BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014435
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional ...   335   1e-89
emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]   319   7e-85
ref|XP_002518499.1| nuclear acid binding protein, putative [Rici...   293   4e-77
gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indi...   289   8e-76
gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sa...   287   2e-75

>ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Vitis vinifera]
          Length = 417

 Score =  335 bits (858), Expect = 1e-89
 Identities = 172/241 (71%), Positives = 184/241 (76%), Gaps = 1/241 (0%)
 Frame = +3

Query: 3   FVGDLASDVTDYMLQEAFKGHYTSIRGAKVVTDRTTGRSKGYGFVRFGDENEQLRAMTEM 182
           FVGDLASDVTDY+LQE F+GHY S++GAKVVTDRTTGRSKGYGFVRFGDE EQLRAM EM
Sbjct: 186 FVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEM 245

Query: 183 NGMFCSSRPMRIGPAATKKNVGGQQYPKASCPNTQGTQSESDPNNTTIFVGGLDSNVTDD 362
           NGMFCS+RPMRIGPAATKK VGGQQ+ KAS  NTQG Q ESDPNNTTIFVGGLDSNVTDD
Sbjct: 246 NGMFCSTRPMRIGPAATKKPVGGQQFQKASFQNTQGNQGESDPNNTTIFVGGLDSNVTDD 305

Query: 363 NLRQLFSQYGELTHVKIPVGKRCGFVQFASRACAAEAXXXXXXXXXXXXSIRLSWGRSPS 542
            LRQ+FSQYGEL HVKIPVGKRCGFVQFA+RACA +A            SIRLSWGRSPS
Sbjct: 306 YLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPS 365

Query: 543 SKQDASVGMVQSQPDPXXXXXXXXXXXXXXXXXXXAPPAQDPNMYAYGPYPGYGNH-QPQ 719
           +K        Q+QPD                    APP QDPNMY YG YPGYGN+ QPQ
Sbjct: 366 NK--------QAQPDQAQWNGGYYGYAQGYEAYGYAPPPQDPNMY-YGAYPGYGNYQQPQ 416

Query: 720 Q 722
           Q
Sbjct: 417 Q 417


>emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
          Length = 410

 Score =  319 bits (817), Expect = 7e-85
 Identities = 168/241 (69%), Positives = 179/241 (74%), Gaps = 1/241 (0%)
 Frame = +3

Query: 3   FVGDLASDVTDYMLQEAFKGHYTSIRGAKVVTDRTTGRSKGYGFVRFGDENEQLRAMTEM 182
           FVGDLASDVTDY+LQE F+GHY S++GAKVVTDRTTGRSKGYGFVRFGDE EQLRAM EM
Sbjct: 171 FVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEM 230

Query: 183 NGMFCSSRPMRIGPAATKKNVGGQQYPKASCPNTQGTQSESDPNNTTIFVGGLDSNVTDD 362
           NGMFCS+RPMRIGPAATKK VG      AS  NTQG Q ESDPNNTTIFVGGLDSNVTDD
Sbjct: 231 NGMFCSTRPMRIGPAATKKPVG------ASFQNTQGXQGESDPNNTTIFVGGLDSNVTDD 284

Query: 363 NLRQLFSQYGELTHVKIPVGKRCGFVQFASRACAAEAXXXXXXXXXXXXSIRLSWGRSPS 542
            LRQ+FSQYGEL HVKIPVGKRCGFVQFA+RACA +A            SIRLSWGRSPS
Sbjct: 285 YLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPS 344

Query: 543 SKQDASVGMVQSQPDPXXXXXXXXXXXXXXXXXXXAPPAQDPNMYAYGPYPGYGNH-QPQ 719
           +K        Q+QPD                    APP QDPNMY YG YPGYGN+ QPQ
Sbjct: 345 NK--------QAQPDQAQWNGGYYGYAQGYEAYGYAPPPQDPNMY-YGAYPGYGNYQQPQ 395

Query: 720 Q 722
           Q
Sbjct: 396 Q 396


>ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223542344|gb|EEF43886.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 430

 Score =  293 bits (750), Expect = 4e-77
 Identities = 153/242 (63%), Positives = 173/242 (71%), Gaps = 2/242 (0%)
 Frame = +3

Query: 3   FVGDLASDVTDYMLQEAFKGHYTSIRGAKVVTDRTTGRSKGYGFVRFGDENEQLRAMTEM 182
           FVGDLA+DVTDY+LQ+ F+ HY S++GAKVV DR TGR+KGYGFVRFGDE+EQ+RAMT+M
Sbjct: 184 FVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDM 243

Query: 183 NGMFCSSRPMRIGPAATKKNVGGQQYPKASCPN--TQGTQSESDPNNTTIFVGGLDSNVT 356
           NG FCS+RPMRIG A  K  V GQQYPKAS  N  TQG ++E+DPNNTTIFVG LDSNVT
Sbjct: 244 NGAFCSTRPMRIGLATNKNAVTGQQYPKASYQNSQTQG-ENENDPNNTTIFVGNLDSNVT 302

