BLASTX nr result

ID: Cimicifuga21_contig00014238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014238
         (1495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   502   e-139
ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   501   e-139
ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820...   491   e-136
ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycin...   487   e-135

>ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
            [Cucumis sativus] gi|449521697|ref|XP_004167866.1|
            PREDICTED: 15-cis-zeta-carotene isomerase,
            chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  502 bits (1292), Expect = e-139
 Identities = 252/352 (71%), Positives = 290/352 (82%)
 Frame = +2

Query: 98   RSNNIKFLAFHKQLKNPIFKTPSNQILHHPFKSLQIFSKIRARTSVEETEGKNSVVLDEF 277
            R + I F  F     N + + P +    H F+  ++ ++  A     E+ G  SV  DE 
Sbjct: 24   RPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAE--ASIGDRESGGSTSVSDDEG 81

Query: 278  QVGEDAATFNLFEQKISSWVYFTGILGVVLFALDALWIDSSFGFGYGKAFIDYVSGISES 457
             VGEDAA F+L EQK++SWVYFT ILGVVLF L+ +WID+S G G GKAF+D VSGIS+S
Sbjct: 82   FVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAG-GVGKAFLDAVSGISDS 140

Query: 458  HEIVMMALILIFAGVHSGMASLRDPGEKLIGPRAYRVLFAGISLPLAVSTVVYFINHRYD 637
            HE+VM+ LI IFA VHSG+ASLRD GEKL+G RA+RVLFAG+SLPLAVSTVVYFINHRYD
Sbjct: 141  HEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPLAVSTVVYFINHRYD 200

Query: 638  GVQLWQLQNVPWLHYLLWVSNFISFIFLYPSTFNLLEVAAVDKPKMHLWETGIMRISRHP 817
            GVQLWQLQ+VP LH L+W+S+F+SFIFLYPSTFNLLEVAAVDKPKMHLWETGI+RI+RHP
Sbjct: 201  GVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKMHLWETGIIRITRHP 260

Query: 818  QMVGQVIWCLAHGIWIGNSVALTASLGLIGHHLFGVWNGDRRLALRYGEAFEVVKSRTSV 997
            QMVGQVIWCLAH IWIGNSVA+ AS+GLIGHHLFGVWNGDRRLA RYG  FE VKSRTS+
Sbjct: 261  QMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKRYGADFEAVKSRTSI 320

Query: 998  VPFAAILDGRQKLPKDYYKEFLRLPYLTITGLTIGIYLAHPLMRAASLRLHW 1153
            +PFAAI+DGRQKLP DYYKEFLRLPYL+IT LTIG YLAHPLM+AAS RLHW
Sbjct: 321  IPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAASFRLHW 372


>ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Vitis
            vinifera]
          Length = 365

 Score =  501 bits (1289), Expect = e-139
 Identities = 256/371 (69%), Positives = 299/371 (80%), Gaps = 3/371 (0%)
 Frame = +2

Query: 50   MASSLLLSNPIFSLSHRSNNIKFLAFHKQLKNPIFKTPSNQIL---HHPFKSLQIFSKIR 220
            MA+SLLLS+   S S  S + + L + +    P  +T +   L   H P  S +   KI 
Sbjct: 1    MATSLLLSSSFLSSSPLSQSRR-LTYARTSCFPYARTSAKLFLKSTHVPSCSFRFCHKIM 59

Query: 221  ARTSVEETEGKNSVVLDEFQVGEDAATFNLFEQKISSWVYFTGILGVVLFALDALWIDSS 400
            A TS+ ETE +    ++   VGED+A F+L +QKISSW+YF GILGVVLF LD +WID+S
Sbjct: 60   AGTSIGETEEEG---VEPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLDVVWIDNS 116

Query: 401  FGFGYGKAFIDYVSGISESHEIVMMALILIFAGVHSGMASLRDPGEKLIGPRAYRVLFAG 580
             GFG  K FI  V+G+SESHE+VM+ L LIFA  HSG+ASLRD GEKLIG RA+RVLFAG
Sbjct: 117  TGFG--KDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERAFRVLFAG 174

