BLASTX nr result

ID: Cimicifuga21_contig00014387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014387
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284232.1| PREDICTED: mitochondrial GTPase 1 isoform 2 ...   414   e-113
ref|XP_002284228.1| PREDICTED: mitochondrial GTPase 1 isoform 1 ...   414   e-113
emb|CBI29821.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_002308022.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_002533440.1| GTP binding protein, putative [Ricinus commu...   395   e-107

>ref|XP_002284232.1| PREDICTED: mitochondrial GTPase 1 isoform 2 [Vitis vinifera]
          Length = 377

 Score =  414 bits (1064), Expect = e-113
 Identities = 209/264 (79%), Positives = 228/264 (86%), Gaps = 1/264 (0%)
 Frame = +1

Query: 181 EMGFNKGGGAINWFPGHMAAATRAIRDRLKLSDLVIEVRDARIPISSVNGDLQSILSSKR 360
           EMGFNKGGGAINWFPGHMAAATRAIR RLK+SDLVIEVRDAR+P+SS N DLQ  LS KR
Sbjct: 15  EMGFNKGGGAINWFPGHMAAATRAIRHRLKVSDLVIEVRDARLPLSSANEDLQPSLSGKR 74

Query: 361 RIIALNKKDLANPNIMHKWLQYFDSKNQDCLLMNAHSKNSXXXXXXXXXXXXXXXISREP 540
           R+IALNKKDLANPNIMHKW  YFDS  QDC+ +NAHS++S               ISREP
Sbjct: 75  RVIALNKKDLANPNIMHKWTHYFDSCKQDCISINAHSRSSVKKLLELVELKLREVISREP 134

Query: 541 TLLVMVVGVPNVGKSSLINSINQIASTRFPAQDKKKRATVGPLPGVTQDIAGFKIAHQPS 720
           TLLVMVVGVPNVGKS+LINSI+QIA++RFP Q+K KRATVGPLPGVTQDIAGFKIAHQPS
Sbjct: 135 TLLVMVVGVPNVGKSALINSIHQIATSRFPVQEKMKRATVGPLPGVTQDIAGFKIAHQPS 194

Query: 721 IYVLDTPGVLVPSIPDIETGLKLALTGSVKDSVVGEERLAQYLLAVLNSRSTPLHWKHLN 900
           IYVLDTPGVLVPSIPDIETGLKLAL GSVKDSVVGEER+AQYLLAVLN+RSTPLHW+HLN
Sbjct: 195 IYVLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRSTPLHWRHLN 254

Query: 901 NRRMEGIRYEANDKED-RMKDLLP 969
           NRR+E +R E  DK D  +KDLLP
Sbjct: 255 NRRIEELRNEYEDKHDYNLKDLLP 278


>ref|XP_002284228.1| PREDICTED: mitochondrial GTPase 1 isoform 1 [Vitis vinifera]
          Length = 376

 Score =  414 bits (1064), Expect = e-113
 Identities = 209/264 (79%), Positives = 228/264 (86%), Gaps = 1/264 (0%)
 Frame = +1

Query: 181 EMGFNKGGGAINWFPGHMAAATRAIRDRLKLSDLVIEVRDARIPISSVNGDLQSILSSKR 360
           EMGFNKGGGAINWFPGHMAAATRAIR RLK+SDLVIEVRDAR+P+SS N DLQ  LS KR
Sbjct: 14  EMGFNKGGGAINWFPGHMAAATRAIRHRLKVSDLVIEVRDARLPLSSANEDLQPSLSGKR 73

Query: 361 RIIALNKKDLANPNIMHKWLQYFDSKNQDCLLMNAHSKNSXXXXXXXXXXXXXXXISREP 540
           R+IALNKKDLANPNIMHKW  YFDS  QDC+ +NAHS++S               ISREP
Sbjct: 74  RVIALNKKDLANPNIMHKWTHYFDSCKQDCISINAHSRSSVKKLLELVELKLREVISREP 133

