BLASTX nr result

ID: Cimicifuga21_contig00014411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014411
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA hom...   393   e-107
ref|XP_004144599.1| PREDICTED: GTP-binding protein TypA/BipA hom...   393   e-107
ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA hom...   392   e-107
ref|XP_003527397.1| PREDICTED: GTP-binding protein TypA/BipA hom...   392   e-107
ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA hom...   391   e-106

>ref|XP_004165675.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Cucumis sativus]
          Length = 676

 Score =  393 bits (1009), Expect = e-107
 Identities = 214/323 (66%), Positives = 233/323 (72%), Gaps = 10/323 (3%)
 Frame = +1

Query: 19  MANPLLRSLFSAS---------TTYHHRSRTLQ-SSLLQRISGLTRSFXXXXXXXXXXLD 168
           MA PLLR L+S+S         +++H +S  +  SS+   +     S             
Sbjct: 1   MAGPLLRRLWSSSHRSISSSSFSSFHLQSHIISPSSVFPNLLARAFSAATATAAAAVAPS 60

Query: 169 TYLDPSKLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVT 348
           + LDPS+LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITI+SKVT
Sbjct: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120

Query: 349 SIPWNGYELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGL 528
           S+ W   ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKYGL
Sbjct: 121 SVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180

Query: 529 RPILLMNKVDRPSVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTK 708
           RPILL+NKVDRPSVSEERC EVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS+++TK
Sbjct: 181 RPILLLNKVDRPSVSEERCSEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASNTYTK 240

Query: 709 GPPENARNMSPLLDAIINHVTPPTANTEAPFQMLVSMMERDFYLXXXXXXXXXXXXXXXX 888
            PP   RNMS LLDAII HV PP A  + PFQMLVSMMERDFYL                
Sbjct: 241 DPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVRTG 300

Query: 889 XXVHGIHHKDSGVVKTEEGKVTK 957
             VHG+  KDSGV K EEGKV K
Sbjct: 301 DRVHGLRVKDSGVEKIEEGKVVK 323


>ref|XP_004144599.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Cucumis sativus]
          Length = 614

 Score =  393 bits (1009), Expect = e-107
 Identities = 214/323 (66%), Positives = 233/323 (72%), Gaps = 10/323 (3%)
 Frame = +1

Query: 19  MANPLLRSLFSAS---------TTYHHRSRTLQ-SSLLQRISGLTRSFXXXXXXXXXXLD 168
           MA PLLR L+S+S         +++H +S  +  SS+   +     S             
Sbjct: 1   MAGPLLRRLWSSSHRSISSSSFSSFHLQSHIISPSSVFPNLLARAFSAATATAAAAVAPS 60

Query: 169 TYLDPSKLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVT 348
           + LDPS+LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITI+SKVT
Sbjct: 61  SDLDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVT 120

Query: 349 SIPWNGYELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGL 528
           S+ W   ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKYGL
Sbjct: 121 SVSWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGL 180

Query: 529 RPILLMNKVDRPSVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTK 708
           RPILL+NKVDRPSVSEERC EVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS+++TK
Sbjct: 181 RPILLLNKVDRPSVSEERCSEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASNTYTK 240

Query: 709 GPPENARNMSPLLDAIINHVTPPTANTEAPFQMLVSMMERDFYLXXXXXXXXXXXXXXXX 888
            PP   RNMS LLDAII HV PP A  + PFQMLVSMMERDFYL                
Sbjct: 241 DPPGELRNMSQLLDAIIRHVPPPAAKLDEPFQMLVSMMERDFYLGRILTGRIASGVVRTG 300

Query: 889 XXVHGIHHKDSGVVKTEEGKVTK 957
             VHG+  KDSGV K EEGKV K
Sbjct: 301 DRVHGLRVKDSGVEKIEEGKVVK 323


>ref|XP_003539953.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  392 bits (1007), Expect = e-107
 Identities = 211/317 (66%), Positives = 234/317 (73%), Gaps = 4/317 (1%)
 Frame = +1

Query: 19  MANPLLRSLFSASTTYHHRSRTLQSSLLQRISG---LTRSFXXXXXXXXXXLD-TYLDPS 186
           MA P+LRSL+S++      S +  SS     S     +R+F             + LDPS
Sbjct: 1   MAGPILRSLWSSTRKSFSSSFSSSSSPSAPFSHSRFFSRTFAAAPAAATTATTASSLDPS 60

Query: 187 KLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNG 366
            LRNVAVIAHVDHGKTTLMDRLLRQCGAD+PHERAMDSISLERERGITISSKVTS+ W  
Sbjct: 61  HLRNVAVIAHVDHGKTTLMDRLLRQCGADLPHERAMDSISLERERGITISSKVTSVSWKE 120

Query: 367 YELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPILLM 546
            ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKYGLRPILL+
Sbjct: 121 NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 180

Query: 547 NKVDRPSVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPENA 726
           NKVDRP+VSEE CDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS++FTK PP +A
Sbjct: 181 NKVDRPAVSEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPADA 240

