BLASTX nr result

ID: Cimicifuga21_contig00014464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014464
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC76567.1| hypothetical protein OsI_14395 [Oryza sativa Indi...   209   4e-52
gb|AAS01974.1| putative chloroplastic RNA-binding protein, with ...   209   4e-52
ref|XP_002517623.1| conserved hypothetical protein [Ricinus comm...   207   8e-52
ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containi...   207   1e-51
ref|XP_003546039.1| PREDICTED: uncharacterized protein LOC100781...   206   2e-51

>gb|EEC76567.1| hypothetical protein OsI_14395 [Oryza sativa Indica Group]
           gi|222626199|gb|EEE60331.1| hypothetical protein
           OsJ_13429 [Oryza sativa Japonica Group]
          Length = 147

 Score =  209 bits (531), Expect = 4e-52
 Identities = 97/109 (88%), Positives = 106/109 (97%)
 Frame = -2

Query: 579 EERLHWRTFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVCIYVVGKDDYDELALS 400
           EERLHWR+FLVKLGADNLKGAKNEEL VASHKSV IVYT++GDVC+Y+VGKD+YDELAL+
Sbjct: 25  EERLHWRSFLVKLGADNLKGAKNEELLVASHKSVSIVYTMIGDVCLYIVGKDEYDELALA 84

Query: 399 EVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGILENTDKD 253
           EVIF ITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKG+LENT+KD
Sbjct: 85  EVIFAITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGLLENTEKD 133


>gb|AAS01974.1| putative chloroplastic RNA-binding protein, with alternative splicing
            isoforms [Oryza sativa Japonica Group]
            gi|108712189|gb|ABF99984.1| pentatricopeptide, putative,
            expressed [Oryza sativa Japonica Group]
          Length = 884

 Score =  209 bits (531), Expect = 4e-52
 Identities = 97/109 (88%), Positives = 106/109 (97%)
 Frame = -2

Query: 579  EERLHWRTFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVCIYVVGKDDYDELALS 400
            EERLHWR+FLVKLGADNLKGAKNEEL VASHKSV IVYT++GDVC+Y+VGKD+YDELAL+
Sbjct: 762  EERLHWRSFLVKLGADNLKGAKNEELLVASHKSVSIVYTMIGDVCLYIVGKDEYDELALA 821

Query: 399  EVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGILENTDKD 253
            EVIF ITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKG+LENT+KD
Sbjct: 822  EVIFAITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGLLENTEKD 870


>ref|XP_002517623.1| conserved hypothetical protein [Ricinus communis]
           gi|223543255|gb|EEF44787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score =  207 bits (528), Expect = 8e-52
 Identities = 98/109 (89%), Positives = 105/109 (96%)
 Frame = -2

Query: 579 EERLHWRTFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVCIYVVGKDDYDELALS 400
           EERLHWR+FLVKLGADNLKG KNEEL VASHKSVYIVYTVLGDV I+VVGKD+YDELAL+
Sbjct: 25  EERLHWRSFLVKLGADNLKGVKNEELLVASHKSVYIVYTVLGDVSIFVVGKDEYDELALA 84

Query: 399 EVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGILENTDKD 253
           EVIF ITSAVKDVCGKPPTERLFLDKYG+ICLCLDEIVWKG+LENTD+D
Sbjct: 85  EVIFAITSAVKDVCGKPPTERLFLDKYGKICLCLDEIVWKGLLENTDRD 133


>ref|XP_003559110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46580,
            chloroplastic-like [Brachypodium distachyon]
          Length = 875

 Score =  207 bits (526), Expect = 1e-51
 Identities = 95/109 (87%), Positives = 106/109 (97%)
 Frame = -2

Query: 579  EERLHWRTFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVCIYVVGKDDYDELALS 400
            EERLHWR+FLVKLG++NLKGAKNEEL VASHKSV IVYT++GDVC+Y+VGKD+YDELALS
Sbjct: 753  EERLHWRSFLVKLGSENLKGAKNEELLVASHKSVSIVYTMIGDVCLYIVGKDEYDELALS 812

Query: 399  EVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGILENTDKD 253
            EVIF +TSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKG+LENT+KD
Sbjct: 813  EVIFAVTSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGLLENTEKD 861


>ref|XP_003546039.1| PREDICTED: uncharacterized protein LOC100781055 [Glycine max]
          Length = 147

 Score =  206 bits (525), Expect = 2e-51
 Identities = 99/109 (90%), Positives = 104/109 (95%)
 Frame = -2

Query: 579 EERLHWRTFLVKLGADNLKGAKNEELFVASHKSVYIVYTVLGDVCIYVVGKDDYDELALS 400
           EERLHWR+FLVKLGADNLKG KNEEL VA HKSVYIVYTVLGDV IYVVGK++YDELALS
Sbjct: 25  EERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYIVYTVLGDVSIYVVGKEEYDELALS 84

Query: 399 EVIFVITSAVKDVCGKPPTERLFLDKYGRICLCLDEIVWKGILENTDKD 253
           EVIFVITSAVKDVCGKPP+ERLFLDKYGRICLCLDEIVWKG LENT+KD
Sbjct: 85  EVIFVITSAVKDVCGKPPSERLFLDKYGRICLCLDEIVWKGYLENTEKD 133


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