BLASTX nr result
ID: Cimicifuga21_contig00014396
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00014396 (809 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ... 194 1e-47 ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm... 186 4e-45 ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2... 166 4e-39 ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumi... 160 3e-37 ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycin... 158 1e-36 >ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera] Length = 338 Score = 194 bits (494), Expect = 1e-47 Identities = 83/173 (47%), Positives = 117/173 (67%), Gaps = 8/173 (4%) Frame = +2 Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEINPEELKPKI--------YLNYGHLP 352 K LTE LK R++ +YNM KEHL+ L S L++NP +++ ++ + N L Sbjct: 158 KTLTEHYQALKCVRINGVYNMKKEHLETLSSYLQMNPAKMEGQMQQLCFFHDHRNISVLR 217 Query: 353 SPSDSNPIDIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVDQ 532 PID+E+CP+CNEVR+VF+CPRE C+ K ER++A C+GC CIPRCE CG C++ Sbjct: 218 VEESYRPIDLEICPRCNEVRMVFDCPRETCKKKRERAMAECRGCYFCIPRCEECGKCIEV 277 Query: 533 DETGETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDAC 691 +E GE C DV+C +CWL+LPKCN CN+PYC+RH ++Q + S+GF+C C Sbjct: 278 EEPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRH-ANLQHSTSGSTGFICCIC 329 >ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis] gi|223532808|gb|EEF34583.1| conserved hypothetical protein [Ricinus communis] Length = 332 Score = 186 bits (473), Expect = 4e-45 Identities = 80/175 (45%), Positives = 116/175 (66%), Gaps = 5/175 (2%) Frame = +2 Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEINPEELKPKIYLNYGHLPSPSDSNP- 373 K L++ N LK +++ IYN+ K+HL+ LYS L++NP + KP+ L + + SPS + Sbjct: 158 KILSQHPNSLKSLQINGIYNLKKQHLETLYSYLQMNPSQHKPQHILYHIYRISPSSRSTE 217 Query: 374 ----IDIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVDQDET 541 +D+++CP+CNEV++VF+C RE C K +R +A C+GC CI RCE CGGC+D +E Sbjct: 218 SGRIVDVDICPQCNEVQIVFDCSRETCMQKRDRLVADCRGCNFCISRCEECGGCIDAEEQ 277 Query: 542 GETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDACSSEME 706 + AC D++C +CWL L KCN CNKPYC RH Q++ P GF+C+AC E Sbjct: 278 EDAACADILCSDCWLCLSKCNYCNKPYCKRHTNQ-QFSSPGFCGFICEACHMTSE 331 >ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1| predicted protein [Populus trichocarpa] Length = 306 Score = 166 bits (421), Expect = 4e-39 Identities = 73/172 (42%), Positives = 107/172 (62%) Frame = +2 Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEINPEELKPKIYLNYGHLPSPSDSNPI 376 K L++ N L+ +++ I+N+ KEHL+ + S L++NP KP+ L I Sbjct: 143 KTLSQHHNSLESLQINGIHNLKKEHLETISSHLQMNPPHQKPQPILRM-----------I 191 Query: 377 DIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVDQDETGETAC 556 D+++CPKCNEVR VF+CPR +S E S C+GC CI RCE CG CVD +E ET C Sbjct: 192 DVDICPKCNEVRTVFDCPRATSKSGREHSFTHCRGCYFCISRCEECGQCVDDEELEETLC 251 Query: 557 LDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDACSSEMEQW 712 ++C +CWL LPKC CN+ YC +H + + P+S+GF+CD C+ ++E + Sbjct: 252 FGILCTDCWLLLPKCCFCNQAYCKQHENQ-RCSLPDSTGFLCDLCNEKLETY 302 >ref|XP_004150124.1| PREDICTED: F-box protein SKIP28-like [Cucumis sativus] Length = 336 Score = 160 bits (405), Expect = 3e-37 Identities = 78/176 (44%), Positives = 110/176 (62%), Gaps = 11/176 (6%) Frame = +2 Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLYSCLEIN-----PEELKPKIYLNYGHLPSP- 358 K L++ S+ LK + IYN+ +HL+VL S L N +E + +L + H+ P Sbjct: 161 KTLSQDSHNLKNLMIGGIYNIENQHLEVLRSHLLENRSLNKQQEWRQVHHLYHEHVDRPR 220 Query: 359 ---SDSNP-IDIEVCPKCNEVRLVFECPRENCRSKN-ERSLAACKGCLHCIPRCEGCGGC 523 SD P ID+++CPKC ++R V++C RE C+ K E LA C+GC+ CIPRCE CGGC Sbjct: 221 LLSSDFLPVIDVQICPKCYDIRNVYDCSRERCKIKQGENLLADCRGCICCIPRCEECGGC 280 Query: 524 VDQDETGETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDAC 691 VD DE E C D++C CW +LPKCN CN+PYC RH ++ +++GFVC+ C Sbjct: 281 VDDDEIEEAICSDILCSSCWFQLPKCNHCNRPYCKRHRDNV---SSSTAGFVCEIC 333 >ref|NP_001240191.1| uncharacterized protein LOC100806504 [Glycine max] gi|255635560|gb|ACU18130.1| unknown [Glycine max] Length = 278 Score = 158 bits (400), Expect = 1e-36 Identities = 74/174 (42%), Positives = 103/174 (59%), Gaps = 9/174 (5%) Frame = +2 Query: 197 KRLTEGSNKLKVTRLDNIYNMTKEHLQVLY------SCLEINPEELKPKIY---LNYGHL 349 K L + SN LK ++ IYN+ KEHL +L LE ++ +P Y ++ Sbjct: 95 KTLCQRSNCLKTLSINGIYNIQKEHLDMLIMNLGKNQPLEEQQKQQQPVYYHERCSFSVF 154 Query: 350 PSPSDSNPIDIEVCPKCNEVRLVFECPRENCRSKNERSLAACKGCLHCIPRCEGCGGCVD 529 ID+E+CP+C EVR+V++CP+E+C ++ E LA C+GC CIPRCE CGGC++ Sbjct: 155 KQEESWRLIDLEICPRCFEVRMVYDCPKEHC-TRREWPLAPCRGCNFCIPRCENCGGCIE 213 Query: 530 QDETGETACLDVVCLECWLRLPKCNLCNKPYCNRHVGSIQWNQPNSSGFVCDAC 691 E E AC D+ CLECWL+LPKC+ CNKPYC +H W + S +C C Sbjct: 214 SGEVEEGACEDIFCLECWLQLPKCSFCNKPYCKQHTN--WWCTSSDSSLICKVC 265