BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014484
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   247   9e-64
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   233   2e-59
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   227   1e-57
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   225   4e-57
ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   210   1e-52

>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  247 bits (630), Expect = 9e-64
 Identities = 115/179 (64%), Positives = 140/179 (78%)
 Frame = -3

Query: 539 PDIKTWTILIQGHCTAGEIDEALKCFTKMSEKNCEPDADLLEVLVNGLCNKGRVDSAYTL 360
           PDIKTWTILIQGHC A E+D+AL CF KM EKNC+ DADLLEVL+NG  ++ R+D AY L
Sbjct: 440 PDIKTWTILIQGHCAAKEVDKALICFAKMMEKNCDADADLLEVLINGFLSQKRIDGAYKL 499

Query: 359 IIEMVGKVNLVPWQATYKNLIYKLLGERKLGEAMNLLRSMKKHNFQPIPEPFVDYISKFG 180
           ++EMV   +LVPWQATYK +I KLLG RKL EA+NLL  MKK N+ P PEPF++YISKFG
Sbjct: 500 LVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLMKKQNYPPFPEPFIEYISKFG 559

Query: 179 MVDDAMELLETLSVRQYPSSSAYFHVLQSFLKEGRQSEALDLLHRCPDHVRNYADILNL 3
            V+DA E L  LS ++YPS SAY HV +SF +EGR+SEA DLL++CP H+R + DI  L
Sbjct: 560 TVEDAGEFLNALSAKKYPSQSAYVHVFESFFQEGRESEAKDLLYKCPHHIRKHPDICKL 618


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  233 bits (593), Expect = 2e-59
 Identities = 111/179 (62%), Positives = 134/179 (74%)
 Frame = -3

Query: 539 PDIKTWTILIQGHCTAGEIDEALKCFTKMSEKNCEPDADLLEVLVNGLCNKGRVDSAYTL 360
           PDIKTWTILIQGHC A E+ +AL C  KM EK+C+PDADLL VL+N   ++ R+D AYTL
Sbjct: 438 PDIKTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADLLAVLINAFLSQKRIDGAYTL 497

Query: 359 IIEMVGKVNLVPWQATYKNLIYKLLGERKLGEAMNLLRSMKKHNFQPIPEPFVDYISKFG 180
            ++MV K  L PWQATYK LI KLL  RKL EA+NLLR MK+HN  P PEPFV YIS+FG
Sbjct: 498 FMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLMKQHNHPPFPEPFVQYISRFG 557

Query: 179 MVDDAMELLETLSVRQYPSSSAYFHVLQSFLKEGRQSEALDLLHRCPDHVRNYADILNL 3
            VDDA + L+ LSV++YPS+SAY +V QSF + GR SEA DLL +CP H+R +  I  L
Sbjct: 558 TVDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAKDLLFKCPHHIRKHPKISEL 616


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  227 bits (578), Expect = 1e-57
 Identities = 107/179 (59%), Positives = 132/179 (73%)
 Frame = -3

Query: 539 PDIKTWTILIQGHCTAGEIDEALKCFTKMSEKNCEPDADLLEVLVNGLCNKGRVDSAYTL 360
           PDIKTWTILIQGHC A E+D AL CF KM EKNC+PDADLL+VL++G  N+ +++ AY L
Sbjct: 433 PDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGFLNQKKLNGAYQL 492

Query: 359 IIEMVGKVNLVPWQATYKNLIYKLLGERKLGEAMNLLRSMKKHNFQPIPEPFVDYISKFG 180
           +IE+  K ++ PWQATYK LI  LL  RKL EA+ LLR MKK N+ P PEPFV YISKFG
Sbjct: 493 LIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPFPEPFVQYISKFG 552

Query: 179 MVDDAMELLETLSVRQYPSSSAYFHVLQSFLKEGRQSEALDLLHRCPDHVRNYADILNL 3
            V DA + L+ LS ++YPS SAY H+  SF  EGR SEA DLL +CP H+R + ++  L
Sbjct: 553 TVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHNEVCKL 611


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  225 bits (573), Expect = 4e-57
 Identities = 107/171 (62%), Positives = 131/171 (76%)
 Frame = -3

Query: 539 PDIKTWTILIQGHCTAGEIDEALKCFTKMSEKNCEPDADLLEVLVNGLCNKGRVDSAYTL 360
           PDIKTWTILIQGH  A ++D+ L C  KM+EKN +PDADLL+VLV G  ++ ++D AYT 
Sbjct: 287 PDIKTWTILIQGHFAANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTF 346

Query: 359 IIEMVGKVNLVPWQATYKNLIYKLLGERKLGEAMNLLRSMKKHNFQPIPEPFVDYISKFG 180
           ++EMV K+ LVPWQATYK LI KLL  RKL EA +LLR MKKHN+ P PEPF  YISKFG
Sbjct: 347 LVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFG 406

Query: 179 MVDDAMELLETLSVRQYPSSSAYFHVLQSFLKEGRQSEALDLLHRCPDHVR 27
            V+DA+   + LSV++YPSS AY  +L SFL+EGR SEA DLL +CP H+R
Sbjct: 407 TVEDAVNFFKVLSVKEYPSSVAYLRMLDSFLREGRDSEARDLLFKCPHHIR 457


>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  210 bits (535), Expect = 1e-52
 Identities = 101/179 (56%), Positives = 126/179 (70%)
 Frame = -3

Query: 539 PDIKTWTILIQGHCTAGEIDEALKCFTKMSEKNCEPDADLLEVLVNGLCNKGRVDSAYTL 360
           PDIKTWTILIQGHC+A E+D+AL CF KM EK C+PDADLL+VL +G  ++ R++ AY L
Sbjct: 439 PDIKTWTILIQGHCSANEVDKALLCFAKMIEKGCDPDADLLDVLADGFLSQKRIEGAYEL 498

Query: 359 IIEMVGKVNLVPWQATYKNLIYKLLGERKLGEAMNLLRSMKKHNFQPIPEPFVDYISKFG 180
           + E+  K  + PWQATYK LI KLLG  K  EA+ LLR MK HN+ P   PFV YISKFG
Sbjct: 499 VAEISRKCRISPWQATYKKLIEKLLGVMKFEEALELLRLMKSHNYPPYHLPFVPYISKFG 558

Query: 179 MVDDAMELLETLSVRQYPSSSAYFHVLQSFLKEGRQSEALDLLHRCPDHVRNYADILNL 3
            V+DA   L+ LSV+ YPS   Y  V +S  +EGR SEA DLL++ P H+R ++ I  L
Sbjct: 559 SVEDAEAFLKALSVKSYPSHIVYVQVFESLFREGRLSEAKDLLYKTPHHIRTHSKICKL 617