQVSVP 1046

Query: 2379 CFLRNINELLAVGTLARSRRAILMNWKWLCLNSLLSILHCVIENEVHFGSHTTFFSTASM 2200
             F+RNIN LL  G L RSRRA+L++WKWLC+ SLLS++H +    +      +FFS  ++
Sbjct: 1047 AFVRNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSVMHILDARRIP-EDRKSFFSDDTV 1105

Query: 2199 KCIYSDLIGSLENANESSVLPMLRSVRLVLGLFASGRLGSTVLSFDGLNTEMIWELVKSS 2020
            K I+ D++ SLENA E S LPML+SVRL LG+ ASG+  S++  F G++T+ +W+LVKS 
Sbjct: 1106 KSIFQDIVESLENAGEGSALPMLKSVRLALGILASGK--SSLDGFSGVDTQTMWQLVKSC 1163

Query: 2019 WILHVSCNKRRVAHIAALLSSVLHCSLFCDDRMHETTDKAQGPYKWFIEKILDEGTKSPR 1840
            WILH+SC KRRVA IAALLSSVLH SLF +  MH T D+  GP KWF+EK+L+EG KSPR
Sbjct: 1164 WILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHITEDE-HGPLKWFVEKVLEEGQKSPR 1222

Query: 1839 TIRLAALHLTGLWLIYPRTIRYYIKELKLLSLYGSVXXXXXXXXXXXESPDARTEVSLLV 1660
            TIRLAALHL+GLWL+YPRTI+YYIKEL+LL+LYGSV           ++ DARTEVSLL 
Sbjct: 1223 TIRLAALHLSGLWLMYPRTIKYYIKELRLLTLYGSVAFDEDFEAELSDNNDARTEVSLLA 1282

Query: 1659 KGSDIELTEAFMNTELYARVSVAVLFHELANLADKLGSVKETEDCHAALHAGKSFLLDLL 1480
            K  D ELTE F+NTELYARVSVA LF +LANLA  +    + +DC  AL AGK FLL+LL
Sbjct: 1283 KSPDPELTELFINTELYARVSVAGLFQKLANLAYMVEPASQNQDCQDALVAGKLFLLELL 1342

Query: 1479 DSVVNDKDLSKELYKKYSGIHRRKVRAWQMICILSRFVDEDIVQQVTSSLHICLY----- 1315
            D+ V+DKDL+KELYKKYS IHRRK+RAWQMICI+SRFV  DIV QV  S+HICL+     
Sbjct: 1343 DAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVCNDIVGQVMDSVHICLHVSLQE 1402

Query: 1314 ---RNNMPSVRQYLEIFAIQVYLKFPPLVEKQLSPIFRDYNMRPQA--LSSYVFIATNII 1150
               RNN+P+VRQYLE FAI +YLKFP LV++QL PI ++Y+ + Q     + + +  N+I
Sbjct: 1403 QTERNNLPAVRQYLETFAINIYLKFPALVKEQLVPILKNYDSKAQVNLRKTKMIVFANVI 1462

Query: 1149 LHATEEIIRCRHLNELLPPISPLLTSHHHSLRGFTQLLVYKVLLEVVPALDCEDTDIMTL 970
            LHA E+I +  HL ELLPPI PLLTSHHHSLRGF QLLV++VL  + P ++   +  ++L
Sbjct: 1463 LHA-EKIAQQTHLRELLPPILPLLTSHHHSLRGFAQLLVHRVLFRLFPPVESTSSHTISL 1521

Query: 969  EKRCFKDLKSYLAKNSDCVRLRASMEGFLDAFDSNTSATPTGIFTARDEGVEFECVPTSL 790
            EK  F++LKSYL KN DC RLRASMEGFLDA+D +TSATP G+F  R E  EFECVPT L
Sbjct: 1522 EKLSFENLKSYLDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEESEFECVPTCL 1581

Query: 789  MEQVNMFLNEVREDLRCSMAKDMVIIKNESLTVGENCNGVNISPLAKEERLASQVTKDAF 610
            M+ V  FLN+VREDLR SMAKD+V IKNE   + E      I     EERL+    + + 
Sbjct: 1582 MDNVLSFLNDVREDLRASMAKDVVTIKNEGFKIDEEPKRRLIMSTTDEERLS----EPSS 1637

