BLASTX nr result

ID: Cimicifuga21_contig00014412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014412
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA hom...   411   e-112
emb|CAN77877.1| hypothetical protein VITISV_004501 [Vitis vinifera]   411   e-112
ref|XP_003527397.1| PREDICTED: GTP-binding protein TypA/BipA hom...   410   e-112
ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA hom...   408   e-112
ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA hom...   404   e-110

>ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
           vinifera] gi|302143376|emb|CBI21937.3| unnamed protein
           product [Vitis vinifera]
          Length = 672

 Score =  411 bits (1056), Expect = e-112
 Identities = 219/319 (68%), Positives = 242/319 (75%), Gaps = 8/319 (2%)
 Frame = +2

Query: 44  MVNPLLRSLFCSSTYNRSLTLQSSLLH-------HISGLTRSFXXXXXXXXXXLD-TYLD 199
           M  PLLRSL+ ++  + S +  S+ L        H   L R F             + LD
Sbjct: 1   MAGPLLRSLWSTTRKSLSSSSPSAPLRPFLCPRPHAYTLPRCFSAVAGAAAAAAPGSSLD 60

Query: 200 PNKLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPW 379
           PN+LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA+DSISLERERGITI+SKVT+I W
Sbjct: 61  PNRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSISLERERGITIASKVTAILW 120

Query: 380 NGHELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPIL 559
             +ELNMVDTPGHADF             A+LVVDAGEGPLAQTKFVLAKALKYGLRPIL
Sbjct: 121 KENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPIL 180

Query: 560 LLNKVDRPAVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPD 739
           LLNKVDRPAV+EERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASS+FTK PPD
Sbjct: 181 LLNKVDRPAVTEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSTFTKSPPD 240

Query: 740 NARNMSPLLDAIVNHVTPPTANTEAPFQMLVSMMERDFYLGRVLXXXXXXXXXXXXDRVH 919
           N ++MS LLDAI+ HV PPTA+ +APFQMLVSMME+DFYLGR+L            DRVH
Sbjct: 241 NTKSMSELLDAIIRHVPPPTASLDAPFQMLVSMMEKDFYLGRILTGRVSSGVIRVGDRVH 300

Query: 920 GIHHKDSGVGKTEEGKVTK 976
           G+   DSGV K EEGKV K
Sbjct: 301 GLRSTDSGVEKIEEGKVLK 319


>emb|CAN77877.1| hypothetical protein VITISV_004501 [Vitis vinifera]
          Length = 618

 Score =  411 bits (1056), Expect = e-112
 Identities = 219/319 (68%), Positives = 242/319 (75%), Gaps = 8/319 (2%)
 Frame = +2

Query: 44  MVNPLLRSLFCSSTYNRSLTLQSSLLH-------HISGLTRSFXXXXXXXXXXLD-TYLD 199
           M  PLLRSL+ ++  + S +  S+ L        H   L R F             + LD
Sbjct: 1   MAGPLLRSLWSTTRKSLSSSSPSAPLRPFLCPRPHAYTLPRCFSAVAGAAAAAAPGSSLD 60

Query: 200 PNKLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPW 379
           PN+LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA+DSISLERERGITI+SKVT+I W
Sbjct: 61  PNRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSISLERERGITIASKVTAILW 120

Query: 380 NGHELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPIL 559
             +ELNMVDTPGHADF             A+LVVDAGEGPLAQTKFVLAKALKYGLRPIL
Sbjct: 121 KENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPIL 180

Query: 560 LLNKVDRPAVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPD 739
           LLNKVDRPAV+EERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASS+FTK PPD
Sbjct: 181 LLNKVDRPAVTEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSTFTKSPPD 240

Query: 740 NARNMSPLLDAIVNHVTPPTANTEAPFQMLVSMMERDFYLGRVLXXXXXXXXXXXXDRVH 919
           N ++MS LLDAI+ HV PPTA+ +APFQMLVSMME+DFYLGR+L            DRVH
Sbjct: 241 NTKSMSELLDAIIRHVPPPTASLDAPFQMLVSMMEKDFYLGRILTGRVSSGVIRVGDRVH 300

Query: 920 GIHHKDSGVGKTEEGKVTK 976
           G+   DSGV K EEGKV K
Sbjct: 301 GLRSTDSGVEKIEEGKVLK 319


>ref|XP_003527397.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  410 bits (1053), Expect = e-112
 Identities = 217/317 (68%), Positives = 242/317 (76%), Gaps = 6/317 (1%)
 Frame = +2

Query: 44  MVNPLLRSLFCSSTYNRSLTLQSSL----LHHISGLTRSFXXXXXXXXXXLDTY--LDPN 205
           MV P++RSL+ S+  + S +  S      L H    +R+F            T   LDP+
Sbjct: 1   MVGPIIRSLWSSTRKSFSSSSSSFSPSPPLSHSRFFSRAFAAAPATAPAAATTASSLDPS 60

