BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014348
         (1659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   189   2e-45
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   187   5e-45
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   182   3e-43
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-42
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...   162   3e-37

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  189 bits (480), Expect = 2e-45
 Identities = 148/410 (36%), Positives = 208/410 (50%), Gaps = 13/410 (3%)
 Frame = -3

Query: 1570 WSQLPEHLFDLMTKRLEL-EDLIRFSCVCRTWKSFXXXXXXXXXXP--WLIVPYED--YT 1406
            WSQL   L D + K+ ++  D +RF  VC  W++              WL++P     +T
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1405 SKEGTICDKTLGFFNLSNGKVYKVETPAIADRRICGSCRGGWLITVHENGEIQVFHPFAK 1226
             +          FF+LS  K + ++ P  + RR       GWL+ + E  EI + +P  +
Sbjct: 64   HRP---------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTR 114

Query: 1225 SVVDLPPITELPGVSG-SFVDNDNDLVYNVPTGIGKEEDRNNVISSCIREFCIFKAIMSS 1049
            S V LPP++  P V   +F D   +  Y + T  G    R+      +R+  I K I+SS
Sbjct: 115  SKVHLPPLSTFPNVVRFNFADVGRE--YALRTSSGDVYTRS---LKKMRDSFIKKTILSS 169

Query: 1048 S--NPTTGIVVAIQGVGRYLTFCRPGNDNTWRSLEGADNGRFADITFYQGKFYAVNNAGS 875
            S  N +  I V I      L  CR  +D++W  LE A +    D+ F++G FYAVN  GS
Sbjct: 170  SPANGSDFIAVVILNQTGDLALCRK-SDDSWTFLEDAQSYA-EDVIFHRGLFYAVNKYGS 227

Query: 874  VFVVEGVDSGSPFTKLVITPPRANYLDKYYLVESLGELLLISRMRYGPMGYLDL---MEE 704
            + V + V   SP   ++  P +    D  YLVES  ELLL++R       YLDL   +E 
Sbjct: 228  IAVCD-VSGSSPRVSIIEMPQQFGG-DLQYLVESGEELLLVTR-------YLDLTYDVEP 278

Query: 703  DPAS--YKTTNFIVTKLDIDGHTLMDVEDLGTDRALFVGYNHSFSLSTSDFPCCKGNSIY 530
            D  S  Y+TT F V +LD+       V  LG DRALF+G N S SLS+ DFP CKGN IY
Sbjct: 279  DQTSLIYRTTRFQVCRLDLKAPRWEVVSSLG-DRALFLGENLSLSLSSVDFPGCKGNCIY 337

Query: 529  FTDDCLEEYMNQPFGGHDLGVFNLKYGGIEKCYPSNSKLMKPPPVWFTTN 380
            +TDD  E+  +   G  DLG+FNL+ G IE    S+ ++  PPP+W T N
Sbjct: 338  YTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  187 bits (476), Expect = 5e-45
 Identities = 148/410 (36%), Positives = 207/410 (50%), Gaps = 13/410 (3%)
 Frame = -3

Query: 1570 WSQLPEHLFDLMTKRLEL-EDLIRFSCVCRTWKSFXXXXXXXXXXP--WLIVPYED--YT 1406
            WSQL   L D + K+ ++  D +RF  VC  W++              WL++P     +T
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1405 SKEGTICDKTLGFFNLSNGKVYKVETPAIADRRICGSCRGGWLITVHENGEIQVFHPFAK 1226
             +          FF+LS  K + ++ P  + RR       GWL+ + E  EI + +P  +
Sbjct: 64   HRP---------FFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTR 114

Query: 1225 SVVDLPPITELPGVSG-SFVDNDNDLVYNVPTGIGKEEDRNNVISSCIREFCIFKAIMSS 1049
            S V LPP++  P V   +F D   +  Y + T  G    R+      +R+  I K I+SS
Sbjct: 115  SKVHLPPLSTFPNVVRFNFADVGRE--YALRTSSGDVYTRS---LKKMRDSFIKKTILSS 169

Query: 1048 S--NPTTGIVVAIQGVGRYLTFCRPGNDNTWRSLEGADNGRFADITFYQGKFYAVNNAGS 875
            S  N +  I V I      L  CR  +D++W  LE A +    D+ F++G FYAVN  GS
Sbjct: 170  SPANGSDFIAVVILNQTGDLALCRK-SDDSWTFLEDAQSYS-EDVIFHRGLFYAVNKYGS 227

Query: 874  VFVVEGVDSGSPFTKLVITPPRANYLDKYYLVESLGELLLISRMRYGPMGYLDL---MEE 704
            + V + V   SP   ++  P +    D  YLVES  ELLL++R       YLDL   +E 
Sbjct: 228  IAVCD-VSGSSPRVSIIEMPQQFGG-DLQYLVESGEELLLVTR-------YLDLTYDVEX 278