Query: 609  FDFQKKITLSKHERQCKDVTSISGNTELCKPLVELEKEDQLLNQVLQSRSLAMEKFRSSR 430
             DFQ+KITLSKHE+Q    TS+  N E  K L E+EKED+L+ Q+L+SRS+ +E+ +S R
Sbjct: 1638 LDFQRKITLSKHEKQDASSTSVLRNGETYKRLFEMEKEDELVTQLLRSRSMEVERLKSGR 1697

Query: 429  QDVILVASLLDRIPNLAGLARTCEVFNASGLTVGDASVVNDKQFQLISVTAEKWVPIIEV 250
            Q +ILVASL+DRIPNLAGLARTCEVF AS L V DAS+++DKQFQLISVTAEKWVPI+EV
Sbjct: 1698 QSLILVASLVDRIPNLAGLARTCEVFKASSLAVADASIIHDKQFQLISVTAEKWVPIMEV 1757

Query: 249  PVSSMKVFLEKKKQQGFSILGLEQTANSVPLDEYAFPKKMVLVVGREKEGIPVDIIHILD 70
            PV+S+K+FLEKKK++GFSILGLEQTANSV LD+Y FPKK VLV+GREKEGIPVDIIHILD
Sbjct: 1758 PVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEGIPVDIIHILD 1817

Query: 69   ACIEIPQLGVVRSLNVHVSGAIA 1
            ACIEIPQLGVVRSLNVHVSGAIA
Sbjct: 1818 ACIEIPQLGVVRSLNVHVSGAIA 1840


>ref|XP_002524359.1| RNA binding protein, putative [Ricinus communis]
            gi|223536320|gb|EEF37970.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 1744

 Score = 1690 bits (4377), Expect = 0.0
 Identities = 897/1501 (59%), Positives = 1101/1501 (73%), Gaps = 27/1501 (1%)
 Frame = -2

Query: 4422 VDKEGFVRKQSLDMLKISLSEHNGRQCYTDISEKHLHETSLTSLGLTKREQWAEKEAKSL 4243
            VD E  VRKQSL +LK  L    G Q  +  +EK   E      G+TKR  WA+KEAKSL
Sbjct: 257  VDAESLVRKQSLHILKRVLQLGAGTQSNSPNTEKKSQEKYSIPNGMTKRAIWADKEAKSL 316

Query: 4242 GVGQICNLNDTLSNGQQRWNAFLLLYEMLEEYGTHLVEAAWNHQISMLLLFPCLERPYSN 4063
            GVG++CN  D+  +G+Q+W AF+LLYEMLEEYGTHLVEAAW HQ+++LL F      ++N
Sbjct: 317  GVGKLCNSMDSPLDGRQQWEAFILLYEMLEEYGTHLVEAAWEHQVTLLLQFSVSYDNFAN 376

Query: 4062 DISGVHQIQMETLEGMFSWIAILWERGLCHDNPQVRCLIMQSFLNIDWKDHGICVELVPE 3883
             I G+ Q Q   L  +FSW+ ILW+ G  HDNPQVRCLIMQSFL I+W  +    + VPE
Sbjct: 377  SICGIQQNQTAVLGEVFSWLTILWQLGFRHDNPQVRCLIMQSFLGIEWMKYHDAAKSVPE 436

Query: 3882 SFIIGPFILGLNDTVHHKEFGVKGVYSSKTIEDAITFVSQFCKHFHLRERIAFMCRLASL 3703
            SFI+G F+ GLND VHHK+FGVKGVY+S+TIE A  F+ Q+ ++ + R+ I F+  LAS+
Sbjct: 437  SFILGSFVEGLNDPVHHKDFGVKGVYTSRTIEAAARFLCQYTRYLNARKEIVFLHSLASV 496

Query: 3702 AKQESFGRSGLMALTACIASAACGV--------QWCEVCSSDVDQLESTVGRVSRNSKAD 3547
            AK +SFGR+GLM L  CIASAACGV        +W +    D   L+S+  +V  N K D
Sbjct: 497  AKHQSFGRAGLMGLAECIASAACGVGLRDGNEAEWTKDALCDEVWLDSSSKKVHIN-KTD 555

