BLASTX nr result

ID: Cimicifuga21_contig00014304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014304
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003579126.1| PREDICTED: F-box protein CPR30-like [Brachyp...    65   3e-08
gb|EEC84760.1| hypothetical protein OsI_31771 [Oryza sativa Indi...    60   9e-07
emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    60   9e-07
ref|NP_001063476.1| Os09g0479100 [Oryza sativa Japonica Group] g...    59   1e-06
emb|CAJ19342.1| FIMBRIATA-like protein [Triticum aestivum]             57   5e-06

>ref|XP_003579126.1| PREDICTED: F-box protein CPR30-like [Brachypodium distachyon]
          Length = 540

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 21/181 (11%)
 Frame = +2

Query: 32  WGFGYAPLSKKYKYVHF--------SVVKQPIMRSIAAVFTLGDQSWRQVPVPS----DI 175
           + FG+ P++++YK  HF        +  +     S+  V+TLGD+ WR +P P     DI
Sbjct: 155 YNFGFHPVTEEYKITHFLGDCADAEAHPRNKHRFSVIQVYTLGDEKWRDIPTPEILSLDI 214

Query: 176 HLWRSPVYCNGSLYWSLAQLSGHDQSQHLVMSFDLE---------TENVRPRRVFPNGTT 328
                 V  +G ++W   Q++     QH V+SFDL+          E    R     G  
Sbjct: 215 VRNSGVVNVDGKMFWLTEQMTA--SWQHAVISFDLKEECFSMIQLPEEREDRAYIQYGPR 272

Query: 329 SNLTGSCYSTYLTVLGESVAFVIRSASGLQEVWMLIDEVEDVWVQKYCLHPPTPRSDNVH 508
                        +  +S +F +R   G  ++W L + +E  W +KY +  P       H
Sbjct: 273 EFWIRDIDDKICIITAQSASFDVRFLVGELQIWTLDNILEQRWSKKYSIQNPPNYIPGPH 332

Query: 509 F 511
           F
Sbjct: 333 F 333


>gb|EEC84760.1| hypothetical protein OsI_31771 [Oryza sativa Indica Group]
          Length = 835

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 49/189 (25%), Positives = 88/189 (46%), Gaps = 13/189 (6%)
 Frame = +2

Query: 32   WGFGYAPLSKKYKYVHF---SVVKQPIMRSIAAVFTLGDQSWRQVPVPSDIHL----WRS 190
            + FG+ P++K+YK +HF     +      SI  V+TLGD+ WR V  P  + L       
Sbjct: 486  YSFGFHPVTKQYKVMHFLRDEHLHVGTSFSIIQVYTLGDEKWRDVRTPQALSLRCVERSG 545

Query: 191  PVYCNGSLYWSLAQLSGHDQS--QHLVMSFDLETENVRPRRVFPNGTTSNLTGSCYSTYL 364
             V  +G++YW    L+  ++S  +H V++FDL  E  +  ++      + + G      +
Sbjct: 546  VVNVDGAMYW----LTEDEESVWKHAVVTFDLSEELFQWLQLPAVDPANYVLGDPDQWLI 601

Query: 365  TVLGESVAFVIRSASGLQEVWMLIDEVEDVWVQKYCLHPPTPRSDNVHF----KLSSLSM 532
            T +  +V+ V    +G   +W +  ++E  W QKY +          H+    K+     
Sbjct: 602  TEVDSNVS-VSYYETGKLHIWTIDSKIEQSWSQKYNIRLSMLEVPGPHWICGDKIILHDF 660

Query: 533  NQDLYGMEI 559
            N++LY  E+
Sbjct: 661  NKNLYFYEL 669


>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
 Frame = +2

Query: 35  GFGYAPLSKKYKYVHFSVVKQPIMRSIAAVFTLGDQSWRQVPVPSDIHLWRS--PVYCNG 208
           G GY P + KYK V   +      R    + TLG+ SWRQ+ VP  +   R+  P+YC G
Sbjct: 153 GLGYDPWNMKYKVVRSYIDNSKFTRF--EIITLGEASWRQLDVPCRVVCGRNSRPIYCEG 210