Query: 703  DPAS--YKTTNFIVTKLDIDGHTLMDVEDLGTDRALFVGYNHSFSLSTSDFPCCKGNSIY 530
            D  S  Y+TT F V +LD        V  LG DRALF+G N S SLS+ DFP CKGN IY
Sbjct: 279  DQTSLIYRTTRFQVCRLDSKAPRWEVVSSLG-DRALFLGENLSLSLSSVDFPGCKGNCIY 337

Query: 529  FTDDCLEEYMNQPFGGHDLGVFNLKYGGIEKCYPSNSKLMKPPPVWFTTN 380
            +TDD  E+  +   G  DLG+FNL+ G IE    S+ ++  PPP+W T N
Sbjct: 338  YTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  182 bits (461), Expect = 3e-43
 Identities = 143/414 (34%), Positives = 205/414 (49%), Gaps = 17/414 (4%)
 Frame = -3

Query: 1570 WSQLPEHLFDLMTKRLEL-EDLIRFSCVCRTWKSFXXXXXXXXXXP--WLIVPYEDYTSK 1400
            WSQLP  L ++++K L +  D +    VC  W+               WL++P     S 
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQSQSN 64

Query: 1399 EGTICDKTLGFFNLSNGKVYKVETPAIADR-RICGSCRGGWLITVHENGEIQVFHPFAKS 1223
            +         FF+LS  K + +  P ++ R R CGS  G WL+ + +   I + +P  ++
Sbjct: 65   QSR-----RAFFSLSTNKFHFLNLPEVSYRKRHCGSSHG-WLMILDDTPTILLINPLTRA 118

Query: 1222 VVDLPPITELPGVSGSFVDNDNDLVYNVPTGIGKEEDRNNVISSCIREFCIFKAIMSSS- 1046
             + LPP++  P V  SF  +D    Y +   +G   +R  V    +R+  I K ++SSS 
Sbjct: 119  KLSLPPLSSFPNVI-SFNYSDIGREYALRNLLG---ERVTVSLRQMRDSFIRKVVLSSSP 174

Query: 1045 -NPTTGIVVAIQGVGRYLTFCRPGNDNTWRSLEGADNGRFADITFYQGKFYAVNNAGSVF 869
                  +V+AI      L +CR G D +W  +E A      D+ F  G FYAVN AG + 
Sbjct: 175  LKDNNFVVIAILNQTDDLAYCRNG-DKSWSLVENA-RSFCEDVIFVNGMFYAVNKAGQIV 232

Query: 868  VVEGVDSGSPFTKLVITPPRANYLDKYYLVESLGELLLISRMRYGPMGYLDLMEE----- 704
            + + + S SP    + TP +A   D  YLV S  ELLL++R       YLDL  E     
Sbjct: 233  ICD-ISSDSPRVSFMETPRQAGG-DMQYLVNSGDELLLVTR-------YLDLEYEFDHPD 283

Query: 703  -DP-ASYKTTNFIVTKLDIDGHTLMDVEDLGTDRALFVGYNHSFSLSTSDFPCCKGNSIY 530
             +P   Y+T  F V +LD +G   + +  LG D+ALF+G N S SLS +DF  C GN IY
Sbjct: 284  MEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG-DKALFIGENSSLSLSATDFSGCMGNCIY 342

Query: 529  FTDDCLEEYMNQPFGGHDLGVFNLKYGGIE--KCYPSN--SKLMKPPPVWFTTN 380
            +TDD L+   +  FG HDLG+F L    IE   CYP N  S L   PP+W + N
Sbjct: 343  YTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  179 bits (454), Expect = 2e-42
 Identities = 138/411 (33%), Positives = 197/411 (47%), Gaps = 14/411 (3%)
 Frame = -3

Query: 1570 WSQLPEHLFDLMTKRLEL-EDLIRFSCVCRTWKSFXXXXXXXXXXP--WLIVPYEDYTSK 1400
            W+QLP  L ++++K++ +  D + F  VC  WKS              WL++P       
Sbjct: 5    WTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSNQS 64

Query: 1399 EGTICDKTLGFFNLSNGKVYKVETPAIADRRI-CGSCRGGWLITVHENGEIQVFHPFAKS 1223
                      FFNLS  K + +  P  + R+  CGS  G WLI + ++  I V +P  + 
Sbjct: 65   SYR------AFFNLSTYKFHSLNLPEASHRKKHCGSSHG-WLIILDDSPSILVINPLTRR 117

Query: 1222 VVDLPPITELPGV-SGSFVDNDNDLVYNVPTGIGKEEDRNNVISSCIREFCIFKAIMSSS 1046
             + LP I+  P V S  + +   + +   P G     +RN      +R+  I K +MSSS
Sbjct: 118  KIHLPAISSFPNVVSFDYANVGREYLLVNPQG-----ERNTASLRQMRDGFIKKVVMSSS 172

