BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014385
         (1516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-lik...   553   e-157
ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, put...   546   e-154
emb|CBI21866.3| unnamed protein product [Vitis vinifera]              541   e-153
gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]          539   e-151
ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis ly...   534   e-150

>ref|XP_002274917.2| PREDICTED: dihydroorotase, mitochondrial-like [Vitis vinifera]
          Length = 377

 Score =  553 bits (1426), Expect(2) = e-157
 Identities = 272/339 (80%), Positives = 298/339 (87%), Gaps = 1/339 (0%)
 Frame = +2

Query: 194  PSKALNFPFGKVGWPRPVST-GVRMELSLTKPDDWHLHLRDGDVLEAVVPHSANHFGRAI 370
            P KA   PF ++  P  V   G RMELSLT+PDDWHLHLRDGD+LEAVV HSA+HFGR I
Sbjct: 8    PCKASILPFARIEVPNQVKVKGARMELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGI 67

Query: 371  VMPNLKPPVTTTAAAMAYRDSILKTLQSNSGFDPLMTLYLTDNTHPDEIKHARRSGVVFA 550
            VMPNLKPP+TTTAAA+AYR+SILK L +N  F PLMTLYLTD T P+EIK AR SGVVFA
Sbjct: 68   VMPNLKPPITTTAAAVAYRESILKALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFA 127

Query: 551  VKLYPAGATTNSQAGVTDLIGNCLPVLKEMVEQNMPLLVHGEATDPKVDMFDREKVFIDT 730
            VKLYPAGATTNSQ GVTDL G CLPVL+EMVEQNMPLLVHGE T+P+VD+FDREKVFI+T
Sbjct: 128  VKLYPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLLVHGEVTNPEVDVFDREKVFIET 187

Query: 731  ILRPLIQKLPDLKVVMEHITTQDAVGFIESCKEGLIAATVTPQHLLMNRNALFQGGLQPH 910
            +LRPLIQK P LKVVMEHITT DAV F+ESC EG +AATVTPQHL++NRN+LFQGGLQPH
Sbjct: 188  VLRPLIQKFPRLKVVMEHITTMDAVRFVESCNEGSVAATVTPQHLVLNRNSLFQGGLQPH 247

Query: 911  NFCLPVLKREIHRQALVSAVTSGSNRYFLGTDSAPHERRRKESSCGCAGVYNAPVALSAY 1090
            N+CLPVLKRE HRQA+VSAVTSGS ++FLGTDSAPHERRRKE  CGCAG+YNAPVALS Y
Sbjct: 248  NYCLPVLKRETHRQAIVSAVTSGSRKFFLGTDSAPHERRRKECPCGCAGIYNAPVALSLY 307

Query: 1091 AKVFEEAGALDKLEAFTSFNGPDFYELPRNESKIKLSKT 1207
            AKVFEEAGALDKLEAFTSFNGPDFY LPRN SKIKLSKT
Sbjct: 308  AKVFEEAGALDKLEAFTSFNGPDFYGLPRNTSKIKLSKT 346



 Score = 30.4 bits (67), Expect(2) = e-157
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3

Query: 1299 PMFAGQTLDWYPSA 1340
            PMFAG+TLDW PS+
Sbjct: 363  PMFAGETLDWLPSS 376


>ref|XP_002517898.1| Dihydroorotase, mitochondrial precursor, putative [Ricinus communis]
            gi|223542880|gb|EEF44416.1| Dihydroorotase, mitochondrial
            precursor, putative [Ricinus communis]
          Length = 398

 Score =  546 bits (1408), Expect(2) = e-154
 Identities = 266/340 (78%), Positives = 298/340 (87%), Gaps = 4/340 (1%)
 Frame = +2

Query: 197  SKALNFPFGKVGWPRPVSTGV----RMELSLTKPDDWHLHLRDGDVLEAVVPHSANHFGR 364
            S AL FP+   G  + +         MEL++T+PDDWHLHLRDG++LEAVVPHSA+HFGR
Sbjct: 27   SSALKFPYTNNGGFKQLKCRASLLSNMELTITRPDDWHLHLRDGEMLEAVVPHSASHFGR 86

Query: 365  AIVMPNLKPPVTTTAAAMAYRDSILKTLQSNSGFDPLMTLYLTDNTHPDEIKHARRSGVV 544
            AI+MPNLKPP+TT  AA+AYR+SILK L +NS F PLMTLYLTD T P+EIK ARRSGVV
Sbjct: 87   AIIMPNLKPPITTAVAALAYRESILKALPANSDFSPLMTLYLTDTTSPNEIKLARRSGVV 146

Query: 545  FAVKLYPAGATTNSQAGVTDLIGNCLPVLKEMVEQNMPLLVHGEATDPKVDMFDREKVFI 724
            FAVKLYPAGATTNSQ GVTDL G CLPVL+EMVEQNMPLLVHGE TDP VD+FDREKVFI
Sbjct: 147  FAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVEQNMPLLVHGEVTDPSVDIFDREKVFI 206

