BLASTX nr result
ID: Cimicifuga21_contig00014279
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00014279
(920 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ... 204 3e-50
emb|CBI18302.3| unnamed protein product [Vitis vinifera] 204 3e-50
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ... 191 2e-46
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ... 191 2e-46
ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus commun... 184 2e-44
>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
vinifera]
Length = 564
Score = 204 bits (518), Expect = 3e-50
Identities = 108/210 (51%), Positives = 142/210 (67%), Gaps = 3/210 (1%)
Frame = -1
Query: 920 QRRLYLYGALFLPLRRIEYKS-KAKGVPIA-HIFRNSLKRRGSDAEKVISLHLASEEFLS 747
QRRLYLY ALFLP R+ Y+ KA+ +P+ HI RNSLK R SDA+ V+S+H A E+F+S
Sbjct: 350 QRRLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFIS 409
Query: 746 LIPFITSNE-IEHLEKNSERKSLHVSITSRQRIMAGMLLREIKSFWRXXXXXXXXXXXXX 570
LIPFI S E I+ E + L + +TS+ RI+ G+LLREIK FWR
Sbjct: 410 LIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPND 469
Query: 569 XSYAEAFPKTSADLDKILQLYRGVENIIIELGLDNVWEMKPLVNGKEIMRVLNLKDGDHL 390
++ K + LDK +++ VEN I+ LGL+ VWE+KPLVNGK+IM VL LK G L
Sbjct: 470 INHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPL 529
Query: 389 VGEWKEKSIEWQLANPSGIAEECLDWIRQE 300
V +W++K I+WQLA+PSG AEECLDW+RQ+
Sbjct: 530 VRDWQQKLIQWQLAHPSGTAEECLDWMRQK 559
>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 204 bits (518), Expect = 3e-50
Identities = 108/210 (51%), Positives = 142/210 (67%), Gaps = 3/210 (1%)
Frame = -1
Query: 920 QRRLYLYGALFLPLRRIEYKS-KAKGVPIA-HIFRNSLKRRGSDAEKVISLHLASEEFLS 747
QRRLYLY ALFLP R+ Y+ KA+ +P+ HI RNSLK R SDA+ V+S+H A E+F+S
Sbjct: 305 QRRLYLYAALFLPFRKTLYEGGKARKIPVVNHIIRNSLKLRASDADTVVSIHCAVEKFIS 364
Query: 746 LIPFITSNE-IEHLEKNSERKSLHVSITSRQRIMAGMLLREIKSFWRXXXXXXXXXXXXX 570
LIPFI S E I+ E + L + +TS+ RI+ G+LLREIK FWR
Sbjct: 365 LIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTLLYPND 424
Query: 569 XSYAEAFPKTSADLDKILQLYRGVENIIIELGLDNVWEMKPLVNGKEIMRVLNLKDGDHL 390
++ K + LDK +++ VEN I+ LGL+ VWE+KPLVNGK+IM VL LK G L
Sbjct: 425 INHTRDISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQLKSGGPL 484
Query: 389 VGEWKEKSIEWQLANPSGIAEECLDWIRQE 300
V +W++K I+WQLA+PSG AEECLDW+RQ+
Sbjct: 485 VRDWQQKLIQWQLAHPSGTAEECLDWMRQK 514
>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Cucumis sativus]
Length = 577
Score = 191 bits (486), Expect = 2e-46
Identities = 103/218 (47%), Positives = 142/218 (65%), Gaps = 5/218 (2%)
Frame = -1
Query: 920 QRRLYLYGALFLPLRRIEYKSK-AKGVPIA-HIFRNSLKRRGSDAEKVISLHLASEEFLS 747
Q+RL LY +LFLP R+ +K K +K +PI +IFR+SLKR+ SDAE V+++H A E+FLS
