BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014349
         (1574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   209   2e-51
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   189   1e-45
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   188   4e-45
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   186   1e-44
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   174   6e-41

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  209 bits (531), Expect = 2e-51
 Identities = 151/410 (36%), Positives = 222/410 (54%), Gaps = 13/410 (3%)
 Frame = +3

Query: 243  WSRLPQHLVDSITNRLNL-DDLIRLSCVCQPWNLLSSAL---LPPKQRNPWLIVPFSENT 410
            WS+LP  L++ I+  L +  D +    VC  W          LPP+   PWL++P S++ 
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQL--PWLMLPQSQSQ 62

Query: 411  GKTDSTCDETLGFFSLSNGKVYKVETPQIAER-RICGSCPGGWLITVHENGEIQVLHPFS 587
                        FFSLS  K + +  P+++ R R CGS  G WL+ + +   I +++P +
Sbjct: 63   SNQSRRA-----FFSLSTNKFHFLNLPEVSYRKRHCGSSHG-WLMILDDTPTILLINPLT 116

Query: 588  KAVIDLPPVTKLPGVIGSFVNKEKKLLYSVPVSLGGMHTNQDWASDIIRELYIDKAIMSS 767
            +A + LPP++  P VI SF   +    Y++   LG   T    +   +R+ +I K ++SS
Sbjct: 117  RAKLSLPPLSSFPNVI-SFNYSDIGREYALRNLLGERVTV---SLRQMRDSFIRKVVLSS 172

Query: 768  SD--PTTAIVMSLQGCPKKLAFCRLGKDKTWSLVKGNDNVRLADVIFYQGKFYTVRNSGH 941
            S       +V+++      LA+CR G DK+WSLV+ N      DVIF  G FY V  +G 
Sbjct: 173  SPLKDNNFVVIAILNQTDDLAYCRNG-DKSWSLVE-NARSFCEDVIFVNGMFYAVNKAGQ 230

Query: 942  VFVVGHLDSPSPSITFVINPPHRLAFDKYYLVESSGELLLVMRKRYEPLD-EFDRLDEDP 1118
            + V+  + S SP ++F+   P +   D  YLV S  ELLLV R  Y  L+ EFD  D +P
Sbjct: 231  I-VICDISSDSPRVSFM-ETPRQAGGDMQYLVNSGDELLLVTR--YLDLEYEFDHPDMEP 286

Query: 1119 DSPVSYMTTSFTVSKLDFDGPKWVEVYDLGKDRALFVGFNQSFSLTTSDFPCCKGNCVYF 1298
               + Y T  F V +LD++GP+W+ +  LG D+ALF+G N S SL+ +DF  C GNC+Y+
Sbjct: 287  H--LIYRTIRFEVFRLDWNGPQWLRMSTLG-DKALFIGENSSLSLSATDFSGCMGNCIYY 343

Query: 1299 TDDYL-TNYMGEPFGGHDIGVFNLRYGTVE--KCYPSDAAGIK--PPPVW 1433
            TDDYL  NY G  FG HD+G+F L   T+E   CYP +        PP+W
Sbjct: 344  TDDYLDANYDGH-FGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLW 392


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  189 bits (481), Expect = 1e-45
 Identities = 141/414 (34%), Positives = 215/414 (51%), Gaps = 15/414 (3%)
 Frame = +3

Query: 243  WSRLPQHLVDSITNRLNL-DDLIRLSCVCQPWNLLSSALLPPKQRN-----PWLIVPFSE 404
            WS+L   L+D I  +  +  D +R   VC  W     A +P    +     PWL++P S+
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWR----ASVPKTPHHLPTQLPWLMLPQSQ 59

Query: 405  --NTGKTDSTCDETLGFFSLSNGKVYKVETPQIAERRICGSCPGGWLITVHENGEIQVLH 578
              +T +          FFSLS  K + ++ P+ + RR       GWL+ + E  EI +L+
Sbjct: 60   PHHTHRP---------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLN 110

Query: 579  PFSKAVIDLPPVTKLPGVIG-SFVNKEKKLLYSVPVSLGGMHTNQDWASDIIRELYIDKA 755
            P +++ + LPP++  P V+  +F +  ++  Y++  S G ++T    +   +R+ +I K 
Sbjct: 111  PLTRSKVHLPPLSTFPNVVRFNFADVGRE--YALRTSSGDVYTR---SLKKMRDSFIKKT 165

Query: 756  IMSSS-----DPTTAIVMSLQGCPKKLAFCRLGKDKTWSLVKGNDNVRLADVIFYQGKFY 920
            I+SSS     D    ++++  G    LA CR   D +W+ ++   +    DVIF++G FY
Sbjct: 166  ILSSSPANGSDFIAVVILNQTG---DLALCRKSDD-SWTFLEDAQSYA-EDVIFHRGLFY 220