Query: 3546 LLDILKLVTESCKQHFNLNYRHKV--------------CENVMEAASSVICTCGVPLGTL 3409
            LLD+L+ V ES KQHFN  YR +V              CE V+ AA+SV+ T  VPL  L
Sbjct: 556  LLDVLRYVIESSKQHFNPKYRFRVLNTIIVIPFVIFAVCEKVLGAATSVVSTVDVPLEVL 615

Query: 3408 VHFISTVPRELTDYGGSLRENIQKWFSKCSETLQGSNSFSTRMHVLHSLCDFPERFVENH 3229
            +HF+ST+PRE TDYGG LR  +Q+W     +       FS+ + +L SL +FPERF  + 
Sbjct: 616  LHFVSTLPREFTDYGGPLRVKMQEWLLGVDK-----KHFSSEIQLLKSLQEFPERFTSSQ 670

Query: 3228 HSPDTFFTFDDGDLEAWEFEAQRWARVFFLVVTDEHHLELICKFLQNFGTNICEQRNCLE 3049
            H  D F +FDD DL+AW+ E +RWARV FLV+ +E+HL  I KFL+N G +IC+Q     
Sbjct: 671  HVVDAFVSFDDEDLDAWDSEVKRWARVLFLVIKEENHLVPIFKFLRNCGVDICKQCKHAG 730

Query: 3048 WLPPKFLVLNLTLVQELQIMKMKSLACGIKVRSNMGSNTGSQMLNTSDRLISTDSFVIFQ 2869
            W P KFLVL + L+ E++I+  + +  G K+RSN    + + +L T D+L S ++  I +
Sbjct: 731  WSPVKFLVLTVNLIAEIRILWEREVERGFKIRSN----SENSLLRTIDQLGSEEASAINE 786

Query: 2868 NFTSTFLSILEELVSFAKSAYSTFWCCSVMDSHLPSSVRGKLGGPSQRRLASCTTNVVLE 2689
             F+  FLSILEELVSFA ++ S FW   V D+ LPSSVRGKLGGPSQRRL+S T   VLE
Sbjct: 787  KFSDLFLSILEELVSFASTSCSIFWTSFVKDTDLPSSVRGKLGGPSQRRLSSSTATAVLE 846

Query: 2688 AILSMKTVASLSSWCAQFKSDDSLDFAFTFLWSFSQKVILSPKCDFNTETGAEISLAAYE 2509
            A+ S+ +VAS++SWC+ FK+D  L FA++F+W F  K   +    ++TE+GAE+ LAAYE
Sbjct: 847  AVCSLPSVASVTSWCSLFKNDVQLKFAWSFMWKFFLKT--NSSLTYDTESGAEVCLAAYE 904

Query: 2508 ALVPVLKAVVSSMYPVIFDLIMTSDKSLLPKAEGRHWIDTLLLCFLRNINELLAVGTLAR 2329
            AL PVL+A+V +  P+  DLI  SDKS    AE + W+D L+L FL+NIN LLAVG L R
Sbjct: 905  ALAPVLRALVFTFSPLALDLIRDSDKSS-SSAEEKAWLDQLVLSFLQNINNLLAVGVLVR 963

Query: 2328 SRRAILMNWKWLCLNSLLSILHCVIENEVHFGSHTTFFSTASMKCIYSDLIGSLENANES 2149
            SRRA+L+NWKWLCL SLLSI H   EN  H   +  FFS A+++ I+SDL+ SLENA E 
Sbjct: 964  SRRAVLLNWKWLCLESLLSIPHYAFENGPHLVDNRLFFSEAAIRLIFSDLVESLENAGEG 1023

Query: 2148 SVLPMLRSVRLVLGLFASGRLGSTVLSFDGLNTEMIWELVKSSWILHVSCNKRRVAHIAA 1969
            SVLPMLRS+RL  GL ASG  GS V S +G++ +M+W LV+SSW+LHVS NKRRVA IAA
Sbjct: 1024 SVLPMLRSIRLTFGLLASGNSGSLVSSCNGVDAQMMWHLVRSSWMLHVSNNKRRVAAIAA 1083

Query: 1968 LLSSVLHCSLFCDDRMHETTDKAQGPYKWFIEKILDEGTKSPRTIRLAALHLTGLWLIYP 1789
            LLSSVLH S+F D+ MH T +   GP KWF+E IL EGTKSPRTIRLAALHLTGLWL  P
Sbjct: 1084 LLSSVLHASVFADEAMH-TNNNGPGPLKWFVENILVEGTKSPRTIRLAALHLTGLWLSQP 1142

