BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014445
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598048.1| Splicing factor U2af large subunit B [Medica...   171   2e-42
ref|XP_003598047.1| Splicing factor U2af large subunit B [Medica...   171   2e-42
ref|XP_002525113.1| splicing factor u2af large subunit, putative...   171   6e-42
ref|XP_003598049.1| Splicing factor U2af large subunit B [Medica...   171   1e-41
ref|XP_004160219.1| PREDICTED: splicing factor U2af large subuni...   170   1e-41

>ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487096|gb|AES68299.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 629

 Score =  171 bits (432), Expect(2) = 2e-42
 Identities = 84/101 (83%), Positives = 94/101 (93%)
 Frame = -1

Query: 305 QTFSTFPVIPVVAMSQQATQHARRVYVGGLSPTATEESVASFFSRVMSAIGGNTAGPGNA 126
           Q FS  PV+PV AM+QQAT+HARRVYVGGLSPTA E+SVA+FFS+VM+ IGGNTAGPG+A
Sbjct: 268 QPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDA 327

Query: 125 VVTVYINHEKKFAFVEMRSVEEASNAMALDGIIYEGAPVKV 3
           VV VYINH+KKFAFVEMRSVEEASNAMALDGII+EGAPVKV
Sbjct: 328 VVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 368



 Score = 26.9 bits (58), Expect(2) = 2e-42
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = -3

Query: 363 TGTRPGIPGMYPIM---PSNCCTDFLNLP 286
           TG  P IPGM+P M   P+N    F  LP
Sbjct: 246 TGASPAIPGMFPNMFPLPTNQVQPFSALP 274


>ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487095|gb|AES68298.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 626

 Score =  171 bits (432), Expect(2) = 2e-42
 Identities = 84/101 (83%), Positives = 94/101 (93%)
 Frame = -1

Query: 305 QTFSTFPVIPVVAMSQQATQHARRVYVGGLSPTATEESVASFFSRVMSAIGGNTAGPGNA 126
           Q FS  PV+PV AM+QQAT+HARRVYVGGLSPTA E+SVA+FFS+VM+ IGGNTAGPG+A
Sbjct: 268 QPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDA 327

Query: 125 VVTVYINHEKKFAFVEMRSVEEASNAMALDGIIYEGAPVKV 3
           VV VYINH+KKFAFVEMRSVEEASNAMALDGII+EGAPVKV
Sbjct: 328 VVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 368



 Score = 26.9 bits (58), Expect(2) = 2e-42
 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = -3

Query: 363 TGTRPGIPGMYPIM---PSNCCTDFLNLP 286
           TG  P IPGM+P M   P+N    F  LP
Sbjct: 246 TGASPAIPGMFPNMFPLPTNQVQPFSALP 274


>ref|XP_002525113.1| splicing factor u2af large subunit, putative [Ricinus communis]
           gi|223535572|gb|EEF37240.1| splicing factor u2af large
           subunit, putative [Ricinus communis]
          Length = 549

 Score =  171 bits (433), Expect(2) = 6e-42
 Identities = 85/101 (84%), Positives = 93/101 (92%)
 Frame = -1

Query: 305 QTFSTFPVIPVVAMSQQATQHARRVYVGGLSPTATEESVASFFSRVMSAIGGNTAGPGNA 126
           Q F T PV+PV AM+QQAT+HARRVYVGGL PTA E+SVA+FFS VM+AIGGNTAGPG+A
Sbjct: 234 QQFGTLPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMAAIGGNTAGPGDA 293

Query: 125 VVTVYINHEKKFAFVEMRSVEEASNAMALDGIIYEGAPVKV 3
           VV VYINHEKKFAFVEMRSVEEASNAMALDGII+EGAPVKV
Sbjct: 294 VVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 334



 Score = 24.6 bits (52), Expect(2) = 6e-42
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -3

Query: 360 GTRPGIPGMYPIM-PSNCCTDFLNLP 286
           GT P IPGM+P M P      F  LP
Sbjct: 215 GTAPAIPGMFPNMFPLGTGQQFGTLP 240


>ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
           gi|355487097|gb|AES68300.1| Splicing factor U2af large
           subunit B [Medicago truncatula]
          Length = 627

 Score =  171 bits (432), Expect(2) = 1e-41
 Identities = 84/101 (83%), Positives = 94/101 (93%)
 Frame = -1

Query: 305 QTFSTFPVIPVVAMSQQATQHARRVYVGGLSPTATEESVASFFSRVMSAIGGNTAGPGNA 126
           Q FS  PV+PV AM+QQAT+HARRVYVGGLSPTA E+SVA+FFS+VM+ IGGNTAGPG+A
Sbjct: 266 QPFSALPVLPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMATIGGNTAGPGDA 325

Query: 125 VVTVYINHEKKFAFVEMRSVEEASNAMALDGIIYEGAPVKV 3
           VV VYINH+KKFAFVEMRSVEEASNAMALDGII+EGAPVKV
Sbjct: 326 VVNVYINHDKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 366



 Score = 24.3 bits (51), Expect(2) = 1e-41
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 363 TGTRPGIPGMYPIM 322
           TG  P IPGM+P M
Sbjct: 246 TGASPAIPGMFPNM 259


>ref|XP_004160219.1| PREDICTED: splicing factor U2af large subunit B-like [Cucumis
           sativus]
          Length = 587

 Score =  170 bits (430), Expect(2) = 1e-41
 Identities = 84/105 (80%), Positives = 94/105 (89%)
 Frame = -1

Query: 317 VTAAQTFSTFPVIPVVAMSQQATQHARRVYVGGLSPTATEESVASFFSRVMSAIGGNTAG 138
           +   Q F   PV+PV AM+QQAT+HARRVYVGGL PTA E+SVA+FFS+VM+AIGGNTAG
Sbjct: 228 LATGQPFGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSQVMAAIGGNTAG 287

Query: 137 PGNAVVTVYINHEKKFAFVEMRSVEEASNAMALDGIIYEGAPVKV 3
           PG+AVV VYINHEKKFAFVEMRSVEEASNAMALDGII+EGAPVKV
Sbjct: 288 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKV 332



 Score = 25.0 bits (53), Expect(2) = 1e-41
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 360 GTRPGIPGMYPIM 322
           GT P IPGM+P M
Sbjct: 213 GTTPAIPGMFPTM 225