Query: 921  TVRNSGHVFVVGHLDSPSPSITFVINPPHRLAFDKYYLVESSGELLLVMRKRYEPLDEFD 1100
             V   G + V   +   SP ++ +I  P +   D  YLVES  ELLLV R  Y  L    
Sbjct: 221  AVNKYGSIAVCD-VSGSSPRVS-IIEMPQQFGGDLQYLVESGEELLLVTR--YLDLT--- 273

Query: 1101 RLDEDPD-SPVSYMTTSFTVSKLDFDGPKWVEVYDLGKDRALFVGFNQSFSLTTSDFPCC 1277
              D +PD + + Y TT F V +LD   P+W  V  LG DRALF+G N S SL++ DFP C
Sbjct: 274  -YDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLG-DRALFLGENLSLSLSSVDFPGC 331

Query: 1278 KGNCVYFTDDYLTNYMGEPFGGHDIGVFNLRYGTVEKCYPSDAAGIKPPPVWFT 1439
            KGNC+Y+TDDY  +      G  D+G+FNL  G++E    S      PPP+W T
Sbjct: 332  KGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVT 385


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  188 bits (477), Expect = 4e-45
 Identities = 140/413 (33%), Positives = 214/413 (51%), Gaps = 14/413 (3%)
 Frame = +3

Query: 243  WSRLPQHLVDSITNRLNL-DDLIRLSCVCQPWNLLSSALLPPKQRN-----PWLIVPFSE 404
            WS+L   L+D I  +  +  D +R   VC  W     A +P    +     PWL++P S+
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWR----ASVPKTPHHLPTQLPWLMLPQSQ 59

Query: 405  --NTGKTDSTCDETLGFFSLSNGKVYKVETPQIAERRICGSCPGGWLITVHENGEIQVLH 578
              +T +          FFSLS  K + ++ P+ + RR       GWL+ + E  EI +L+
Sbjct: 60   PHHTHRP---------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLN 110

Query: 579  PFSKAVIDLPPVTKLPGVIG-SFVNKEKKLLYSVPVSLGGMHTNQDWASDIIRELYIDKA 755
            P +++ + LPP++  P V+  +F +  ++  Y++  S G ++T    +   +R+ +I K 
Sbjct: 111  PLTRSKVHLPPLSTFPNVVRFNFADVGRE--YALRTSSGDVYTR---SLKKMRDSFIKKT 165

Query: 756  IMSSS-----DPTTAIVMSLQGCPKKLAFCRLGKDKTWSLVKGNDNVRLADVIFYQGKFY 920
            I+SSS     D    ++++  G    LA CR   D +W+ ++   +    DVIF++G FY
Sbjct: 166  ILSSSPANGSDFIAVVILNQTG---DLALCRKSDD-SWTFLEDAQSYS-EDVIFHRGLFY 220

Query: 921  TVRNSGHVFVVGHLDSPSPSITFVINPPHRLAFDKYYLVESSGELLLVMRKRYEPLDEFD 1100
             V   G + V   +   SP ++ +I  P +   D  YLVES  ELLLV R     LD   
Sbjct: 221  AVNKYGSIAVCD-VSGSSPRVS-IIEMPQQFGGDLQYLVESGEELLLVTRY----LDLTY 274

Query: 1101 RLDEDPDSPVSYMTTSFTVSKLDFDGPKWVEVYDLGKDRALFVGFNQSFSLTTSDFPCCK 1280
             ++ D  S + Y TT F V +LD   P+W  V  LG DRALF+G N S SL++ DFP CK
Sbjct: 275  DVEXDQTSLI-YRTTRFQVCRLDSKAPRWEVVSSLG-DRALFLGENLSLSLSSVDFPGCK 332

Query: 1281 GNCVYFTDDYLTNYMGEPFGGHDIGVFNLRYGTVEKCYPSDAAGIKPPPVWFT 1439
            GNC+Y+TDDY  +      G  D+G+FNL  G++E    S      PPP+W T
Sbjct: 333  GNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVT 385


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  186 bits (473), Expect = 1e-44
 Identities = 135/414 (32%), Positives = 208/414 (50%), Gaps = 15/414 (3%)
 Frame = +3

Query: 243  WSRLPQHLVDSITNRLNL-DDLIRLSCVCQPWNLLSSAL---LPPKQRNPWLIVPFSENT 410
            W++LP  L++ I+ ++ +  D +    VC  W          LPP+   PWL++P S+  
Sbjct: 5    WTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQL--PWLLLPQSQ-- 60

Query: 411  GKTDSTCDETLGFFSLSNGKVYKVETPQIAERRI-CGSCPGGWLITVHENGEIQVLHPFS 587
                S       FF+LS  K + +  P+ + R+  CGS  G WLI + ++  I V++P +
Sbjct: 61   ----SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHG-WLIILDDSPSILVINPLT 115

Query: 588  KAVIDLPPVTKLPGVIG-SFVNKEKKLLYSVPVSLGGMHTNQDWASDIIRELYIDKAIMS 764
            +  I LP ++  P V+   + N  ++ L   P       + +      +R+ +I K +MS
Sbjct: 116  RRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQ-----MRDGFIKKVVMS 170