Query: 1788 RTIRYYIKELKLLSLYGSVXXXXXXXXXXXESPDARTEVSLLVKGSDIELTEAFMNTELY 1609
            R ++YYIKELKLL+LYGSV           E+ DARTEVSLL K  D ELTEAF+NTELY
Sbjct: 1143 RMMKYYIKELKLLTLYGSVAFDEDFEAELAENRDARTEVSLLAKCPDSELTEAFINTELY 1202

Query: 1608 ARVSVAVLFHELANLADKLGSVKETEDCHAALHAGKSFLLDLLDSVVNDKDLSKELYKKY 1429
            ARVSVAVL + LA+LA+ +GS  E EDC AAL +GK FLL+LLDS VNDKDL+KELYKKY
Sbjct: 1203 ARVSVAVLLNNLADLANLVGSANENEDCSAALESGKIFLLELLDSAVNDKDLAKELYKKY 1262

Query: 1428 SGIHRRKVRAWQMICILSRFVDEDIVQQVTSSLHICLYRNNMPSVRQYLEIFAIQVYLKF 1249
            SGIHRRK+R WQMIC+LSRFV +DIV +VT SLHI LYRNN+P+VRQYLE FAI +YLKF
Sbjct: 1263 SGIHRRKIRVWQMICVLSRFVTDDIVGKVTCSLHIALYRNNLPAVRQYLETFAINIYLKF 1322

Query: 1248 PPLVEKQLSPIFRDYNMRPQ-----ALSSYVFIATNIILHATEEIIRCRHLNELLPPISP 1084
            P LV +QL PI RDY+MRPQ     ALSSYVFIA NIILH T +  + RHL+ELLPPI P
Sbjct: 1323 PTLVGEQLVPILRDYDMRPQVNITSALSSYVFIAANIILH-TSKAFQSRHLDELLPPILP 1381

Query: 1083 LLTSHHHSLRGFTQLLVYKVLLEVVPALDCEDTDIMTLEKRCFKDLKSYLAKNSDCVRLR 904
            LLTSHHHSLRGFTQLLVY+VL +++  LDC  ++   LEKRCF+DLKSYLAKN DC RLR
Sbjct: 1382 LLTSHHHSLRGFTQLLVYQVLSKILSPLDCGASETTDLEKRCFEDLKSYLAKNPDCRRLR 1441

Query: 903  ASMEGFLDAFDSNTSATPTGIFTARDEGVEFECVPTSLMEQVNMFLNEVREDLRCSMAKD 724
            ASMEG+LDA++   S TPTGIF  R E +EFECVPTSL+E+V  FLN+VREDLRCSMAKD
Sbjct: 1442 ASMEGYLDAYNPIVSGTPTGIFINRVEELEFECVPTSLLEEVLSFLNDVREDLRCSMAKD 1501

Query: 723  MVIIKNESLTVGENCNGVNISPLAKEERLASQVTKDAFFDFQKKITLSKHERQCKDVTSI 544
            ++ IKNES  + EN       P  +   L  ++ ++A  DFQKKIT SKHE++  D +SI
Sbjct: 1502 VITIKNESFKIDEN-------PTCR-RTLPKELLEEASLDFQKKITPSKHEKKDADSSSI 1553

Query: 543  SGNTELCKPLVELEKEDQLLNQVLQSRSLAMEKFRSSRQDVILVASLLDRIPNLAGLART 364
             G+    K L+E+EKED+LL+Q LQSR L ME+ R+SRQ +ILVAS LDR+PNLAGLART
Sbjct: 1554 LGSNAY-KQLLEMEKEDELLDQSLQSRILTMERIRASRQHLILVASFLDRVPNLAGLART 1612

Query: 363  CEVFNASGLTVGDASVVNDKQFQLISVTAEKWVPIIEVPVSSMKVFLEKKKQQGFSILGL 184
            CEVF ASGL + D S+++DKQFQLISVTAEKWVPIIEVPV+S+K FLEKKKQ+G+SILGL
Sbjct: 1613 CEVFRASGLAIADKSILHDKQFQLISVTAEKWVPIIEVPVNSVKQFLEKKKQEGYSILGL 1672

