BLASTX nr result

ID: Cimicifuga21_contig00014396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014396
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   194   1e-47
ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   186   4e-45
ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2...   166   4e-39
ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumi...   160   3e-37
ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycin...   158   1e-36

>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  194 bits (494), Expect = 1e-47
 Identities = 83/173 (47%), Positives = 117/173 (67%), Gaps = 8/173 (4%)
 Frame = +2

Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEINPEELKPKI--------YLNYGHLP 352
           K LTE    LK  R++ +YNM KEHL+ L S L++NP +++ ++        + N   L 
Sbjct: 158 KTLTEHYQALKCVRINGVYNMKKEHLETLSSYLQMNPAKMEGQMQQLCFFHDHRNISVLR 217

Query: 353 SPSDSNPIDIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVDQ 532
                 PID+E+CP+CNEVR+VF+CPRE C+ K ER++A C+GC  CIPRCE CG C++ 
Sbjct: 218 VEESYRPIDLEICPRCNEVRMVFDCPRETCKKKRERAMAECRGCYFCIPRCEECGKCIEV 277

Query: 533 DETGETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDAC 691
           +E GE  C DV+C +CWL+LPKCN CN+PYC+RH  ++Q +   S+GF+C  C
Sbjct: 278 EEPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRH-ANLQHSTSGSTGFICCIC 329


>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
           gi|223532808|gb|EEF34583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  186 bits (473), Expect = 4e-45
 Identities = 80/175 (45%), Positives = 116/175 (66%), Gaps = 5/175 (2%)
 Frame = +2

Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEINPEELKPKIYLNYGHLPSPSDSNP- 373
           K L++  N LK  +++ IYN+ K+HL+ LYS L++NP + KP+  L + +  SPS  +  
Sbjct: 158 KILSQHPNSLKSLQINGIYNLKKQHLETLYSYLQMNPSQHKPQHILYHIYRISPSSRSTE 217

Query: 374 ----IDIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVDQDET 541
               +D+++CP+CNEV++VF+C RE C  K +R +A C+GC  CI RCE CGGC+D +E 
Sbjct: 218 SGRIVDVDICPQCNEVQIVFDCSRETCMQKRDRLVADCRGCNFCISRCEECGGCIDAEEQ 277

Query: 542 GETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDACSSEME 706
            + AC D++C +CWL L KCN CNKPYC RH    Q++ P   GF+C+AC    E
Sbjct: 278 EDAACADILCSDCWLCLSKCNYCNKPYCKRHTNQ-QFSSPGFCGFICEACHMTSE 331


>ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score =  166 bits (421), Expect = 4e-39
 Identities = 73/172 (42%), Positives = 107/172 (62%)
 Frame = +2

Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEINPEELKPKIYLNYGHLPSPSDSNPI 376
           K L++  N L+  +++ I+N+ KEHL+ + S L++NP   KP+  L             I
Sbjct: 143 KTLSQHHNSLESLQINGIHNLKKEHLETISSHLQMNPPHQKPQPILRM-----------I 191

Query: 377 DIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVDQDETGETAC 556
           D+++CPKCNEVR VF+CPR   +S  E S   C+GC  CI RCE CG CVD +E  ET C
Sbjct: 192 DVDICPKCNEVRTVFDCPRATSKSGREHSFTHCRGCYFCISRCEECGQCVDDEELEETLC 251

Query: 557 LDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDACSSEMEQW 712
             ++C +CWL LPKC  CN+ YC +H    + + P+S+GF+CD C+ ++E +
Sbjct: 252 FGILCTDCWLLLPKCCFCNQAYCKQHENQ-RCSLPDSTGFLCDLCNEKLETY 302


>ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumis sativus]
          Length = 336

 Score =  160 bits (405), Expect = 3e-37
 Identities = 78/176 (44%), Positives = 110/176 (62%), Gaps = 11/176 (6%)
 Frame = +2

Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEIN-----PEELKPKIYLNYGHLPSP- 358
           K L++ S+ LK   +  IYN+  +HL+VL S L  N      +E +   +L + H+  P 
Sbjct: 161 KTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPR 220

Query: 359 ---SDSNP-IDIEVCPKCNEVRLVFECPRENCRSKN-ERSLAACKGCLHCIPRCEGCGGC 523
              SD  P ID+++CPKC ++R V++C RE C+ K  E  LA C+GC+ CIPRCE CGGC
Sbjct: 221 LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGC 280

Query: 524 VDQDETGETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDAC 691
           VD DE  E  C D++C  CW +LPKCN CN+PYC RH  ++     +++GFVC+ C
Sbjct: 281 VDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNV---SSSTAGFVCEIC 333


>ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycine max]
           gi|255635560|gb|ACU18130.1| unknown [Glycine max]
          Length = 278

 Score =  158 bits (400), Expect = 1e-36
 Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 9/174 (5%)
 Frame = +2

Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLY------SCLEINPEELKPKIY---LNYGHL 349
           K L + SN LK   ++ IYN+ KEHL +L         LE   ++ +P  Y    ++   
Sbjct: 95  KTLCQRSNCLKTLSINGIYNIQKEHLDMLIMNLGKNQPLEEQQKQQQPVYYHERCSFSVF 154

Query: 350 PSPSDSNPIDIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVD 529
                   ID+E+CP+C EVR+V++CP+E+C ++ E  LA C+GC  CIPRCE CGGC++
Sbjct: 155 KQEESWRLIDLEICPRCFEVRMVYDCPKEHC-TRREWPLAPCRGCNFCIPRCENCGGCIE 213

Query: 530 QDETGETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDAC 691
             E  E AC D+ CLECWL+LPKC+ CNKPYC +H     W   + S  +C  C
Sbjct: 214 SGEVEEGACEDIFCLECWLQLPKCSFCNKPYCKQHTN--WWCTSSDSSLICKVC 265


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