Query: 725  DTILRPLIQKLPDLKVVMEHITTQDAVGFIESCKEGLIAATVTPQHLLMNRNALFQGGLQ 904
            DT+L+PLIQKLP LKVVMEHITT DAV F++SC EG +AATVTPQHL++NRNA+FQGGLQ
Sbjct: 207  DTVLQPLIQKLPRLKVVMEHITTMDAVRFVQSCDEGSVAATVTPQHLVLNRNAIFQGGLQ 266

Query: 905  PHNFCLPVLKREIHRQALVSAVTSGSNRYFLGTDSAPHERRRKESSCGCAGVYNAPVALS 1084
            PHN+CLPVLKRE HRQA+VSAVTSGS R+FLGTDSAPHER+RKE SCGCAG+YNAPVALS
Sbjct: 267  PHNYCLPVLKRETHRQAIVSAVTSGSKRFFLGTDSAPHERKRKECSCGCAGIYNAPVALS 326

Query: 1085 AYAKVFEEAGALDKLEAFTSFNGPDFYELPRNESKIKLSK 1204
             YAK+FEEAGALDKLEAFTSFNGPDFY LPRN SKIKL+K
Sbjct: 327  LYAKIFEEAGALDKLEAFTSFNGPDFYGLPRNASKIKLAK 366



 Score = 25.8 bits (55), Expect(2) = e-154
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 1299 PMFAGQTLDWYPSA 1340
            PM AG+TL+W PS+
Sbjct: 384  PMSAGETLEWQPSS 397


>emb|CBI21866.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  541 bits (1394), Expect(2) = e-153
 Identities = 263/315 (83%), Positives = 287/315 (91%)
 Frame = +2

Query: 263  MELSLTKPDDWHLHLRDGDVLEAVVPHSANHFGRAIVMPNLKPPVTTTAAAMAYRDSILK 442
            MELSLT+PDDWHLHLRDGD+LEAVV HSA+HFGR IVMPNLKPP+TTTAAA+AYR+SILK
Sbjct: 1    MELSLTQPDDWHLHLRDGDLLEAVVSHSASHFGRGIVMPNLKPPITTTAAAVAYRESILK 60

Query: 443  TLQSNSGFDPLMTLYLTDNTHPDEIKHARRSGVVFAVKLYPAGATTNSQAGVTDLIGNCL 622
             L +N  F PLMTLYLTD T P+EIK AR SGVVFAVKLYPAGATTNSQ GVTDL G CL
Sbjct: 61   ALPANCDFTPLMTLYLTDKTSPNEIKLARNSGVVFAVKLYPAGATTNSQDGVTDLFGKCL 120

Query: 623  PVLKEMVEQNMPLLVHGEATDPKVDMFDREKVFIDTILRPLIQKLPDLKVVMEHITTQDA 802
            PVL+EMVEQNMPLLVHGE T+P+VD+FDREKVFI+T+LRPLIQK P LKVVMEHITT DA
Sbjct: 121  PVLEEMVEQNMPLLVHGEVTNPEVDVFDREKVFIETVLRPLIQKFPRLKVVMEHITTMDA 180

Query: 803  VGFIESCKEGLIAATVTPQHLLMNRNALFQGGLQPHNFCLPVLKREIHRQALVSAVTSGS 982
            V F+ESC EG +AATVTPQHL++NRN+LFQGGLQPHN+CLPVLKRE HRQA+VSAVTSGS
Sbjct: 181  VRFVESCNEGSVAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKRETHRQAIVSAVTSGS 240

Query: 983  NRYFLGTDSAPHERRRKESSCGCAGVYNAPVALSAYAKVFEEAGALDKLEAFTSFNGPDF 1162
             ++FLGTDSAPHERRRKE  CGCAG+YNAPVALS YAKVFEEAGALDKLEAFTSFNGPDF
Sbjct: 241  RKFFLGTDSAPHERRRKECPCGCAGIYNAPVALSLYAKVFEEAGALDKLEAFTSFNGPDF 300

Query: 1163 YELPRNESKIKLSKT 1207
            Y LPRN SKIKLSKT
Sbjct: 301  YGLPRNTSKIKLSKT 315



 Score = 30.4 bits (67), Expect(2) = e-153
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +3

Query: 1299 PMFAGQTLDWYPSA 1340
            PMFAG+TLDW PS+
Sbjct: 332  PMFAGETLDWLPSS 345


>gb|ABQ41358.1| mitochondrial dihydroorotase [Brassica napus]
          Length = 374

 Score =  539 bits (1388), Expect = e-151
 Identities = 255/316 (80%), Positives = 288/316 (91%)
 Frame = +2

Query: 257  VRMELSLTKPDDWHLHLRDGDVLEAVVPHSANHFGRAIVMPNLKPPVTTTAAAMAYRDSI 436
            VRM L++T+PDDWHLHLRDGD+L+AVVPHS +HF RAIVMPNLKPPVT+TAAA+ YR+SI
Sbjct: 34   VRMGLTITQPDDWHLHLRDGDLLQAVVPHSVSHFRRAIVMPNLKPPVTSTAAAITYRESI 93