Query: 183  EQTANSVPLDEYAFPKKMVLVVGREKEGIPVDIIHILDACIEIPQLGVVRSLNVHVSGAI 4
            EQTANSV LD++AFPKK VLV+GREKEG+PVDIIHILDACIEIPQLGVVRSLNVHVSGAI
Sbjct: 1673 EQTANSVSLDQFAFPKKTVLVLGREKEGVPVDIIHILDACIEIPQLGVVRSLNVHVSGAI 1732

Query: 3    A 1
            A
Sbjct: 1733 A 1733



 Score =  200 bits (508), Expect = 4e-48
 Identities = 112/258 (43%), Positives = 160/258 (62%), Gaps = 1/258 (0%)
 Frame = -2

Query: 5478 IVDSLTKSFKSVPCAAVPSILDCIXXXXXXXXXXXXXXXLNAFSELIKEDHGHSDGSQSS 5299
            ++ SL++SFK VP +A+P+ILDCI               L+   E IKE+    D S   
Sbjct: 4    LISSLSRSFKKVPLSAIPAILDCILASTGLSPSSLFDSFLHVTKEFIKEEK--LDYSHCD 61

Query: 5298 YISPFTTALCYLLKKSGTDPTALKSFVWRGYIPVMKIINANDHELLNMIAEQFFDVLIES 5119
            Y+     ALC+LLKK G DP +++S +W+ +IP+MK+ +A + E+LN IAE FFDV+  +
Sbjct: 62   YLISMVGALCHLLKKPGADPDSMQSLIWKCFIPLMKMAHALEREMLNQIAESFFDVVNVT 121

Query: 5118 NTWKVIEVSLVPFSLRSVGISIGMHQNEESAIYQWNGCSVIDGLGGMLNCSYADKESMLH 4939
            N+W V+E +LVPF LRS G+++ M QNEES I++W   SV+  L G+++ S  DKE ML 
Sbjct: 122  NSWDVLEATLVPFFLRSAGLAMDMLQNEESDIFEWAQHSVL--LSGLIDDSNLDKEFMLS 179

Query: 4938 LYEPLPLAISCHILTSVLVASLRSCQALQSPLDPMLLNGCS-AETFSRNLLWDICAMAIR 4762
            L    PL ISCH+L  +L ++L+SC A  S  + M+ NG S A+     LLWD+C M+ R
Sbjct: 180  LSGSFPLPISCHVLAIILDSTLQSCNA-ASRTESMVENGSSYAQKLFYKLLWDLCNMSER 238

Query: 4761 MLSQGPDHRFHTIHLLLP 4708
            +L Q  +HR      LLP
Sbjct: 239  LLLQSLEHRSCATGFLLP 256


>ref|XP_002868048.1| tRNA/rRNA methyltransferase family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297313884|gb|EFH44307.1| tRNA/rRNA
            methyltransferase family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1852

 Score = 1681 bits (4352), Expect = 0.0
 Identities = 941/1893 (49%), Positives = 1238/1893 (65%), Gaps = 67/1893 (3%)
 Frame = -2

Query: 5478 IVDSLTKSFKSVPCAAVPSILDCIXXXXXXXXXXXXXXXLNAFSELIKEDHGHS---DGS 5308
            ++ SL+ SFK VP AAVP+ LDC+               +  F   +++        D  
Sbjct: 5    VITSLSLSFKQVPPAAVPAFLDCVLSSTGVSSSTLFESLIEQFPFRLEDTVNGDKRFDSD 64

Query: 5307 QSSYISPFTTALCYLLKKSG----TDPTALKSFVWRGYIPVMKIINANDHELLNMIAEQF 5140
              ++I+     LC+LL+  G     +  AL+ FVWR +IP+MK++ A D ++LN I E F
Sbjct: 65   DCNHIASLVAGLCHLLRNFGFGTADNHNALQLFVWRVFIPLMKMVRAYDLDMLNKIVESF 124

Query: 5139 FDVLIESNTWKVIEVSLVPFSLRSVGISIGMHQNEESAIYQWNGCSVIDGLGGMLNCSYA 4960
            FDV+IE++   V+ VSLVPF LRS+G+S+GM Q+EES   +W    + D L    N +  
Sbjct: 125  FDVVIETS---VLGVSLVPFLLRSIGVSMGMLQHEESDFIKWGDLLLRDSL----NTTNM 177

