BLASTX nr result

ID: Cimicifuga21_contig00014424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014424
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...   228   3e-58
emb|CBI33563.3| unnamed protein product [Vitis vinifera]              228   3e-58
dbj|BAA85457.1| S-locus protein 8 [Brassica rapa]                     221   5e-56
ref|XP_002302984.1| methionyl-trna formyltransferase [Populus tr...   221   6e-56
emb|CAB89181.1| Fmt protein [Brassica napus var. napus]               218   5e-55

>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score =  228 bits (582), Expect = 3e-58
 Identities = 117/160 (73%), Positives = 129/160 (80%)
 Frame = -3

Query: 480 APELLTLLFDQGSELLLRELPSIFDGSARLKANAQDESKATLAPKLTTEESWLSFDQEAI 301
           A +LL LLF QGS+LL+ ELPSIFDGSA LKA  QD+SKATLAPK+T EESWLSFDQEA 
Sbjct: 203 ATDLLALLFSQGSKLLIHELPSIFDGSANLKAQPQDDSKATLAPKITPEESWLSFDQEAS 262

Query: 300 VLHNKVRAFAGWPGTRTKVRVLDTNNSEKSTLELKIITTRARSISNSHGDEKDDVTFVGD 121
           VLHNKVRAFAGWPGTR KV V+D  N E + L+LKIITTR    SN   +E DDV F+ D
Sbjct: 263 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 322

Query: 120 ALVFPCGGGSALEVLEVQLPGKKVVSATTFRNGLRGQKLK 1
           ALVFPC G SALEVLEVQLPGKKVV+A  F NGLRGQ+LK
Sbjct: 323 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQRLK 362


>emb|CBI33563.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  228 bits (582), Expect = 3e-58
 Identities = 117/160 (73%), Positives = 129/160 (80%)
 Frame = -3

Query: 480 APELLTLLFDQGSELLLRELPSIFDGSARLKANAQDESKATLAPKLTTEESWLSFDQEAI 301
           A +LL LLF QGS+LL+ ELPSIFDGSA LKA  QD+SKATLAPK+T EESWLSFDQEA 
Sbjct: 230 ATDLLALLFSQGSKLLIHELPSIFDGSANLKAQPQDDSKATLAPKITPEESWLSFDQEAS 289

Query: 300 VLHNKVRAFAGWPGTRTKVRVLDTNNSEKSTLELKIITTRARSISNSHGDEKDDVTFVGD 121
           VLHNKVRAFAGWPGTR KV V+D  N E + L+LKIITTR    SN   +E DDV F+ D
Sbjct: 290 VLHNKVRAFAGWPGTRAKVVVIDDKNGEHNVLDLKIITTRVCGQSNIQVNEADDVRFIKD 349

Query: 120 ALVFPCGGGSALEVLEVQLPGKKVVSATTFRNGLRGQKLK 1
           ALVFPC G SALEVLEVQLPGKKVV+A  F NGLRGQ+LK
Sbjct: 350 ALVFPCSGSSALEVLEVQLPGKKVVNAAAFWNGLRGQRLK 389


>dbj|BAA85457.1| S-locus protein 8 [Brassica rapa]
          Length = 197

 Score =  221 bits (563), Expect = 5e-56
 Identities = 112/160 (70%), Positives = 130/160 (81%)
 Frame = -3

Query: 480 APELLTLLFDQGSELLLRELPSIFDGSARLKANAQDESKATLAPKLTTEESWLSFDQEAI 301
           APELL+LLF +GS+LL+RELPSIFDGSA+ KA  QD+SKATLAPK+  +E+WLSFDQEA 
Sbjct: 36  APELLSLLFSEGSKLLIRELPSIFDGSAKSKAVPQDDSKATLAPKIAPDEAWLSFDQEAF 95

Query: 300 VLHNKVRAFAGWPGTRTKVRVLDTNNSEKSTLELKIITTRARSISNSHGDEKDDVTFVGD 121
           VLHNKVRAFAGWPGTR KV VLD  + +++ LELKIITTR    +     E+D VTF   
Sbjct: 96  VLHNKVRAFAGWPGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKG 155

Query: 120 ALVFPCGGGSALEVLEVQLPGKKVVSATTFRNGLRGQKLK 1
           +LVFPCGGG+ALEVLEVQLPGKK + AT F NGLRGQKLK
Sbjct: 156 SLVFPCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQKLK 195


>ref|XP_002302984.1| methionyl-trna formyltransferase [Populus trichocarpa]
           gi|222844710|gb|EEE82257.1| methionyl-trna
           formyltransferase [Populus trichocarpa]
          Length = 356

 Score =  221 bits (562), Expect = 6e-56
 Identities = 111/160 (69%), Positives = 128/160 (80%)
 Frame = -3

Query: 480 APELLTLLFDQGSELLLRELPSIFDGSARLKANAQDESKATLAPKLTTEESWLSFDQEAI 301
           AP+LL LLF +GS+LL+ ELPSI  GSARLKA  QD+SKATLAPK++ EESWLSFDQEA 
Sbjct: 195 APDLLALLFLEGSKLLIHELPSILHGSARLKAQPQDDSKATLAPKISVEESWLSFDQEAS 254

Query: 300 VLHNKVRAFAGWPGTRTKVRVLDTNNSEKSTLELKIITTRARSISNSHGDEKDDVTFVGD 121
           VLHNKVRAFAGWPGTR KV ++D  N  ++ +ELKIITTR    S   GDE DD+T+V D
Sbjct: 255 VLHNKVRAFAGWPGTRAKVAIVDDENDRRNIVELKIITTRVCDRSIVQGDEADDITYVKD 314

Query: 120 ALVFPCGGGSALEVLEVQLPGKKVVSATTFRNGLRGQKLK 1
           +LVFPCG  +ALEVLE+QLPGKKV  A  F NGLRGQKLK
Sbjct: 315 SLVFPCGRSTALEVLELQLPGKKVFRAAAFWNGLRGQKLK 354


>emb|CAB89181.1| Fmt protein [Brassica napus var. napus]
          Length = 354

 Score =  218 bits (554), Expect = 5e-55
 Identities = 110/160 (68%), Positives = 129/160 (80%)
 Frame = -3

Query: 480 APELLTLLFDQGSELLLRELPSIFDGSARLKANAQDESKATLAPKLTTEESWLSFDQEAI 301
           APELL+LLF +GS+LL+RELPSIFDGSA+ KA  QD+SKATLAPK+  +E+WLSFDQEA 
Sbjct: 193 APELLSLLFSEGSKLLIRELPSIFDGSAKSKAVPQDDSKATLAPKIAPDEAWLSFDQEAF 252

Query: 300 VLHNKVRAFAGWPGTRTKVRVLDTNNSEKSTLELKIITTRARSISNSHGDEKDDVTFVGD 121
           +LHNKVRAFAGWPGTR KV VLD  + +++ LELKIITTR    +     E+D VTF   
Sbjct: 253 ILHNKVRAFAGWPGTRAKVLVLDDKSGQQNELELKIITTRICQSTEVLNGEQDYVTFKKG 312

Query: 120 ALVFPCGGGSALEVLEVQLPGKKVVSATTFRNGLRGQKLK 1
           +LVF CGGG+ALEVLEVQLPGKK + AT F NGLRGQKLK
Sbjct: 313 SLVFSCGGGTALEVLEVQLPGKKAIDATAFWNGLRGQKLK 352


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