Query: 541 TLLVMVVGVPNVGKSSLINSINQIASTRFPAQDKKKRATVGPLPGVTQDIAGFKIAHQPS 720
           TLLVMVVGVPNVGKS+LINSI+QIA++RFP Q+K KRATVGPLPGVTQDIAGFKIAHQPS
Sbjct: 134 TLLVMVVGVPNVGKSALINSIHQIATSRFPVQEKMKRATVGPLPGVTQDIAGFKIAHQPS 193

Query: 721 IYVLDTPGVLVPSIPDIETGLKLALTGSVKDSVVGEERLAQYLLAVLNSRSTPLHWKHLN 900
           IYVLDTPGVLVPSIPDIETGLKLAL GSVKDSVVGEER+AQYLLAVLN+RSTPLHW+HLN
Sbjct: 194 IYVLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRSTPLHWRHLN 253

Query: 901 NRRMEGIRYEANDKED-RMKDLLP 969
           NRR+E +R E  DK D  +KDLLP
Sbjct: 254 NRRIEELRNEYEDKHDYNLKDLLP 277


>emb|CBI29821.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  412 bits (1059), Expect = e-113
 Identities = 208/263 (79%), Positives = 227/263 (86%), Gaps = 1/263 (0%)
 Frame = +1

Query: 184 MGFNKGGGAINWFPGHMAAATRAIRDRLKLSDLVIEVRDARIPISSVNGDLQSILSSKRR 363
           MGFNKGGGAINWFPGHMAAATRAIR RLK+SDLVIEVRDAR+P+SS N DLQ  LS KRR
Sbjct: 1   MGFNKGGGAINWFPGHMAAATRAIRHRLKVSDLVIEVRDARLPLSSANEDLQPSLSGKRR 60

Query: 364 IIALNKKDLANPNIMHKWLQYFDSKNQDCLLMNAHSKNSXXXXXXXXXXXXXXXISREPT 543
           +IALNKKDLANPNIMHKW  YFDS  QDC+ +NAHS++S               ISREPT
Sbjct: 61  VIALNKKDLANPNIMHKWTHYFDSCKQDCISINAHSRSSVKKLLELVELKLREVISREPT 120

Query: 544 LLVMVVGVPNVGKSSLINSINQIASTRFPAQDKKKRATVGPLPGVTQDIAGFKIAHQPSI 723
           LLVMVVGVPNVGKS+LINSI+QIA++RFP Q+K KRATVGPLPGVTQDIAGFKIAHQPSI
Sbjct: 121 LLVMVVGVPNVGKSALINSIHQIATSRFPVQEKMKRATVGPLPGVTQDIAGFKIAHQPSI 180

Query: 724 YVLDTPGVLVPSIPDIETGLKLALTGSVKDSVVGEERLAQYLLAVLNSRSTPLHWKHLNN 903
           YVLDTPGVLVPSIPDIETGLKLAL GSVKDSVVGEER+AQYLLAVLN+RSTPLHW+HLNN
Sbjct: 181 YVLDTPGVLVPSIPDIETGLKLALAGSVKDSVVGEERIAQYLLAVLNTRSTPLHWRHLNN 240

Query: 904 RRMEGIRYEANDKED-RMKDLLP 969
           RR+E +R E  DK D  +KDLLP
Sbjct: 241 RRIEELRNEYEDKHDYNLKDLLP 263


>ref|XP_002308022.1| predicted protein [Populus trichocarpa] gi|222853998|gb|EEE91545.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  401 bits (1030), Expect = e-109
 Identities = 202/264 (76%), Positives = 227/264 (85%), Gaps = 1/264 (0%)
 Frame = +1

Query: 181 EMGFNKGGGAINWFPGHMAAATRAIRDRLKLSDLVIEVRDARIPISSVNGDLQSILSSKR 360
           EMGFN GGGAINWFPGHMAAATRAIRDRLKL+DLVIEVRD+RIP+SS N DLQ  L++KR
Sbjct: 15  EMGFNAGGGAINWFPGHMAAATRAIRDRLKLADLVIEVRDSRIPLSSTNEDLQPQLAAKR 74