Query: 4959 DKESMLHLYEPLPLAISCHILTSVLVASLRSCQALQSPLDPMLLNGCSAETFSRNLLWDI 4780
            D+  + +L E  P+ +SCH+L  +L A+ +S QA               E+F+  +LWD+
Sbjct: 178  DENYIANLSESFPIPLSCHLLNLILNAAFQSRQAAPE-----------MESFAAGMLWDL 226

Query: 4779 CAMAIRMLSQGPDHRFHTIHLLLPFILRVFACHSSFQISVQGQMHVLSRDSFFKKIWKCC 4600
            C M  R+LSQ   HR   +  LLP I + F+  SS +I  Q  M++LSR+ F K+IW+CC
Sbjct: 227  CNMTERLLSQSLKHRSCAVSFLLPAIFKAFSSQSSLKILHQENMYILSRNGFKKRIWECC 286

Query: 4599 RALFSRGPLERRDAYRVLSLYISIFHHKERSEDITACNGAGEFDMRTEQEFWDEIKRGLV 4420
            + LFS G +ERRDAY VLSL +S     + +E   +   A EFD+R+EQEFWDEIK GLV
Sbjct: 287  KKLFSVGSIERRDAYSVLSLCLSSGSWTDETESFVSEKEAVEFDLRSEQEFWDEIKIGLV 346

Query: 4419 DKEGFVRKQSLDMLK--ISLSEHNGRQCYTDISEKHLHETSLTSLGLTKREQWAEKEAKS 4246
              E  VRKQSL +LK  +S+SE       +  S +   E +  +  +T+++ WAEKEAKS
Sbjct: 347  VDESLVRKQSLHILKSVLSISE------VSKTSSEKKPEGNSGNRSMTRKDTWAEKEAKS 400

Query: 4245 LGVGQICNLNDTLSNGQQRWNAFLLLYEMLEEYGTHLVEAAWNHQISMLLLFPC-LERPY 4069
            LGVG++    D+    QQ W AFLLLYEMLEEYGTHLVEAAW++QI +L+      +   
Sbjct: 401  LGVGELYGSVDSGLTSQQGWQAFLLLYEMLEEYGTHLVEAAWSNQIDLLIKSSLRYDGTL 460

Query: 4068 SNDISGVHQIQMETLEG---MFSWIAILWERGLCHDNPQVRCLIMQSFLNIDWKDHGICV 3898
             +D +  H   MET +    +F+W+ +LW RG  HDNP VRC +M+SF  I+W+ +  C 
Sbjct: 461  KSDCNNSHHGHMETPDEEAKIFNWLEVLWNRGFRHDNPLVRCTVMESFFGIEWRRYKTCT 520

Query: 3897 ELVPESFIIGPFILGLNDTVHHKEFGVKGVYSSKTIEDAITFVSQFCKHFHLRERIAFMC 3718
            + + ++F++GPFI GLND  HHK+FG+KG+Y+S+TIE A  +V  +    + R R+ F+ 
Sbjct: 521  QSMSQTFVLGPFIEGLNDPTHHKDFGLKGIYTSRTIEGAAQYVCAYTSCLNPRNRVGFLI 580

Query: 3717 RLASLAKQESFGRSGLMALTACIASAA--CGVQWCEVCSSDVDQLESTVGR-----VSRN 3559
             LASLAK++SF R+G MAL  CI S A   G    +      D+   T        +S++
Sbjct: 581  NLASLAKKQSFCRAGFMALVQCIVSTAYVVGGYGDKEMGHLEDKFSGTAHEPSCEHLSQD 640

Query: 3558 SKADLLDILKLVTESCKQHFNLNYR--------------------------------HKV 3475
                +LD+LK V ES +QHFN  Y+                                  V
Sbjct: 641  DMTHILDVLKFVAESSRQHFNHKYQLIIRMWNYNFVASLMILNTLKVLLSIVFFFFHFLV 700

Query: 3474 CENVMEAASSVICTCGVPLGTLVHFISTVPRELTDYGGSLRENIQKWFSKCSETLQGSNS 3295
             + V+E A+S +  C VPLGTL+ F+S +PRE TD+ GSLR+ + +W   C+  +  SNS
Sbjct: 701  YQKVLETAASAVNPCNVPLGTLLQFVSAIPREFTDHDGSLRKMMLEWLQGCNRKI--SNS 758