Query: 581  ISLPLAVSTVVYFINHRYDGVQLWQLQNVPWLHYLLWVSNFISFIFLYPSTFNLLEVAAV 760
             SLPLAVSTVVYFINHRYDG+QLWQLQ+VP +H L+W S+F+SF FLYPSTFNLLEVAAV
Sbjct: 175  TSLPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFNLLEVAAV 234

Query: 761  DKPKMHLWETGIMRISRHPQMVGQVIWCLAHGIWIGNSVALTASLGLIGHHLFGVWNGDR 940
            DKPKMHLWETGIMRI+RHPQMVGQVIWC+AH +WIGNSVA+ AS+GLIGHHLFGVWNGDR
Sbjct: 235  DKPKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLFGVWNGDR 294

Query: 941  RLALRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITGLTIGIYLAHP 1120
            RLA RYGEAF+ V+ RTS++PFAAILDGRQKLPKDYYKEFLRLPYL+IT LT+G YLAHP
Sbjct: 295  RLASRYGEAFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTLGAYLAHP 354

Query: 1121 LMRAASLRLHW 1153
            LM+AAS RLHW
Sbjct: 355  LMQAASFRLHW 365


>ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|222861864|gb|EEE99406.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  491 bits (1265), Expect = e-136
 Identities = 254/378 (67%), Positives = 289/378 (76%), Gaps = 10/378 (2%)
 Frame = +2

Query: 50   MASSLLLSNPIFSLSHRSNNIKFLAFHKQLKNPIFKT------PSNQILHHPFKSLQI-- 205
            MASSLLLSNP  +  H  NN+        L+     T      PSN   +  F    +  
Sbjct: 1    MASSLLLSNPFLTSPHNPNNLTRRQQPLTLRPSSAFTLLSLTKPSNNNNNPKFLKPTVPF 60

Query: 206  --FSKIRARTSVEETEGKNSVVLDEFQVGEDAATFNLFEQKISSWVYFTGILGVVLFALD 379
              F K   R S ++ +   SV       GED+A F L +QK+SSW+YF+ ILGVVLF LD
Sbjct: 61   LGFKKFATRISTKDADTDTSVPPP--LAGEDSAAFELGKQKVSSWIYFSLILGVVLFVLD 118

Query: 380  ALWIDSSFGFGYGKAFIDYVSGISESHEIVMMALILIFAGVHSGMASLRDPGEKLIGPRA 559
              WID+S GFG  K FI  VS +SES E+VM  LILIFA VHSG+ASLRD GEKLIG RA
Sbjct: 119  VAWIDNSTGFG--KDFISAVSSLSESPEVVMFILILIFATVHSGLASLRDMGEKLIGERA 176

Query: 560  YRVLFAGISLPLAVSTVVYFINHRYDGVQLWQLQNVPWLHYLLWVSNFISFIFLYPSTFN 739
            +RVLFAG+SLPLAVSTVVYFINHRYDG+QLW+LQ+ P +H L+W+SNFISF+FLYPSTFN
Sbjct: 177  FRVLFAGVSLPLAVSTVVYFINHRYDGIQLWELQSAPAVHQLVWLSNFISFLFLYPSTFN 236

Query: 740  LLEVAAVDKPKMHLWETGIMRISRHPQMVGQVIWCLAHGIWIGNSVALTASLGLIGHHLF 919
            LLEVAAVDKPKMHLWETGIMRI+RHPQMVGQV+WCLAH +WIGNSV + ASLGLIGHHLF
Sbjct: 237  LLEVAAVDKPKMHLWETGIMRITRHPQMVGQVMWCLAHTVWIGNSVTVAASLGLIGHHLF 296

Query: 920  GVWNGDRRLALRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITGLTI 1099
            GVWNGDRRLA RYGEAFE VK RTS+VPFAAILDGRQKLPKDYY+ FLRLPYL+IT LT+
Sbjct: 297  GVWNGDRRLATRYGEAFEAVKKRTSIVPFAAILDGRQKLPKDYYRXFLRLPYLSITALTL 356

Query: 1100 GIYLAHPLMRAASLRLHW 1153
            G Y AHPLM+AAS RLHW
Sbjct: 357  GAYFAHPLMQAASFRLHW 374


>ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max]
          Length = 374