Query: 206 KLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNG 385
           +LRN+AVIAHVDHGKTTLMDRLLRQCGAD+PHERAMDSISLERERGITISSKVTS+ W  
Sbjct: 61  RLRNLAVIAHVDHGKTTLMDRLLRQCGADLPHERAMDSISLERERGITISSKVTSVSWKE 120

Query: 386 HELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 565
           +ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKYGLRPILLL
Sbjct: 121 NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 180

Query: 566 NKVDRPAVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPDNA 745
           NKVDRPAVSEE CDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS++FTK PP +A
Sbjct: 181 NKVDRPAVSEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPADA 240

Query: 746 RNMSPLLDAIVNHVTPPTANTEAPFQMLVSMMERDFYLGRVLXXXXXXXXXXXXDRVHGI 925
           RNMS LLDA+V HV PP AN +APFQMLVSMME+DFYLGR+L            D+VHG+
Sbjct: 241 RNMSQLLDAVVRHVPPPNANIDAPFQMLVSMMEKDFYLGRILTGRIFSGVVRVGDKVHGL 300

Query: 926 HHKDSGVGKTEEGKVTK 976
            +KDSG  K E+GKV K
Sbjct: 301 RNKDSGAEKIEDGKVVK 317


>ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  408 bits (1049), Expect = e-112
 Identities = 217/317 (68%), Positives = 240/317 (75%), Gaps = 6/317 (1%)
 Frame = +2

Query: 44  MVNPLLRSLFCSSTYNRSLTLQSSL-----LHHISGLTRSFXXXXXXXXXXLD-TYLDPN 205
           M  P+LRSL+ S+  + S +  SS        H    +R+F             + LDP+
Sbjct: 1   MAGPILRSLWSSTRKSFSSSFSSSSSPSAPFSHSRFFSRTFAAAPAAATTATTASSLDPS 60

Query: 206 KLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNG 385
            LRNVAVIAHVDHGKTTLMDRLLRQCGAD+PHERAMDSISLERERGITISSKVTS+ W  
Sbjct: 61  HLRNVAVIAHVDHGKTTLMDRLLRQCGADLPHERAMDSISLERERGITISSKVTSVSWKE 120

Query: 386 HELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 565
           +ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKYGLRPILLL
Sbjct: 121 NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 180

Query: 566 NKVDRPAVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPDNA 745
           NKVDRPAVSEE CDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS++FTK PP +A
Sbjct: 181 NKVDRPAVSEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPADA 240

Query: 746 RNMSPLLDAIVNHVTPPTANTEAPFQMLVSMMERDFYLGRVLXXXXXXXXXXXXDRVHGI 925
           RNMS LLDA+V HV PP A+ +APFQMLVSMME+DFYLGR+L            DRVHG+
Sbjct: 241 RNMSQLLDAVVRHVPPPNASIDAPFQMLVSMMEKDFYLGRILTGRIYSGIVRVGDRVHGL 300

Query: 926 HHKDSGVGKTEEGKVTK 976
            +KDSG  K E+GKV K
Sbjct: 301 RNKDSGAEKIEDGKVVK 317


>ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Cucumis sativus]
          Length = 676

 Score =  404 bits (1037), Expect = e-110
 Identities = 218/325 (67%), Positives = 239/325 (73%), Gaps = 14/325 (4%)
 Frame = +2

Query: 44  MVNPLLRSLFCSSTYNRSLTLQSSLLHHISG------------LTRSFXXXXXXXXXXL- 184
           M  PLLR L+ SS  +RS++  S    H+              L R+F          + 
Sbjct: 1   MAGPLLRRLWSSS--HRSISSSSFSSFHLQSHIISPSSVFPNLLARAFSAATATAAAAVA 58

Query: 185 -DTYLDPNKLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSK 361
             + LDP++LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITI+SK
Sbjct: 59  PSSDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASK 118

Query: 362 VTSIPWNGHELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKY 541
           VTS+ W  +ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKY
Sbjct: 119 VTSVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKY 178

Query: 542 GLRPILLLNKVDRPAVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSF 721
           GLRPILLLNKVDRP+VSEERC EVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS+++
Sbjct: 179 GLRPILLLNKVDRPSVSEERCSEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASNTY 238

Query: 722 TKGPPDNARNMSPLLDAIVNHVTPPTANTEAPFQMLVSMMERDFYLGRVLXXXXXXXXXX 901
           TK PP   RNMS LLDAI+ HV PP A  + PFQMLVSMMERDFYLGR+L          
Sbjct: 239 TKDPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVR 298

Query: 902 XXDRVHGIHHKDSGVGKTEEGKVTK 976
             DRVHG+  KDSGV K EEGKV K
Sbjct: 299 TGDRVHGLRVKDSGVEKIEEGKVVK 323


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