Query: 727 RNMSPLLDAIINHVTPPTANTEAPFQMLVSMMERDFYLXXXXXXXXXXXXXXXXXXVHGI 906
           RNMS LLDA++ HV PP A+ +APFQMLVSMME+DFYL                  VHG+
Sbjct: 241 RNMSQLLDAVVRHVPPPNASIDAPFQMLVSMMEKDFYLGRILTGRIYSGIVRVGDRVHGL 300

Query: 907 HHKDSGVVKTEEGKVTK 957
            +KDSG  K E+GKV K
Sbjct: 301 RNKDSGAEKIEDGKVVK 317


>ref|XP_003527397.1| PREDICTED: GTP-binding protein TypA/BipA homolog [Glycine max]
          Length = 670

 Score =  392 bits (1007), Expect = e-107
 Identities = 209/317 (65%), Positives = 233/317 (73%), Gaps = 4/317 (1%)
 Frame = +1

Query: 19  MANPLLRSLFSASTTYHHRSRTL--QSSLLQRISGLTRSFXXXXXXXXXXLDTY--LDPS 186
           M  P++RSL+S++      S +    S  L      +R+F            T   LDPS
Sbjct: 1   MVGPIIRSLWSSTRKSFSSSSSSFSPSPPLSHSRFFSRAFAAAPATAPAAATTASSLDPS 60

Query: 187 KLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPWNG 366
           +LRN+AVIAHVDHGKTTLMDRLLRQCGAD+PHERAMDSISLERERGITISSKVTS+ W  
Sbjct: 61  RLRNLAVIAHVDHGKTTLMDRLLRQCGADLPHERAMDSISLERERGITISSKVTSVSWKE 120

Query: 367 YELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPILLM 546
            ELNMVDTPGHADF             AILVVDAGEGPLAQTKFVLAKALKYGLRPILL+
Sbjct: 121 NELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLL 180

Query: 547 NKVDRPSVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPENA 726
           NKVDRP+VSEE CDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWAS++FTK PP +A
Sbjct: 181 NKVDRPAVSEETCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPADA 240

Query: 727 RNMSPLLDAIINHVTPPTANTEAPFQMLVSMMERDFYLXXXXXXXXXXXXXXXXXXVHGI 906
           RNMS LLDA++ HV PP AN +APFQMLVSMME+DFYL                  VHG+
Sbjct: 241 RNMSQLLDAVVRHVPPPNANIDAPFQMLVSMMEKDFYLGRILTGRIFSGVVRVGDKVHGL 300

Query: 907 HHKDSGVVKTEEGKVTK 957
            +KDSG  K E+GKV K
Sbjct: 301 RNKDSGAEKIEDGKVVK 317


>ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
           vinifera] gi|302143376|emb|CBI21937.3| unnamed protein
           product [Vitis vinifera]
          Length = 672

 Score =  391 bits (1004), Expect = e-106
 Identities = 214/319 (67%), Positives = 235/319 (73%), Gaps = 6/319 (1%)
 Frame = +1

Query: 19  MANPLLRSLFSA---STTYHHRSRTLQSSLLQRISGLT--RSFXXXXXXXXXXLD-TYLD 180
           MA PLLRSL+S    S +    S  L+  L  R    T  R F             + LD
Sbjct: 1   MAGPLLRSLWSTTRKSLSSSSPSAPLRPFLCPRPHAYTLPRCFSAVAGAAAAAAPGSSLD 60

Query: 181 PSKLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITISSKVTSIPW 360
           P++LRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERA+DSISLERERGITI+SKVT+I W
Sbjct: 61  PNRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERALDSISLERERGITIASKVTAILW 120

Query: 361 NGYELNMVDTPGHADFXXXXXXXXXXXXXAILVVDAGEGPLAQTKFVLAKALKYGLRPIL 540
              ELNMVDTPGHADF             A+LVVDAGEGPLAQTKFVLAKALKYGLRPIL
Sbjct: 121 KENELNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLAKALKYGLRPIL 180

Query: 541 LMNKVDRPSVSEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSSFTKGPPE 720
           L+NKVDRP+V+EERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASS+FTK PP+
Sbjct: 181 LLNKVDRPAVTEERCDEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASSTFTKSPPD 240

Query: 721 NARNMSPLLDAIINHVTPPTANTEAPFQMLVSMMERDFYLXXXXXXXXXXXXXXXXXXVH 900
           N ++MS LLDAII HV PPTA+ +APFQMLVSMME+DFYL                  VH
Sbjct: 241 NTKSMSELLDAIIRHVPPPTASLDAPFQMLVSMMEKDFYLGRILTGRVSSGVIRVGDRVH 300

Query: 901 GIHHKDSGVVKTEEGKVTK 957
           G+   DSGV K EEGKV K
Sbjct: 301 GLRSTDSGVEKIEEGKVLK 319


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