Sbjct: 359 QKRLSLYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLS 418
Query: 746 LIPFITSNEIEHLEKNSERKSLH---VSITSRQRIMAGMLLREIKSFWRXXXXXXXXXXX 576
LIP + S E ++ N + V TSR R++ G+LLREIK FW
Sbjct: 419 LIPLLVSKE--EIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYP 476
Query: 575 XXXSYAEAFPKTSADLDKILQLYRGVENIIIELGLDNVWEMKPLVNGKEIMRVLNLKDGD 396
YA+ +L+K +L+ V N I++LGL+NVWEMKPLVNGKEIM +L LK G
Sbjct: 477 ADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAGG 536
Query: 395 HLVGEWKEKSIEWQLANPSGIAEECLDWIRQEFTRKTR 282
LV EW++K + WQLA+PSG +EECLDWIR+ +++ +
Sbjct: 537 PLVREWQQKILAWQLAHPSGTSEECLDWIRETHSKRVK 574
>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
[Cucumis sativus]
Length = 577
Score = 191 bits (486), Expect = 2e-46
Identities = 103/218 (47%), Positives = 142/218 (65%), Gaps = 5/218 (2%)
Frame = -1
Query: 920 QRRLYLYGALFLPLRRIEYKSK-AKGVPIA-HIFRNSLKRRGSDAEKVISLHLASEEFLS 747
Q+RL LY +LFLP R+ +K K +K +PI +IFR+SLKR+ SDAE V+++H A E+FLS
Sbjct: 359 QKRLSLYASLFLPFRKFTFKDKKSKKIPIVNYIFRDSLKRKASDAETVVNVHQALEKFLS 418
Query: 746 LIPFITSNEIEHLEKNSERKSLH---VSITSRQRIMAGMLLREIKSFWRXXXXXXXXXXX 576
LIP + S E ++ N + V TSR R++ G+LLREIK FW
Sbjct: 419 LIPLLVSKE--EIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMATLLYP 476
Query: 575 XXXSYAEAFPKTSADLDKILQLYRGVENIIIELGLDNVWEMKPLVNGKEIMRVLNLKDGD 396
YA+ +L+K +L+ V N I++LGL+NVWEMKPLVNGKEIM +L LK G
Sbjct: 477 ADVDYAQDLLNRHFELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQLKAGG 536
Query: 395 HLVGEWKEKSIEWQLANPSGIAEECLDWIRQEFTRKTR 282
LV EW++K + WQLA+PSG +EECLDWIR+ +++ +
Sbjct: 537 PLVREWQQKILAWQLAHPSGTSEECLDWIRETHSKRVK 574
>ref|XP_002533879.1| poly(A) polymerase, putative [Ricinus communis]
gi|223526180|gb|EEF28510.1| poly(A) polymerase, putative
[Ricinus communis]
Length = 577
Score = 184 bits (468), Expect = 2e-44
Identities = 93/215 (43%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Frame = -1
Query: 920 QRRLYLYGALFLPLRRIEYKSKAKGVPIAH-IFRNSLKRRGSDAEKVISLHLASEEFLSL 744
QRRL LY ALFLP R I Y K K VP+ + IF++SLK++ SD+E V+ +H + E+FL++
Sbjct: 361 QRRLSLYAALFLPFRNIIYIEKGKNVPVVNFIFKDSLKQKASDSETVMKIHKSLEKFLNI 420
Query: 743 IPFITSNE-IEHLEKNSERKSLHVSITSRQRIMAGMLLREIKSFWRXXXXXXXXXXXXXX 567
IP +TS++ + E + + + V +++ R++ G LLREIK FWR
Sbjct: 421 IPLLTSDDDTQPAEVDWALELIDVPFSAKLRVLTGFLLREIKDFWRVALLISTMIYPADI 480
Query: 566 SYAEAFPKTSADLDKILQLYRGVENIIIELGLDNVWEMKPLVNGKEIMRVLNLKDGDHLV 387
++F +LDK +L++ VE+ I + GL+ +W++KPLVNGKEIM VL LK G LV
Sbjct: 481 DSTQSFLDKQFELDKRKELFKTVEDAITKQGLEKIWDVKPLVNGKEIMSVLQLKSGGPLV 540
Query: 386 GEWKEKSIEWQLANPSGIAEECLDWIRQEFTRKTR 282
EW++K + WQLA+P+G AEECLDW+++ ++ R
Sbjct: 541 REWQQKLLAWQLAHPTGTAEECLDWMKETHLKRAR 575