BLASTX nr result

ID: Cimicifuga21_contig00014474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014474
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|29...   315   2e-83
ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]      309   1e-81
ref|NP_001050802.1| Os03g0655200 [Oryza sativa Japonica Group] g...   294   3e-77
ref|XP_002464137.1| hypothetical protein SORBIDRAFT_01g013020 [S...   293   7e-77
ref|NP_001150251.1| LOC100283881 [Zea mays] gi|195637818|gb|ACG3...   290   6e-76

>ref|XP_002275569.1| PREDICTED: membrin-11 [Vitis vinifera] gi|296085896|emb|CBI31220.3|
            unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  315 bits (806), Expect = 2e-83
 Identities = 161/221 (72%), Positives = 185/221 (83%)
 Frame = -2

Query: 1073 TLSEIYQSSKRLLIRTRDGXXXXXXXXXXXXXSNGGMDSPELSFSIKRDITQIQSLCVEM 894
            T SEIYQ+SK+LL+RTRDG              +  +DSPEL+F++K+DI+QIQSLCVEM
Sbjct: 7    TFSEIYQNSKKLLLRTRDGLERLERLEFSS---SNPVDSPELAFAVKKDISQIQSLCVEM 63

Query: 893  DRLWRSIGSKPQRDLWKRKVEQVVEEVDSLRESLDKHTQRNQKRAMEAKERAELFQRANG 714
            DRLWRSI +K QRDLWKRKVEQV EE +SL+ESLDK+  R+QKR MEAKERAEL  RANG
Sbjct: 64   DRLWRSISAKSQRDLWKRKVEQVAEESESLKESLDKYFLRHQKRMMEAKERAELLGRANG 123

Query: 713  DSSHVLRIFDEEAQAMQSARNSSLMLEDAYSTGVAILSKYAEQRDLLKRAQRKALDVLNT 534
            DS+HVLRIFDEEAQAMQSARNSS+MLE+AYS GVAIL+KYA+QRD LK A RKALDVLNT
Sbjct: 124  DSAHVLRIFDEEAQAMQSARNSSMMLEEAYSKGVAILTKYADQRDRLKGAHRKALDVLNT 183

Query: 533  TTLSNSVLKLIERRHRVDKWIAYSGMTVTVVVVYAFWRWTH 411
              LSNSVLKLIERR+RVDKWI Y+GM V+VVV+Y FWRW H
Sbjct: 184  VGLSNSVLKLIERRNRVDKWIKYTGMVVSVVVLYTFWRWAH 224


>ref|XP_004149111.1| PREDICTED: membrin-11-like [Cucumis sativus]
          Length = 228

 Score =  309 bits (792), Expect = 1e-81
 Identities = 163/229 (71%), Positives = 184/229 (80%)
 Frame = -2

Query: 1103 MTMMEXXXXGTLSEIYQSSKRLLIRTRDGXXXXXXXXXXXXXSNGGMDSPELSFSIKRDI 924
            M+ +E    GTLSEIYQS+KRLL+RTRDG                GMDSPELSFSIK+DI
Sbjct: 1    MSALEGGGGGTLSEIYQSAKRLLLRTRDGLEKLERLEYSAA---SGMDSPELSFSIKKDI 57

Query: 923  TQIQSLCVEMDRLWRSIGSKPQRDLWKRKVEQVVEEVDSLRESLDKHTQRNQKRAMEAKE 744
            TQIQSLCVEMDRLWRSI +K QRDLWKRKVEQV EE DS+++SLDK+  RNQKR  EAKE
Sbjct: 58   TQIQSLCVEMDRLWRSIAAKSQRDLWKRKVEQVAEEADSMKQSLDKYFLRNQKRMTEAKE 117

