BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014418
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003577312.1| PREDICTED: splicing factor U2af large subuni...   135   3e-30
ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group] g...   133   2e-29
gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa ...   133   2e-29
gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indi...   132   2e-29
gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| sp...   132   4e-29

>ref|XP_003577312.1| PREDICTED: splicing factor U2af large subunit B-like [Brachypodium
           distachyon]
          Length = 576

 Score =  135 bits (340), Expect = 3e-30
 Identities = 70/97 (72%), Positives = 78/97 (80%)
 Frame = +3

Query: 6   VTDIACAALNGIKMGDKTLTVRRANQGATQPKPEQETXXXXXXXXXXXXXXXIQGGPATV 185
           VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQET               +Q G A +
Sbjct: 414 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQETILMQAHQQVQMQRLVLQVGGA-L 472

Query: 186 PTRVVCLTQVVSADELRNDEEYQDIVEDMREEGTKYG 296
           PT+VVCLTQVVSADELR+DEEY+DI+EDMREEG KYG
Sbjct: 473 PTKVVCLTQVVSADELRDDEEYEDILEDMREEGRKYG 509


>ref|NP_001068330.1| Os11g0636900 [Oryza sativa Japonica Group]
           gi|122248736|sp|Q2R0Q1.2|U2A2A_ORYSJ RecName:
           Full=Splicing factor U2af large subunit A; AltName:
           Full=U2 auxiliary factor 65 kDa subunit A; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           large subunit A; Short=U2 snRNP auxiliary factor large
           subunit A gi|108864607|gb|ABA94914.2| U2 snRNP
           auxilliary factor, large subunit, splicing factor family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113645552|dbj|BAF28693.1| Os11g0636900 [Oryza sativa
           Japonica Group] gi|222616290|gb|EEE52422.1| hypothetical
           protein OsJ_34542 [Oryza sativa Japonica Group]
          Length = 574

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/97 (68%), Positives = 75/97 (77%)
 Frame = +3

Query: 6   VTDIACAALNGIKMGDKTLTVRRANQGATQPKPEQETXXXXXXXXXXXXXXXIQGGPATV 185
           VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQE+                Q G   +
Sbjct: 411 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGAL 470

Query: 186 PTRVVCLTQVVSADELRNDEEYQDIVEDMREEGTKYG 296
           PT+VVCLTQVVS DELR+DEEY+DIV+DMREEG +YG
Sbjct: 471 PTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYG 507


>gb|AAO72620.1| putative U2 snRNP auxiliary factor [Oryza sativa Japonica Group]
          Length = 331

 Score =  133 bits (334), Expect = 2e-29
 Identities = 66/97 (68%), Positives = 75/97 (77%)
 Frame = +3

Query: 6   VTDIACAALNGIKMGDKTLTVRRANQGATQPKPEQETXXXXXXXXXXXXXXXIQGGPATV 185
           VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQE+                Q G   +
Sbjct: 206 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGAL 265

Query: 186 PTRVVCLTQVVSADELRNDEEYQDIVEDMREEGTKYG 296
           PT+VVCLTQVVS DELR+DEEY+DIV+DMREEG +YG
Sbjct: 266 PTKVVCLTQVVSPDELRDDEEYEDIVQDMREEGCRYG 302


>gb|EEC68511.1| hypothetical protein OsI_36782 [Oryza sativa Indica Group]
          Length = 574

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/97 (67%), Positives = 75/97 (77%)
 Frame = +3

Query: 6   VTDIACAALNGIKMGDKTLTVRRANQGATQPKPEQETXXXXXXXXXXXXXXXIQGGPATV 185
           VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQE+                Q G   +
Sbjct: 411 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESMLLHVQQQAQMQKLMFQVGGGAL 470

Query: 186 PTRVVCLTQVVSADELRNDEEYQDIVEDMREEGTKYG 296
           PT+VVCLTQV+S DELR+DEEY+DIV+DMREEG +YG
Sbjct: 471 PTKVVCLTQVISPDELRDDEEYEDIVQDMREEGCRYG 507


>gb|ACN29168.1| unknown [Zea mays] gi|413920349|gb|AFW60281.1| splicing factor U2AF
           subunit [Zea mays]
          Length = 594

 Score =  132 bits (331), Expect = 4e-29
 Identities = 69/97 (71%), Positives = 76/97 (78%)
 Frame = +3

Query: 6   VTDIACAALNGIKMGDKTLTVRRANQGATQPKPEQETXXXXXXXXXXXXXXXIQGGPATV 185
           VTDIACAALNGIKMGDKTLTVRRANQGA+QP+PEQE+                Q G A +
Sbjct: 433 VTDIACAALNGIKMGDKTLTVRRANQGASQPRPEQESILLQAQQQVQMQKLVYQVGGA-L 491

Query: 186 PTRVVCLTQVVSADELRNDEEYQDIVEDMREEGTKYG 296
           PT+VVCLTQVV+ADELR+DEEY DIVEDMREEG KYG
Sbjct: 492 PTKVVCLTQVVTADELRDDEEYNDIVEDMREEGRKYG 528