Query: 3294 FSTR-MHVLHSLCDFPERFVENHHSPDTFFTFDDGDLEAWEFEAQRWARVFFLVVTDEHH 3118
              T    +L SL ++ + F+      D   +FDD DLEAW+ + +RWARV FL++  E +
Sbjct: 759  LCTDGTRLLASLYEYLKGFIS-----DNVESFDDEDLEAWDSQTKRWARVLFLIINKEKY 813

Query: 3117 LELICKFLQNFGTNICEQRNCLEWLPPKFLVLNLTLVQELQIMK--MKSLACGIKVRSNM 2944
            L  I  F+QN G +  +++N LE  P KFL+  L+++ ELQ M+  +  L+  +K +S +
Sbjct: 814  LTDIIMFVQNSGLSFFQEKNHLERTPAKFLIFILSMLLELQNMQDGISELSSSVKRKSCI 873

Query: 2943 GSN--TGSQMLNTSDRLISTDSFVIFQNFTSTFLSILEELVSFAKSAYSTFWC-CSVMDS 2773
            GSN  TG Q++  +          I + F    LSIL+EL+ FA S+ S FW   +V + 
Sbjct: 874  GSNEETGKQIVGNASN--------IKKKFAVVLLSILKELIQFADSSCSIFWSHTTVENG 925

Query: 2772 HLPSSVRGKLGGPSQRRLASCTTNVVLEAILSMKTVASLSSWCAQFKSD-DSLDFAFTFL 2596
             LP SV GKLGGPSQRRL+  TT  VLEA+LS+KT+  +SS+CAQF S    L  A  F 
Sbjct: 926  ALPGSVTGKLGGPSQRRLSIPTTTAVLEAVLSVKTIGLISSYCAQFTSGVGELKLALGFF 985

Query: 2595 WSFSQKVILSPKCDFNTETGAEISLAAYEALVPVLKAVVSSMYPVIFDLIMTSDKSLLPK 2416
            W F+Q  I    C  N+E  AEI LAA+EAL  VL A VS      F+L+  +D +LL  
Sbjct: 986  WKFTQHTISPQIC--NSEAAAEIYLAAFEALAAVLNAFVSLCSAGAFNLL-ENDNTLLTM 1042

Query: 2415 AEGRHWIDTLLLCFLRNINELLAVGTLARSRRAILMNWKWLCLNSLLSILHCVIENEVHF 2236
             +G  W+   +  FL NIN LL  G L RSRRA+L++WKWLC+ SLLS++H +++     
Sbjct: 1043 VDGEFWLQVSVPAFLHNINHLLTAGVLVRSRRAVLLSWKWLCVESLLSVMH-ILDARRTP 1101

Query: 2235 GSHTTFFSTASMKCIYSDLIGSLENANESSVLPMLRSVRLVLGLFASGRLGSTVLSFDGL 2056
            G   +FFS  ++K I+ D++ SLENA E S LPML+SVRL LG+ ASG   S++  F G+
Sbjct: 1102 GDRKSFFSDDTVKSIFQDIVESLENAGEGSALPMLKSVRLALGILASGN--SSLDGFSGV 1159

Query: 2055 NTEMIWELVKSSWILHVSCNKRRVAHIAALLSSVLHCSLFCDDRMHETTDKAQGPYKWFI 1876
            +T+ +W+LVKS WILH+SC KRRVA IAALLSSVLH SLF +  MH   D  QGP KWF+
Sbjct: 1160 DTQTMWQLVKSCWILHISCKKRRVAPIAALLSSVLHSSLFSNKDMHIAED-GQGPLKWFV 1218

Query: 1875 EKILDEGTKSPRTIRLAALHLTGLWLIYPRTIRYYIKELKLLSLYGSVXXXXXXXXXXXE 1696
            EK+L+EG KSPRTIRLAALHL+GLWL+YPRTI+YYI+EL+LL+LYGSV           +
Sbjct: 1219 EKVLEEGQKSPRTIRLAALHLSGLWLMYPRTIKYYIRELRLLTLYGSVAFDEDFEAELSD 1278