Query: 437  LKTLQSNSGFDPLMTLYLTDNTHPDEIKHARRSGVVFAVKLYPAGATTNSQAGVTDLIGN 616
            +K L + S FDPLMTLYLTD THPDEIK AR SGVV+AVKLYPAGATTNSQ GVTDL G 
Sbjct: 94   MKALPTGSSFDPLMTLYLTDKTHPDEIKLARESGVVYAVKLYPAGATTNSQDGVTDLFGK 153

Query: 617  CLPVLKEMVEQNMPLLVHGEATDPKVDMFDREKVFIDTILRPLIQKLPDLKVVMEHITTQ 796
            CLPVL+EMV+QNMPLLVHGE TDP +D+FDREK+FI+T+L+PLIQ+LP LKVVMEHITT 
Sbjct: 154  CLPVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQRLPQLKVVMEHITTM 213

Query: 797  DAVGFIESCKEGLIAATVTPQHLLMNRNALFQGGLQPHNFCLPVLKREIHRQALVSAVTS 976
            DAV F+ESCKEG + ATVTPQHLL+NRNALFQGGLQPHN+CLPVLKREIHR+A+V AVTS
Sbjct: 214  DAVNFVESCKEGFVGATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREAIVKAVTS 273

Query: 977  GSNRYFLGTDSAPHERRRKESSCGCAGVYNAPVALSAYAKVFEEAGALDKLEAFTSFNGP 1156
            GS ++FLGTDSAPHERRRKESSCGCAG+Y+APVALS YAKVF+EAG+LDKLEAFTSFNGP
Sbjct: 274  GSKKFFLGTDSAPHERRRKESSCGCAGIYSAPVALSLYAKVFDEAGSLDKLEAFTSFNGP 333

Query: 1157 DFYELPRNESKIKLSK 1204
            DFY LPRN SKI L K
Sbjct: 334  DFYGLPRNSSKITLKK 349


>ref|XP_002869797.1| mitochondrial dihydroorotase [Arabidopsis lyrata subsp. lyrata]
            gi|297315633|gb|EFH46056.1| mitochondrial dihydroorotase
            [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score =  534 bits (1376), Expect(2) = e-150
 Identities = 256/317 (80%), Positives = 286/317 (90%)
 Frame = +2

Query: 257  VRMELSLTKPDDWHLHLRDGDVLEAVVPHSANHFGRAIVMPNLKPPVTTTAAAMAYRDSI 436
            VRMEL++T+PDDWHLHLRD D+L AVVPHSA+ F RAIVMPNLKPPVTTTAAA+AYRDSI
Sbjct: 32   VRMELTITQPDDWHLHLRDADLLHAVVPHSASIFKRAIVMPNLKPPVTTTAAAVAYRDSI 91

Query: 437  LKTLQSNSGFDPLMTLYLTDNTHPDEIKHARRSGVVFAVKLYPAGATTNSQAGVTDLIGN 616
            +K L   S FDPLMTLYLTD T PDEIK AR SGVV+AVKLYPAGATTNSQ GVTDL G 
Sbjct: 92   MKALPYGSSFDPLMTLYLTDKTQPDEIKLARESGVVYAVKLYPAGATTNSQDGVTDLFGK 151

Query: 617  CLPVLKEMVEQNMPLLVHGEATDPKVDMFDREKVFIDTILRPLIQKLPDLKVVMEHITTQ 796
            CLPVL+EMV+QNMPLLVHGE TDP +D+FDREK+FI+T+L+PLIQ+LP LKVVMEHITT 
Sbjct: 152  CLPVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQRLPQLKVVMEHITTM 211

Query: 797  DAVGFIESCKEGLIAATVTPQHLLMNRNALFQGGLQPHNFCLPVLKREIHRQALVSAVTS 976
            DAV F+ESCKEG + ATVTPQHLL+NRNALFQGGLQPHN+CLPVLKREIHR+A+V AVTS
Sbjct: 212  DAVNFVESCKEGSVGATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREAIVKAVTS 271

Query: 977  GSNRYFLGTDSAPHERRRKESSCGCAGVYNAPVALSAYAKVFEEAGALDKLEAFTSFNGP 1156
            GS ++FLGTDSAPHER RKESSCGCAG+Y+APVALS YAKVF+EAGALDKLEAFTSFNGP
Sbjct: 272  GSKKFFLGTDSAPHERTRKESSCGCAGIYSAPVALSLYAKVFDEAGALDKLEAFTSFNGP 331

Query: 1157 DFYELPRNESKIKLSKT 1207
            DFY LPRN SK+ L K+
Sbjct: 332  DFYGLPRNSSKVTLKKS 348



 Score = 26.2 bits (56), Expect(2) = e-150
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 1299 PMFAGQTLDWYP 1334
            PMFAG+TL W P
Sbjct: 365  PMFAGETLQWQP 376