Query: 743  RAELFQRANGDSSHVLRIFDEEAQAMQSARNSSLMLEDAYSTGVAILSKYAEQRDLLKRA 564
            RAEL  RA+GDS+H+LRIFD+EAQAM S RNSS MLE+A +TG AIL KY+EQRD LKRA
Sbjct: 118  RAELLGRASGDSAHILRIFDDEAQAMNSVRNSSRMLEEASATGEAILFKYSEQRDRLKRA 177

Query: 563  QRKALDVLNTTTLSNSVLKLIERRHRVDKWIAYSGMTVTVVVVYAFWRW 417
            QRKALDVLNT  LSNSVLKLIERRHRVD WI Y+GM +T+VVV+ F RW
Sbjct: 178  QRKALDVLNTVGLSNSVLKLIERRHRVDNWIKYAGMILTIVVVFFFVRW 226


>ref|NP_001050802.1| Os03g0655200 [Oryza sativa Japonica Group] gi|50582751|gb|AAT78821.1|
            putative vesicle transport protein [Oryza sativa Japonica
            Group] gi|108710166|gb|ABF97961.1| Vesicle transport
            v-SNARE protein, expressed [Oryza sativa Japonica Group]
            gi|113549273|dbj|BAF12716.1| Os03g0655200 [Oryza sativa
            Japonica Group] gi|218193422|gb|EEC75849.1| hypothetical
            protein OsI_12850 [Oryza sativa Indica Group]
            gi|222625485|gb|EEE59617.1| hypothetical protein
            OsJ_11948 [Oryza sativa Japonica Group]
          Length = 244

 Score =  294 bits (753), Expect = 3e-77
 Identities = 149/231 (64%), Positives = 180/231 (77%), Gaps = 10/231 (4%)
 Frame = -2

Query: 1073 TLSEIYQSSKRLLIRTRDGXXXXXXXXXXXXXSN----------GGMDSPELSFSIKRDI 924
            TLSE+YQS++RLL+  RDG             S+          GG      +  ++R++
Sbjct: 14   TLSEMYQSARRLLLSARDGVARVERLASAPTSSSYSSAPLVGGGGGAGDSAAAEEVRREV 73

Query: 923  TQIQSLCVEMDRLWRSIGSKPQRDLWKRKVEQVVEEVDSLRESLDKHTQRNQKRAMEAKE 744
             QIQ LC +MDRLWRSI +K QRDLWKRKVEQ+ EEVDSL+E+LD+H+ R +KR +EAKE
Sbjct: 74   AQIQGLCAQMDRLWRSIPAKGQRDLWKRKVEQLSEEVDSLKETLDRHSLRQKKRVLEAKE 133

Query: 743  RAELFQRANGDSSHVLRIFDEEAQAMQSARNSSLMLEDAYSTGVAILSKYAEQRDLLKRA 564
            RAELF+RANG+SSHVLRIFD+EAQAMQSAR+SS ML++AY TGVAIL KYA+QRD LK A
Sbjct: 134  RAELFERANGESSHVLRIFDDEAQAMQSARSSSRMLDEAYETGVAILHKYADQRDRLKSA 193

Query: 563  QRKALDVLNTTTLSNSVLKLIERRHRVDKWIAYSGMTVTVVVVYAFWRWTH 411
            QRKALD+LNT  LSNSVLKLIERRHRVDKWIAY+GM +TVVV++ FWRWTH
Sbjct: 194  QRKALDILNTVGLSNSVLKLIERRHRVDKWIAYAGMMITVVVMFVFWRWTH 244


>ref|XP_002464137.1| hypothetical protein SORBIDRAFT_01g013020 [Sorghum bicolor]
            gi|241917991|gb|EER91135.1| hypothetical protein
            SORBIDRAFT_01g013020 [Sorghum bicolor]
          Length = 238

 Score =  293 bits (750), Expect = 7e-77
 Identities = 152/230 (66%), Positives = 179/230 (77%), Gaps = 9/230 (3%)
 Frame = -2