Query: 209 SLYWSLAQLSGHDQSQHLVMSFDLETEN-----VRPRRVFPNGTTSNLTGSCY----STY 361
           +LYW L +   H      +++FDL  E      + P    P G      GS +    +  
Sbjct: 211 ALYWILDK-KFHYDGDGCILAFDLREEKFGMIALPPNIRMPTGNPGLYNGSLHLLNVAGC 269

Query: 362 LTVLGESVAFV 394
           LTV+ +   F+
Sbjct: 270 LTVIADECQFL 280


>ref|NP_001063476.1| Os09g0479100 [Oryza sativa Japonica Group]
           gi|52077285|dbj|BAD46327.1| unknown protein [Oryza
           sativa Japonica Group] gi|113631709|dbj|BAF25390.1|
           Os09g0479100 [Oryza sativa Japonica Group]
           gi|215693321|dbj|BAG88703.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222641782|gb|EEE69914.1| hypothetical protein
           OsJ_29762 [Oryza sativa Japonica Group]
          Length = 503

 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 13/189 (6%)
 Frame = +2

Query: 32  WGFGYAPLSKKYKYVHF---SVVKQPIMRSIAAVFTLGDQSWRQVPVPSDIHL----WRS 190
           + FG+ P++K+YK +HF     +      SI  V+TLGD+ WR V  P  + L       
Sbjct: 154 YSFGFHPVTKQYKVMHFLRDEHLHVGTSFSIIQVYTLGDEKWRDVRTPQALSLRCVERSG 213

Query: 191 PVYCNGSLYWSLAQLSGHDQS--QHLVMSFDLETENVRPRRVFPNGTTSNLTGSCYSTYL 364
            V   G++YW    L+  ++S  +H V++FDL  E  +  ++      + + G      +
Sbjct: 214 VVNVGGAMYW----LTEDEESVWKHAVVTFDLSEELFQWLQLPAVDPANYVLGDPDQWLI 269

Query: 365 TVLGESVAFVIRSASGLQEVWMLIDEVEDVWVQKYCLHPPTPRSDNVHF----KLSSLSM 532
           T +  +V+ V    +G   +W +  ++E  W QKY +          H+    K+     
Sbjct: 270 TEVDSNVS-VSYYETGKLHIWTIDSKIEQSWSQKYNIRLSMLEVPGPHWICGDKIILHDF 328

Query: 533 NQDLYGMEI 559
           N++LY  E+
Sbjct: 329 NKNLYFYEL 337


>emb|CAJ19342.1| FIMBRIATA-like protein [Triticum aestivum]
          Length = 378

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 25/202 (12%)
 Frame = +2

Query: 32  WGFGYAPLSKKYKYVHFSVVKQPIMR----SIAAVFTLGDQSWRQVPVPSDIHLW----R 187
           + FG++P + +YK VHF   ++        S+  V+TLGD  WR V     + L+     
Sbjct: 186 YSFGFSPATNEYKIVHFLPGQKLHPAGGSFSVIQVYTLGDDKWRDVRTLEVVSLYCVKQS 245

Query: 188 SPVYCNGSLYWSLAQLSGHDQSQH---LVMSFDLETENVR----PRRVFPNGTTSNLTGS 346
             V  +G++YW       HD+  +    V+SFDL  E +     P+  F +   +N    
Sbjct: 246 GVVNVDGAMYWLT-----HDKESNWRRAVISFDLRDECLEIIRLPKVDFADPAFAN--PF 298

Query: 347 CYSTYLTVLGESVAFVIRSA------SGLQEVWMLIDEVEDVWVQKYCLHPPTPRSDNVH 508
           CY  ++T +   V+     A      +    +W L ++VE  W QKY +  P       H
Sbjct: 299 CY--WITEIDSKVSVAAVQARRDSVLARKLHIWTLDNKVEKSWTQKYSIELPALSVLGPH 356

Query: 509 F----KLSSLSMNQDLYGMEIT 562
           F    K+   S N  +Y  E+T
Sbjct: 357 FIYEDKIIMHSRNGGIYCHELT 378


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