Query: 1695 SPDARTEVSLLVKGSDIELTEAFMNTELYARVSVAVLFHELANLADKLGSVKETEDCHAA 1516
            + DARTEVSLL K  D ELTE F+NTELYARVSVA LF +LANLA  +    + + C  A
Sbjct: 1279 NTDARTEVSLLAKSPDPELTELFINTELYARVSVAGLFQKLANLAYMVEPASQNQGCQDA 1338

Query: 1515 LHAGKSFLLDLLDSVVNDKDLSKELYKKYSGIHRRKVRAWQMICILSRFVDEDIVQQVTS 1336
            L AGK FLL+LLD+ V+DKDL+KELYKKYS IHRRK+RAWQMICI+SRFV  DIV QV  
Sbjct: 1339 LVAGKLFLLELLDAAVHDKDLAKELYKKYSAIHRRKIRAWQMICIMSRFVSNDIVGQVMD 1398

Query: 1335 SLHICLY--------RNNMPSVRQYLEIFAIQVYLKFPPLVEKQLSPIFRDYNMRPQALS 1180
            S+HICL+        RNN+P+VRQYLE FAI +YLKFP LV++QL PI ++Y+ + Q  S
Sbjct: 1399 SVHICLHVSLQEQTERNNLPAVRQYLETFAINIYLKFPALVKEQLVPILKNYDSKAQMFS 1458

Query: 1179 SYVFIATNIILHATEEIIRCRHLNELLPPISPLLTSHHHSLRGFTQLLVYKVLLEVVPAL 1000
            S      N+ILHA E+I +  HL ELLPPI PLLTSHHHSLRGF QLLV++VL  + P +
Sbjct: 1459 S-----ANVILHA-EKIAQQTHLRELLPPIIPLLTSHHHSLRGFAQLLVHRVLFRLSPPV 1512

Query: 999  DCEDTDIMTLEKRCFKDLKSYLAKNSDCVRLRASMEGFLDAFDSNTSATPTGIFTARDEG 820
            +   +  ++LEK  F++LKSYL KN DC RLRASMEGFLDA+D +TSATP G+F  R E 
Sbjct: 1513 ESTSSHTISLEKLSFENLKSYLDKNPDCSRLRASMEGFLDAYDPSTSATPAGVFVNRVEE 1572

Query: 819  VEFECVPTSLMEQVNMFLNEVREDLRCSMAKDMVIIKNESLTVGENCNGVNISPLAKEER 640
             EFECVPT LM+ V  FLN+VREDLR SMA D+V IKNE   + E  N   I     EER
Sbjct: 1573 SEFECVPTCLMDNVLSFLNDVREDLRASMANDVVTIKNEGFKIDEGPNRRLIISTTDEER 1632

Query: 639  LASQVTKDAFFDFQKKITLSKHERQCKDVTSISGNTELCKPLVELEKEDQLLNQVLQSRS 460
                +++ +  DFQ+KITLSKHE+Q    TS+  N E  K L E+EKED+L+ Q+L+SRS
Sbjct: 1633 ----ISEPSSLDFQRKITLSKHEKQDASSTSVLRNGETYKRLFEMEKEDELVTQLLRSRS 1688

Query: 459  LAMEKFRSSRQDVILVASLLDRIPNLAGLARTCEVFNASGLTVGDASVVNDKQFQLISVT 280
            + +E+ +S RQ +ILVASL+DRIPNLAGLARTCEVF AS L V DA++++DKQFQLISVT
Sbjct: 1689 MEVERLKSGRQSLILVASLVDRIPNLAGLARTCEVFKASNLAVADANIIHDKQFQLISVT 1748

Query: 279  AEKWVPIIEVPVSSMKVFLEKKKQQGFSILGLEQTANSVPLDEYAFPKKMVLVVGREKEG 100
            AEKWVPI+EVPV+S+K+FLEKKK++GFSILGLEQTANSV LD+Y FPKK VLV+GREKEG
Sbjct: 1749 AEKWVPIMEVPVNSLKLFLEKKKREGFSILGLEQTANSVSLDKYQFPKKTVLVLGREKEG 1808

Query: 99   IPVDIIHILDACIEIPQLGVVRSLNVHVSGAIA 1
            IPVDIIHILDACIEIPQLGVVRSLNVHVSGAIA
Sbjct: 1809 IPVDIIHILDACIEIPQLGVVRSLNVHVSGAIA 1841