BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014298
         (1742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1...   326   1e-86
ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing pr...   326   1e-86
ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing pr...   314   4e-83
emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]   314   4e-83
ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80

>ref|XP_004159957.1| PREDICTED: LOW QUALITY PROTEIN: ribosomal L1 domain-containing
            protein 1-like [Cucumis sativus]
          Length = 364

 Score =  326 bits (835), Expect = 1e-86
 Identities = 174/296 (58%), Positives = 204/296 (68%), Gaps = 1/296 (0%)
 Frame = -2

Query: 1585 KVSTETVGKAVDALLKWIKSKAKHQKSQLFEQDEFLYLILTLKKIPPKGRTNPYKIPLPN 1406
            KV  ET  KAV++LL+W  SK   +K QLF+Q++FLYLI+TLKKIPPKGRTNPYKIPLP+
Sbjct: 11   KVRRETAAKAVESLLQWRNSK--REKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPLPH 68

Query: 1405 SLHPFDSSEELCLIFDDRSKSKLTSESAKKKIQSENIPXXXXXXXXXXXSDYRAFEAKRK 1226
            SLH    S ELCLI DDR+KS LT + A+KKIQSENIP           SDYR FEAKRK
Sbjct: 69   SLH--SDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK 126

Query: 1225 LCNSYDMFFADKRIIPLLPRLLGXXXXXXXXXXXXXELSHKNWKEQIEFACQSALLYLRT 1046
            LC+SYDMFFAD R+IPLLP LLG              L HKNWKEQ+E +C S LLYLRT
Sbjct: 127  LCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLRT 186

Query: 1045 GTCSVVKVGRISQSRDEIISNVVAAIDGIAGIVPKKWGNVRSFHLKLTESLALPIYQTVP 866
            GTCSVVKV R S   +EI+ NV+AAIDGIA +VPKKW NVRSF LK+ ES+ALPIYQTVP
Sbjct: 187  GTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFXLKVLESIALPIYQTVP 246

Query: 865  EVGLKID-GVRKDEEERKVESQAXXXXXXXXXXXXXXXXXXXXXGRIHEVRYLDND 701
            E+  KI+ GV+  E+E   E +A                     GRIHE+RY+D +
Sbjct: 247  ELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIHEIRYMDTN 302


>ref|XP_004143917.1| PREDICTED: ribosomal L1 domain-containing protein 1-like isoform 1
            [Cucumis sativus] gi|449452342|ref|XP_004143918.1|
            PREDICTED: ribosomal L1 domain-containing protein 1-like
            isoform 2 [Cucumis sativus]
          Length = 364

 Score =  326 bits (835), Expect = 1e-86
 Identities = 174/296 (58%), Positives = 204/296 (68%), Gaps = 1/296 (0%)
 Frame = -2

Query: 1585 KVSTETVGKAVDALLKWIKSKAKHQKSQLFEQDEFLYLILTLKKIPPKGRTNPYKIPLPN 1406
            KV  ET  KAV++LL+W  SK   +K QLF+Q++FLYLI+TLKKIPPKGRTNPYKIPLP+
Sbjct: 11   KVRRETAAKAVESLLQWRNSK--REKPQLFDQEDFLYLIVTLKKIPPKGRTNPYKIPLPH 68

Query: 1405 SLHPFDSSEELCLIFDDRSKSKLTSESAKKKIQSENIPXXXXXXXXXXXSDYRAFEAKRK 1226
            SLH    S ELCLI DDR+KS LT + A+KKIQSENIP           SDYR FEAKRK
Sbjct: 69   SLH--SDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRK 126

Query: 1225 LCNSYDMFFADKRIIPLLPRLLGXXXXXXXXXXXXXELSHKNWKEQIEFACQSALLYLRT 1046
            LC+SYDMFFAD R+IPLLP LLG              L HKNWKEQ+E +C S LLYLRT
Sbjct: 127  LCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSGLLYLRT 186

Query: 1045 GTCSVVKVGRISQSRDEIISNVVAAIDGIAGIVPKKWGNVRSFHLKLTESLALPIYQTVP 866
            GTCSVVKV R S   +EI+ NV+AAIDGIA +VPKKW NVRSF LK+ ES+ALPIYQTVP
Sbjct: 187  GTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALPIYQTVP 246