Query: 765  SSDPTTA----IVMSLQGCPKKLAFCRLGKDKTWSLVKGNDNVRLADVIFYQGKFYTVRN 932
            SS         + M++      LA+C+ G D+ W++V+ N      DVI++ G FY V  
Sbjct: 171  SSPLEKKGDFFVAMAILCSTGDLAYCKNG-DECWNIVE-NSRSFSEDVIYFNGLFYAVNK 228

Query: 933  SGHVFVVGHLDSPSPSITFVINPPHRLAFDKYYLVESSGELLLVMRKRYEPLD-EFDRLD 1109
            +G + VV  ++  SP ++F I  P ++  D  YLV S   LLLV R  Y  LD EFD   
Sbjct: 229  AGQI-VVCDVNGNSPKVSF-IETPRQIGGDMQYLVSSGDGLLLVTR--YLDLDVEFDIF- 283

Query: 1110 EDPDSPVSYMTTSFTVSKLDFDGPKWVEVYDLGKDRALFVGFNQSFSLTTSDFPCCKGNC 1289
                    Y T  F V KLD +GP+W  V  LG D  LF+G N S +L+ S    C G+C
Sbjct: 284  -------IYKTARFEVFKLDLNGPRWERVTSLG-DMMLFIGENSSLALSASGLSGCMGDC 335

Query: 1290 VYFTDDYLTNYMGEPFGGHDIGVFNLRYGTVE--KCYPSDAAGIK--PPPVWFT 1439
            +Y+TDDY  N      G HD+G+F L  G++E   CYP ++      PPP+W +
Sbjct: 336  IYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWIS 389


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
            gi|223551309|gb|EEF52795.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  174 bits (441), Expect = 6e-41
 Identities = 134/438 (30%), Positives = 209/438 (47%), Gaps = 37/438 (8%)
 Frame = +3

Query: 237  NQWSRLPQHLVDSITNRL-NLDDLIRLSCVCQPWNLLSSALLPPKQRN-----PWLIVPF 398
            + WS LPQ L+ +IT +  N  D I    VC+ W     + +P K  +     PWL++P+
Sbjct: 2    SNWSELPQELLQTITQKQSNYVDYISTRAVCKSW----WSAIPKKPHDLLCQLPWLLLPY 57

Query: 399  SENTGKTDSTCDETLGFFSLSNGKVYKVETPQIAERRICGSCPGGWLITVHENGEIQVLH 578
             +N            GF++L++GK Y +E P+  E+R CGS  G WL+ V +   I +L+
Sbjct: 58   HKNN-------PNHRGFYNLADGKTYHLELPETIEKRCCGSSHG-WLVMVEDTPSIFLLN 109

Query: 579  PFSKAVIDLPPVTKLPGVIGSFVNKEKKLLYSVPVSLGGMHTNQDWASDIIRELYIDKAI 758
            P +KA I+LP ++  P      V +  + +     +   +          IRE YI KAI
Sbjct: 110  PLTKARIELPSLSTFPYFPTEVVYENSRNINEYFNTKAKLR---------IRETYIRKAI 160

Query: 759  MSSSDPTTA--IVMSLQ---GCPKKLAFCRLGKDKTW-SLVKGNDNVRLADVIFYQGKFY 920
            +S  DP+T    VM++       + +AFC+ G D TW ++ + +  +   DV+F++GKFY
Sbjct: 161  VSE-DPSTGNFAVMAIYKTINSTENIAFCKSG-DATWFTIQETSQKIHYQDVMFHRGKFY 218

Query: 921  TVRNSGHVFVVGHLDSPSPSITFVINPPH---RLAFDKYYLVESSGELLLVMRKRYEPLD 1091
             V + G V +    D   PS+  V +PP     + + ++YL     +L+L  R R     
Sbjct: 219  AVDDKGRVSIC-ITDINPPSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFR----- 272

Query: 1092 EFDRLDEDPDSPVSYMTTSFTVSKLDFDGPKWVEVYDLGKDRALFVGFNQSFSLTTSDFP 1271
                  +   S   Y T  F V KLD     W+E+  LG D   F+G+N   S++T ++ 
Sbjct: 273  ------KYRGSGYEYQTHKFMVYKLDASSSNWLELDGLG-DMLSFLGWNCFHSISTQNYR 325

Query: 1272 CCKGNCVYFTDDYLTNYMGEPFGGHDIGVFNLRYGTVEK----CYP-------------- 1397
               GNC+YFTDD        P+ GHD G+FNL   +V++     YP              
Sbjct: 326  NYSGNCIYFTDDKFIVGSDFPWEGHDYGIFNLDDKSVQRLGLPSYPIKLPILPFIYGYER 385

Query: 1398 ----SDAAGIKPPPVWFT 1439
                  ++ I PPP+W T
Sbjct: 386  SLKRDRSSFILPPPIWVT 403