BLASTX nr result

ID: Cimicifuga21_contig00014358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014358
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003638765.1| Regulator of nonsense transcripts-like prote...    74   2e-11
ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...    70   1e-10
emb|CBI27489.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_003556787.1| PREDICTED: uncharacterized protein LOC100781...    70   2e-10
gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]               69   5e-10

>ref|XP_003638765.1| Regulator of nonsense transcripts-like protein [Medicago
           truncatula] gi|355504700|gb|AES85903.1| Regulator of
           nonsense transcripts-like protein [Medicago truncatula]
          Length = 1644

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/116 (30%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
 Frame = -1

Query: 385 SCMCTSF---QIEDILHKKIVSKLNESQIDSVNSAVSAIRCNHSVSLHCISGLPGTGKSE 215
           SC CTS      +D  ++++ S LNE+Q  ++++ +S I C+H+ ++  + G PGTGK++
Sbjct: 237 SCDCTSLYDAMWDDCSYRRLSSDLNEAQNTAISNCLSGIHCSHNATVKLVWGPPGTGKTK 296

Query: 214 IGSIIALAALRLKFEVIICVPDKSPLLDVASHYLKIVDGSHNGCNLEDIAVYGNSD 47
               +    +++K+ +++C P    + +VAS  L I   S   C+  D+ ++GN+D
Sbjct: 297 TLGTMLFILMKMKYRILVCAPTNVAIKEVASRVLHIARESQ--CSAGDMLLFGNND 350


>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = -1

Query: 331 SKLNESQIDSVNSAVSAIRCNHSVSLHCISGLPGTGKSEIGSIIALAALRLKFEVIICVP 152
           S LNESQ  +V + +  I+CNH  S+  I G PGTGK++  S++    LR     + C P
Sbjct: 247 SNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGTGKTKTVSVLLFKLLRTNIRTLACAP 306

Query: 151 DKSPLLDVASHYLKIVDGSHNG---CNLEDIAVYGNSD 47
               + +VAS  LK+   S      C+L DI ++GN D
Sbjct: 307 TNVAVTEVASRVLKLTKESFENSLFCSLGDILIFGNKD 344


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
 Frame = -1

Query: 331 SKLNESQIDSVNSAVSAIRCNHSVSLHCISGLPGTGKSEIGSIIALAALRLKFEVIICVP 152
           S LNESQ  +V + +  I+CNH  S+  I G PGTGK++  S++    LR     + C P
Sbjct: 247 SNLNESQTKAVVTCLRKIQCNHKPSVELIWGPPGTGKTKTVSVLLFKLLRTNIRTLACAP 306

Query: 151 DKSPLLDVASHYLKIVDGSHNG---CNLEDIAVYGNSD 47
               + +VAS  LK+   S      C+L DI ++GN D
Sbjct: 307 TNVAVTEVASRVLKLTKESFENSLFCSLGDILIFGNKD 344


>ref|XP_003556787.1| PREDICTED: uncharacterized protein LOC100781902 [Glycine max]
          Length = 1636

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/110 (28%), Positives = 67/110 (60%), Gaps = 6/110 (5%)
 Frame = -1

Query: 358 EDILHKKIVSKLNESQIDSVNSAVSAIRCNHSVSLHCISGLPGTGKSEIGSIIALAALRL 179
           +D  ++ ++S+LNESQ  ++++ +S + CNH+ ++  I G PGTGK+     +  A L++
Sbjct: 233 DDCTYQMLLSELNESQNKAISACLSGLNCNHNSAVKLIWGPPGTGKTRTLGTLLYALLKM 292

Query: 178 KFEVIICVPDKSPLLDVASHYLKIVDGSHNG------CNLEDIAVYGNSD 47
           K+ V++C P    + +VAS  + I+  +H+       C++ ++ ++G ++
Sbjct: 293 KYRVLVCAPTNVAIKEVASRVVDIMKEAHSKESGDLFCSMGEVLLFGYNE 342


>gb|AAF23836.1|AC007234_8 F1E22.16 [Arabidopsis thaliana]
          Length = 1075

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
 Frame = -1

Query: 328 KLNESQIDSVNSAVSAIRCNHSVSLHCISGLPGTGKSEIGSIIALAALRLKFEVIICVPD 149
           KLN SQ D++   + A  CNHS ++  I G PGTGK++  S++ L  L+++   + C P 
Sbjct: 266 KLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPT 325

Query: 148 KSPLLDVASHYLKIVDGS--HNGCNLEDIAVYGNSDEDPLNITGDL 17
              +L+V S  +K+V  S   +G  L DI ++GN +   ++   DL
Sbjct: 326 NIAVLEVCSRLVKLVSESLRFDGYGLGDIVLFGNKERMKIDDREDL 371


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