Query: 865  EVGLKID-GVRKDEEERKVESQAXXXXXXXXXXXXXXXXXXXXXGRIHEVRYLDND 701
            E+  KI+ GV+  E+E   E +A                     GRIHE+RY+D +
Sbjct: 247  ELKFKIEAGVKGKEDEITKEEEAAKSPTPVKVGSKKERKLSKKKGRIHEIRYMDTN 302


>ref|XP_002283850.1| PREDICTED: ribosomal L1 domain-containing protein 1-like [Vitis
            vinifera]
          Length = 394

 Score =  314 bits (805), Expect = 4e-83
 Identities = 172/302 (56%), Positives = 208/302 (68%), Gaps = 3/302 (0%)
 Frame = -2

Query: 1582 VSTETVGKAVDALLKWIKSKAKHQKSQLFEQDE--FLYLILTLKKIPPKGRTNPYKIPLP 1409
            V+ ET+ KA  ALLKW  SK+  QK QL  QDE  F+YLILTLKKIPPKGRTNP+KIPLP
Sbjct: 7    VAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKGRTNPHKIPLP 66

Query: 1408 NSLHPFDSSEELCLIFDDRSKSKLTSESAKKKIQSENIPXXXXXXXXXXXSDYRAFEAKR 1229
            + LH   +SE LCLI DDR  S LTS++AK K++SENIP           S++R FEAKR
Sbjct: 67   HPLHTPPNSE-LCLIVDDRPNSHLTSQAAKTKVKSENIPVSKVLSLSKLKSNFRPFEAKR 125

Query: 1228 KLCNSYDMFFADKRIIPLLPRLLGXXXXXXXXXXXXXELSHKNWKEQIEFACQSALLYLR 1049
            KLC+SYD F ADKRI+PLLP+LLG             +L HKNWKEQI+ AC SALLYLR
Sbjct: 126  KLCDSYDFFLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQIDRACGSALLYLR 185

Query: 1048 TGTCSVVKVGRISQSRDEIISNVVAAIDGIAGIVPKKWGNVRSFHLKLTESLALPIYQTV 869
            TGTCSVV+VG++S  +++I+ NVVAAIDG+  +VPKK   VRS HLKL ESLALP+YQ V
Sbjct: 186  TGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAGVRSLHLKLLESLALPVYQAV 245

Query: 868  PEVGLKIDGV-RKDEEERKVESQAXXXXXXXXXXXXXXXXXXXXXGRIHEVRYLDNDVDG 692
            P++ LKI+GV  K+ EE K E ++                     GRIHEVRY+D DV G
Sbjct: 246  PDMRLKIEGVLEKESEEVKEEEES-------GRVEKGEKKKVGKKGRIHEVRYMDGDVGG 298

Query: 691  ML 686
            +L
Sbjct: 299  LL 300


>emb|CAN65947.1| hypothetical protein VITISV_020727 [Vitis vinifera]
          Length = 394

 Score =  314 bits (805), Expect = 4e-83
 Identities = 172/302 (56%), Positives = 208/302 (68%), Gaps = 3/302 (0%)
 Frame = -2

Query: 1582 VSTETVGKAVDALLKWIKSKAKHQKSQLFEQDE--FLYLILTLKKIPPKGRTNPYKIPLP 1409
            V+ ET+ KA  ALLKW  SK+  QK QL  QDE  F+YLILTLKKIPPKGRTNP+KIPLP
Sbjct: 7    VAAETIEKATTALLKWQASKSNGQKPQLLNQDEDRFIYLILTLKKIPPKGRTNPHKIPLP 66

Query: 1408 NSLHPFDSSEELCLIFDDRSKSKLTSESAKKKIQSENIPXXXXXXXXXXXSDYRAFEAKR 1229
            + LH   +SE LCLI DDR  S LTS++AK K++SENIP           S++R FEAKR
Sbjct: 67   HPLHTPPNSE-LCLIVDDRPNSHLTSQAAKTKVKSENIPVSKVLSLSKLKSNFRPFEAKR 125