Query: 1073 TLSEIYQSSKRLLIRTRDGXXXXXXXXXXXXXSN---------GGMDSPELSFSIKRDIT 921
            TLSE+YQS++RLL+  RDG             S+         G    P ++  ++R++ 
Sbjct: 9    TLSEMYQSARRLLLSARDGVARVERLASAPTSSSYSSAPLVGGGAAGDPAVAEEVRREVA 68

Query: 920  QIQSLCVEMDRLWRSIGSKPQRDLWKRKVEQVVEEVDSLRESLDKHTQRNQKRAMEAKER 741
            QIQ LC +MDRLWRSI +K QRDLWKRKVEQ+ EEVDSL+E+LDKH+ R +KR +EAKER
Sbjct: 69   QIQGLCAQMDRLWRSIPAKGQRDLWKRKVEQLSEEVDSLKETLDKHSLRQKKRILEAKER 128

Query: 740  AELFQRANGDSSHVLRIFDEEAQAMQSARNSSLMLEDAYSTGVAILSKYAEQRDLLKRAQ 561
            AELF+RANG+SSHVLRIFD+EAQA QSARNSS MLE+AY TGVAIL KYA+QRD LK AQ
Sbjct: 129  AELFERANGESSHVLRIFDDEAQAKQSARNSSRMLEEAYETGVAILHKYADQRDRLKSAQ 188

Query: 560  RKALDVLNTTTLSNSVLKLIERRHRVDKWIAYSGMTVTVVVVYAFWRWTH 411
            RKALDVLNT  LSNSVLKLIERRHRVDKWIAY+GM +TVVV+ AFWR TH
Sbjct: 189  RKALDVLNTVGLSNSVLKLIERRHRVDKWIAYAGMIITVVVMIAFWRLTH 238


>ref|NP_001150251.1| LOC100283881 [Zea mays] gi|195637818|gb|ACG38377.1| membrin 11 [Zea
            mays] gi|238013698|gb|ACR37884.1| unknown [Zea mays]
            gi|414872085|tpg|DAA50642.1| TPA: membrin 11 [Zea mays]
          Length = 237

 Score =  290 bits (742), Expect = 6e-76
 Identities = 149/229 (65%), Positives = 178/229 (77%), Gaps = 8/229 (3%)
 Frame = -2

Query: 1073 TLSEIYQSSKRLLIRTRDGXXXXXXXXXXXXXSN--------GGMDSPELSFSIKRDITQ 918
            TLSE+YQS++RLL+  RDG             S+        G    P ++  ++R++ Q
Sbjct: 9    TLSEMYQSARRLLLSARDGVGRVERLASAPTSSSYSSAPLVGGASGDPAVAEEVRREVAQ 68

Query: 917  IQSLCVEMDRLWRSIGSKPQRDLWKRKVEQVVEEVDSLRESLDKHTQRNQKRAMEAKERA 738
            IQ LC +MDRLWRSI +K QRDLWKRKVEQ+ EEVDSL+E+LD+H+ R +KR +EAKERA
Sbjct: 69   IQGLCAQMDRLWRSIPAKGQRDLWKRKVEQLSEEVDSLKETLDRHSLRQKKRILEAKERA 128

Query: 737  ELFQRANGDSSHVLRIFDEEAQAMQSARNSSLMLEDAYSTGVAILSKYAEQRDLLKRAQR 558
            ELF+RANG+SSHVLRIFD+EAQA QSARNSS MLE+AY TGV IL KYA+QRD LK AQR
Sbjct: 129  ELFERANGESSHVLRIFDDEAQAKQSARNSSRMLEEAYETGVGILHKYADQRDRLKSAQR 188

Query: 557  KALDVLNTTTLSNSVLKLIERRHRVDKWIAYSGMTVTVVVVYAFWRWTH 411
            KALDVLNT  LSNSVLKLIERRHRVD+WIAY+GM +TVVV+ AFWR TH
Sbjct: 189  KALDVLNTVGLSNSVLKLIERRHRVDRWIAYAGMVITVVVMIAFWRLTH 237


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