BLASTX nr result

ID: Cimicifuga21_contig00014499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014499
         (1186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190191.1| putative F-box/kelch-repeat protein [Arabidopsi...    59   2e-06
ref|NP_181931.1| putative F-box/kelch-repeat protein [Arabidopsi...    58   5e-06

>ref|NP_190191.1| putative F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75180796|sp|Q9LX87.1|FBK74_ARATH RecName:
           Full=Putative F-box/kelch-repeat protein At3g46050
           gi|7798993|emb|CAB90932.1| putative protein [Arabidopsis
           thaliana] gi|332644584|gb|AEE78105.1| putative
           F-box/kelch-repeat protein [Arabidopsis thaliana]
          Length = 370

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 41/138 (29%), Positives = 64/138 (46%)
 Frame = +3

Query: 195 YPEDPYYTAWYLIDPFKDSRDDEPLRLRRFSYIPFGYSRTDFTLVTLGSKIYQIGGFLDS 374
           YP+ P    W+++ P         +  ++   IP    ++  T+V++GSKIY IGGF+D 
Sbjct: 82  YPDCP--PRWFIVSP---------ITKQKLKPIPSVTCQSS-TVVSIGSKIYIIGGFVDG 129

Query: 375 DLEAAVEEVLCFDPSHQLSDSDSSGWQYTGEMKXXXXXXXXXXXXGKLYVFGSANNKGFA 554
                +  + C  PSH        GW+   EM+             K+YV G +++    
Sbjct: 130 HSSRRLIVLDC--PSH--------GWRRLPEMRVPRQNAAADVINDKIYVIGGSSSNNIE 179

Query: 555 PVPWCEVYDPQVGTWEPL 608
              W EVYDP+  TWEP+
Sbjct: 180 --DWGEVYDPKTQTWEPV 195


>ref|NP_181931.1| putative F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75099812|sp|O80573.1|FBK45_ARATH RecName:
           Full=Putative F-box/kelch-repeat protein At2g44030
           gi|3212860|gb|AAC23411.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255269|gb|AEC10363.1|
           putative F-box/kelch-repeat protein [Arabidopsis
           thaliana]
          Length = 380

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 46/178 (25%), Positives = 68/178 (38%), Gaps = 7/178 (3%)
 Frame = +3

Query: 102 KMKKNSTCICVCLK-------GKGLYPGQQVPRKSNIRYPEDPYYTAWYLIDPFKDSRDD 260
           ++ KN TC+ VCL            +   Q P+   I  P  PY       DP  +    
Sbjct: 64  RILKNETCLYVCLNLNNNNNPNPSWFILSQTPKHKLIPLPSLPYP------DPHPNCS-- 115

Query: 261 EPLRLRRFSYIPFGYSRTDFTLVTLGSKIYQIGGFLDSDLEAAVEEVLCFDPSHQLSDSD 440
                               T+V+ GS+IY +GGF+  +  +    VL         D  
Sbjct: 116 --------------------TVVSTGSEIYLLGGFVAKEKRSRRAYVL---------DCK 146

Query: 441 SSGWQYTGEMKXXXXXXXXXXXXGKLYVFGSANNKGFAPVPWCEVYDPQVGTWEPLPE 614
           S  W+   +M+            GK+ V+G  +++    V W E+YDP   TWEP PE
Sbjct: 147 SHQWRRLPKMRIARKEAAANVIDGKINVYGGCSSEYHNSVNWGEIYDPMTQTWEPFPE 204


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