Query: 357 DDNLRQLFSQYGELTHVKIPVGKRCGFVQFASRACAAEAXXXXXXXXXXXXSIRLSWGRS 536
           DDNLR+LF +YG+L HVKIP GKRCGFVQFA R+CA EA            SIRLSWGRS
Sbjct: 303 DDNLRELFGRYGQLLHVKIPAGKRCGFVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRS 362

Query: 537 PSSKQDASVGMVQSQPDPXXXXXXXXXXXXXXXXXXXAPPAQDPNMYAYGPYPGYGNHQP 716
           PS+K        Q QPD                    AP  QDPNMY YG YPGYGN+Q 
Sbjct: 363 PSNK--------QPQPDANQWNAGYYGYAQGYENYGYAPAPQDPNMY-YGNYPGYGNYQQ 413

Query: 717 QQ 722
           QQ
Sbjct: 414 QQ 415


>gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
          Length = 406

 Score =  289 bits (739), Expect = 8e-76
 Identities = 148/243 (60%), Positives = 170/243 (69%), Gaps = 3/243 (1%)
 Frame = +3

Query: 3   FVGDLASDVTDYMLQEAFKGHYTSIRGAKVVTDRTTGRSKGYGFVRFGDENEQLRAMTEM 182
           FVGDLASDVTD +LQ+ FK HY S++GAKVV DR+TGRSKGYGFV+FGD +EQ RAMTEM
Sbjct: 163 FVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEM 222

Query: 183 NGMFCSSRPMRIGPAATKKNVGGQQYPKASCPNTQGTQSESDPNNTTIFVGGLDSNVTDD 362
           NG +CSSRPMRIGPA+ KKN+GGQQ P A+  NTQGT S+SDPNNTT+FVGGLD +VTD+
Sbjct: 223 NGQYCSSRPMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDE 282

Query: 363 NLRQLFSQYGELTHVKIPVGKRCGFVQFASRACAAEAXXXXXXXXXXXXSIRLSWGRSPS 542
            L+Q FS YGEL +VKIPVGKRCGFVQ+++RA A EA            SIRLSWGRSP 
Sbjct: 283 VLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPG 342

Query: 543 SKQDASVGMVQSQPDPXXXXXXXXXXXXXXXXXXXAPPAQDPNMYAYGPYPGYGNHQ--- 713
           +KQ         Q                      A P QDP MYAY  YPGYGN+Q   
Sbjct: 343 NKQ-------PQQDQNQWNAGYYGYPPQGYDPYGYARPPQDPAMYAYAAYPGYGNYQQPA 395

Query: 714 PQQ 722
           PQQ
Sbjct: 396 PQQ 398


>gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
           gi|108709397|gb|ABF97192.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|215678704|dbj|BAG95141.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 402

 Score =  287 bits (735), Expect = 2e-75
 Identities = 147/243 (60%), Positives = 169/243 (69%), Gaps = 3/243 (1%)
 Frame = +3

Query: 3   FVGDLASDVTDYMLQEAFKGHYTSIRGAKVVTDRTTGRSKGYGFVRFGDENEQLRAMTEM 182
           FVGDLASDVTD +LQ+ FK HY S++GAKVV DR+TGRSKGYGFV+FGD +EQ RAMTEM
Sbjct: 163 FVGDLASDVTDLILQDTFKAHYQSVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEM 222

Query: 183 NGMFCSSRPMRIGPAATKKNVGGQQYPKASCPNTQGTQSESDPNNTTIFVGGLDSNVTDD 362
           NG +CSSRPMRIGPA+ KKN+GGQQ P A+  NTQGT S+SDPNNTT+FVGGLD +VTD+
Sbjct: 223 NGQYCSSRPMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDPNNTTVFVGGLDPSVTDE 282

Query: 363 NLRQLFSQYGELTHVKIPVGKRCGFVQFASRACAAEAXXXXXXXXXXXXSIRLSWGRSPS 542
            L+Q FS YGEL +VKIPVGKRCGFVQ+++RA A EA            SIRLSWGRSP 
Sbjct: 283 VLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSPG 342

Query: 543 SKQDASVGMVQSQPDPXXXXXXXXXXXXXXXXXXXAPPAQDPNMYAYGPYPGYGNHQ--- 713
           +KQ         Q                        P QDP MYAY  YPGYGN+Q   
Sbjct: 343 NKQ-------PQQDQNQWNAGYYGYPPQGYDPYGYVRPPQDPAMYAYAAYPGYGNYQQPA 395

Query: 714 PQQ 722
           PQQ
Sbjct: 396 PQQ 398