Query: 1228 KLCNSYDMFFADKRIIPLLPRLLGXXXXXXXXXXXXXELSHKNWKEQIEFACQSALLYLR 1049
            KLC+SYD F ADKRI+PLLP+LLG             +L HKNWKEQI+ AC SALLYLR
Sbjct: 126  KLCDSYDFFLADKRIVPLLPKLLGKHFFKKRKIPVAVDLGHKNWKEQIDRACGSALLYLR 185

Query: 1048 TGTCSVVKVGRISQSRDEIISNVVAAIDGIAGIVPKKWGNVRSFHLKLTESLALPIYQTV 869
            TGTCSVV+VG++S  +++I+ NVVAAIDG+  +VPKK   VRS HLKL ESLALP+YQ V
Sbjct: 186  TGTCSVVRVGKLSMEKEQIVENVVAAIDGVVELVPKKLAGVRSLHLKLLESLALPVYQAV 245

Query: 868  PEVGLKIDGV-RKDEEERKVESQAXXXXXXXXXXXXXXXXXXXXXGRIHEVRYLDNDVDG 692
            P++ LKI+GV  K+ EE K E ++                     GRIHEVRY+D DV G
Sbjct: 246  PDMRLKIEGVLEKESEEVKEEEES-------GRVEKGEKKKVGKKGRIHEVRYMDGDVGG 298

Query: 691  ML 686
            +L
Sbjct: 299  LL 300


>ref|XP_002321931.1| predicted protein [Populus trichocarpa] gi|222868927|gb|EEF06058.1|
            predicted protein [Populus trichocarpa]
          Length = 384

 Score =  305 bits (781), Expect = 2e-80
 Identities = 168/297 (56%), Positives = 201/297 (67%), Gaps = 3/297 (1%)
 Frame = -2

Query: 1582 VSTETVGKAVDALLKWIKSKAKHQKSQLFEQDEFLYLILTLKKIPPKG--RTNPYKIPLP 1409
            VS +TV KAV+ALLKW  S    QK QL EQDEF YLILTLKKIP KG  R N +KIPLP
Sbjct: 12   VSPKTVEKAVNALLKWRSSTLNTQKPQLLEQDEFFYLILTLKKIPQKGVSRINAHKIPLP 71

Query: 1408 NSL-HPFDSSEELCLIFDDRSKSKLTSESAKKKIQSENIPXXXXXXXXXXXSDYRAFEAK 1232
            NSL +P   + E+CLI DDR KS L  ++AKKKIQ++N+P           +DYR FEAK
Sbjct: 72   NSLINPLIEAPEICLIIDDRPKSGLNKDAAKKKIQNDNLPISKIIKVSKLKTDYRPFEAK 131

Query: 1231 RKLCNSYDMFFADKRIIPLLPRLLGXXXXXXXXXXXXXELSHKNWKEQIEFACQSALLYL 1052
            RKL +SYDMFFADKR++PLLP++LG             +L H NWKEQI+ AC SALLYL
Sbjct: 132  RKLRDSYDMFFADKRVVPLLPKMLGKQFFKKKKIPVTLDLKHHNWKEQIDKACGSALLYL 191

Query: 1051 RTGTCSVVKVGRISQSRDEIISNVVAAIDGIAGIVPKKWGNVRSFHLKLTESLALPIYQT 872
            R+GTCSVVKVGR+S SR+EI  NV+AAI+GIA IVP+KWG VRSFHLKL +SLALP+YQ 
Sbjct: 192  RSGTCSVVKVGRVSMSREEIAKNVMAAINGIADIVPRKWGGVRSFHLKLLDSLALPVYQV 251

Query: 871  VPEVGLKIDGVRKDEEERKVESQAXXXXXXXXXXXXXXXXXXXXXGRIHEVRYLDND 701
            VP+  LKIDG  K++E  +                          GRI EVRY+DN+
Sbjct: 252  VPDSKLKIDGGPKEQENDE-------GVVSVEEEKAKEGRVGKKKGRIQEVRYMDNN 301