Query: 1045 ----NPTTGIVVAIQGVGRYLTFCRPGNDNTWRSLEGADNGRFADITFYQGKFYAVNNAG 878
                     + +AI      L +C+ G D  W  +E + +    D+ ++ G FYAVN AG
Sbjct: 173  PLEKKGDFFVAMAILCSTGDLAYCKNG-DECWNIVENSRSFS-EDVIYFNGLFYAVNKAG 230

Query: 877  SVFVVEGVDSGSPFTKLVITPPRANYLDKYYLVESLGELLLISRMRYGPMGYLDL-MEED 701
             + V + V+  SP    + TP +    D  YLV S   LLL++R       YLDL +E D
Sbjct: 231  QIVVCD-VNGNSPKVSFIETPRQIGG-DMQYLVSSGDGLLLVTR-------YLDLDVEFD 281

Query: 700  PASYKTTNFIVTKLDIDGHTLMDVEDLGTDRALFVGYNHSFSLSTSDFPCCKGNSIYFTD 521
               YKT  F V KLD++G     V  LG D  LF+G N S +LS S    C G+ IY+TD
Sbjct: 282  IFIYKTARFEVFKLDLNGPRWERVTSLG-DMMLFIGENSSLALSASGLSGCMGDCIYYTD 340

Query: 520  DCLEEYMNQPFGGHDLGVFNLKYGGIE--KCYPSN--SKLMKPPPVWFTTN 380
            D      +   G HDLG+F L  G IE   CYP N  S+L  PPP+W + N
Sbjct: 341  DYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
            gi|223551310|gb|EEF52796.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 406

 Score =  162 bits (409), Expect = 3e-37
 Identities = 129/431 (29%), Positives = 190/431 (44%), Gaps = 34/431 (7%)
 Frame = -3

Query: 1570 WSQLPEHLFDLMT-KRLELEDLIRFSCVCRTWKSFXXXXXXXXXXP--WLIVPYEDYTSK 1400
            WS+LP+ L   +T K+    D I    VC++W S              WL++P+      
Sbjct: 4    WSELPQELLQTITQKQTNYVDYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKDNPN 63

Query: 1399 EGTICDKTLGFFNLSNGKVYKVETPAIADRRICGSCRGGWLITVHENGEIQVFHPFAKSV 1220
                     GF+N S+GK Y +E P   D+R CGS   GWL+ V +   I + +P  KS 
Sbjct: 64   HR-------GFYNPSDGKTYHLELPETVDKRCCGSSH-GWLVMVEDTPSIFLLNPLTKSR 115

Query: 1219 VDLPPITELPGVSGSFVDNDNDLVYNVPTGIGKEEDRNNVISSCIREFCIFKAIMSSSNP 1040
            ++LP ++  P           +++Y     + +   RNN +   IRE  I KAI+ S +P
Sbjct: 116  IELPSLSTFPNF-------PTEVIYQNSRNLNEYFIRNNKLR--IRETYIRKAIV-SEDP 165

Query: 1039 TTG--IVVAIQGV---GRYLTFCRPGNDNTWRSLEGADNGRFADITFYQGKFYAVNNAGS 875
            + G  +V+AI         + FC+ G+   + + E +    + D+ F++GKFY VN+ G 
Sbjct: 166  SVGSFMVMAIYKTINGSENIAFCKSGDAALFTTQETSQEIHYQDVMFHRGKFYMVNDKGR 225

Query: 874  VFVVEGVDSGSPFTKLVITPPRANYL---DKYYLVESLGELLLISRMR-YGPMGYLDLME 707
            V +    D   P    V  PP    L    ++YL     +L+L+ R R Y   GY     
Sbjct: 226  VSICI-TDINPPSVIHVADPPPVPLLMGYKQWYLATLNEDLILVGRFRNYRVSGY----- 279

Query: 706  EDPASYKTTNFIVTKLDIDGHTLMDVEDLGTDRALFVGYNHSFSLSTSDFPCCKGNSIYF 527
                 Y+T  FIV KLD        ++ LG D   F+G+N   S+S  +   C GN IYF
Sbjct: 280  ----EYQTHKFIVYKLDSSSSNWSKLDGLG-DMIFFLGWNCFDSISAHNCGNCSGNCIYF 334

Query: 526  TDDCLEEYMNQPFGGHDLGVFNLKYGGIEKCYP----------------------SNSKL 413
            TDD      +  + GHD GVFN   G + +  P                        S  
Sbjct: 335  TDDNFIVDSDFSWEGHDYGVFNFDDGSVRRLDPPSYPIKPHFLPLVFFHERSLKRDRSSF 394

Query: 412  MKPPPVWFTTN 380
            + PPPVW T N
Sbjct: 395  VLPPPVWVTIN 405