Query: 361 RIIALNKKDLANPNIMHKWLQYFDSKNQDCLLMNAHSKNSXXXXXXXXXXXXXXXISREP 540
           R+IALNKKDLANPNIMHKW++YFDS  QDC+ ++AHSK+S               ISREP
Sbjct: 75  RVIALNKKDLANPNIMHKWIRYFDSCKQDCIPISAHSKSSVQKLLEVVEFKLKEVISREP 134

Query: 541 TLLVMVVGVPNVGKSSLINSINQIASTRFPAQDKKKRATVGPLPGVTQDIAGFKIAHQPS 720
           TLLVMVVGVPNVGKS+LINSI+QIA +RF  Q KKKRATVGPLPGVTQDIAG+KIAH+PS
Sbjct: 135 TLLVMVVGVPNVGKSALINSIHQIALSRFAVQGKKKRATVGPLPGVTQDIAGYKIAHKPS 194

Query: 721 IYVLDTPGVLVPSIPDIETGLKLALTGSVKDSVVGEERLAQYLLAVLNSRSTPLHWKHLN 900
           IYVLDTPGVLVPSIPDIETGLKL+L GSVKDSVVGEER+A+YLLAVLN+R TPLHWKH N
Sbjct: 195 IYVLDTPGVLVPSIPDIETGLKLSLAGSVKDSVVGEERIARYLLAVLNTRGTPLHWKHWN 254

Query: 901 NRRMEGIRYEANDKED-RMKDLLP 969
           NR+M+GIRYE+ +K     KDL P
Sbjct: 255 NRKMDGIRYESEEKHKYDPKDLRP 278


>ref|XP_002533440.1| GTP binding protein, putative [Ricinus communis]
           gi|223526714|gb|EEF28947.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 375

 Score =  395 bits (1014), Expect = e-107
 Identities = 198/264 (75%), Positives = 223/264 (84%), Gaps = 1/264 (0%)
 Frame = +1

Query: 181 EMGFNKGGGAINWFPGHMAAATRAIRDRLKLSDLVIEVRDARIPISSVNGDLQSILSSKR 360
           EM FN  GG INWFPGHMAAATRAIR RLKL+DLVIEVRD+RIP+SS N DLQ  L+SKR
Sbjct: 15  EMSFNSEGGVINWFPGHMAAATRAIRSRLKLADLVIEVRDSRIPLSSANNDLQPHLNSKR 74

Query: 361 RIIALNKKDLANPNIMHKWLQYFDSKNQDCLLMNAHSKNSXXXXXXXXXXXXXXXISREP 540
           R+IALNKKDLAN N+MHKW+ YF+S  QD + +N+HSK+S               ISREP
Sbjct: 75  RVIALNKKDLANANVMHKWVHYFNSCKQDSIPVNSHSKSSVMKLLELVELKLKEVISREP 134

Query: 541 TLLVMVVGVPNVGKSSLINSINQIASTRFPAQDKKKRATVGPLPGVTQDIAGFKIAHQPS 720
           TLLVMVVGVPNVGKS+LINSI+QIAS+RFP Q+KKKRATVGPLPGVTQDIAG+KIAHQPS
Sbjct: 135 TLLVMVVGVPNVGKSALINSIHQIASSRFPVQEKKKRATVGPLPGVTQDIAGYKIAHQPS 194

Query: 721 IYVLDTPGVLVPSIPDIETGLKLALTGSVKDSVVGEERLAQYLLAVLNSRSTPLHWKHLN 900
           IYVLDTPGVLVPSIPDIETGLKLAL GSVKDS VGEER+AQYLLAVLN+R TPLHW+H N
Sbjct: 195 IYVLDTPGVLVPSIPDIETGLKLALAGSVKDSAVGEERIAQYLLAVLNTRGTPLHWRHWN 254

Query: 901 NRRMEGIRYEANDK-EDRMKDLLP 969
           NR+M+GI+Y + DK E  +KDL P
Sbjct: 255 NRKMDGIKYNSQDKHECNLKDLRP 278


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