 Score =  491 bits (1264), Expect = e-136
 Identities = 250/376 (66%), Positives = 295/376 (78%), Gaps = 8/376 (2%)
 Frame = +2

Query: 50   MASSLLLSNPIFSLS----HRSNNIKFLAFHKQ-LKNPIFKTPS---NQILHHPFKSLQI 205
            MA+ +++S  +   S    HR  ++  L+++   + N   K  S   + +L    K+   
Sbjct: 1    MAAPVVVSTSVSVCSNYGYHRRPSLSALSYYSNSISNANLKLSSQCFSNLLRSNSKAPIY 60

Query: 206  FSKIRARTSVEETEGKNSVVLDEFQVGEDAATFNLFEQKISSWVYFTGILGVVLFALDAL 385
              K  ARTS+ E E ++    D   VGED+A F L +QKISSW+YFT ILGVVL  L+  
Sbjct: 61   CRKFVARTSIGENESESESEKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVA 120

Query: 386  WIDSSFGFGYGKAFIDYVSGISESHEIVMMALILIFAGVHSGMASLRDPGEKLIGPRAYR 565
            WID+S G  YGKAFID VS +S+SHE+VM+ LILIFAGVHSG+AS R+ GEKLIG R +R
Sbjct: 121  WIDNSTG--YGKAFIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFR 178

Query: 566  VLFAGISLPLAVSTVVYFINHRYDGVQLWQLQNVPWLHYLLWVSNFISFIFLYPSTFNLL 745
            V+FAGISLPLAVSTVVYFINHRYDG+QLW LQ+ P LH LLW+SNFISF FLYPSTFNLL
Sbjct: 179  VIFAGISLPLAVSTVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLL 238

Query: 746  EVAAVDKPKMHLWETGIMRISRHPQMVGQVIWCLAHGIWIGNSVALTASLGLIGHHLFGV 925
            EVAAVDKPK+HLWETGI+RI+RHPQMVGQVIWCLAH IWIGNSVA+ AS+GLI HHLFGV
Sbjct: 239  EVAAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGV 298

Query: 926  WNGDRRLALRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITGLTIGI 1105
            WNGDRRLA+RYGE FE+VKSRTSVVPFAAILDGRQKLPKD+YKEF+RLPYLT+T LT+G 
Sbjct: 299  WNGDRRLAIRYGEDFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGA 358

Query: 1106 YLAHPLMRAASLRLHW 1153
            Y AHPLM+ AS  LHW
Sbjct: 359  YFAHPLMQTASFNLHW 374


>ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycine max]
            gi|255639319|gb|ACU19957.1| unknown [Glycine max]
          Length = 369

 Score =  487 bits (1253), Expect = e-135
 Identities = 253/376 (67%), Positives = 299/376 (79%), Gaps = 8/376 (2%)
 Frame = +2

Query: 50   MASSLLLSNPI---FSLS-HRSNNIKFLAFHKQLKNPIFKTP---SNQILHHPFKSLQIF 208
            MA+S+++S  +   F+   HR  +I  L+ H    N I KT    S+Q   +      I+
Sbjct: 1    MAASVVVSTSLSVCFNYGYHRRPSISALSCHS---NSITKTNLKLSSQCFSNSNSVAPIY 57

Query: 209  S-KIRARTSVEETEGKNSVVLDEFQVGEDAATFNLFEQKISSWVYFTGILGVVLFALDAL 385
              K  ARTS+ E E ++   L    VGED+A F L +QK+SSW+YFT ILGVVL+ L+  
Sbjct: 58   CRKFVARTSIGENESESEKELGF--VGEDSAVFELGKQKVSSWIYFTAILGVVLYVLNVA 115

Query: 386  WIDSSFGFGYGKAFIDYVSGISESHEIVMMALILIFAGVHSGMASLRDPGEKLIGPRAYR 565
            WID+S G  YGKAFID VS +S+S E+VM+ LILIFAGVHSG+AS R+ GEKLIG R +R
Sbjct: 116  WIDNSTG--YGKAFIDAVSTLSDSSEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFR 173

Query: 566  VLFAGISLPLAVSTVVYFINHRYDGVQLWQLQNVPWLHYLLWVSNFISFIFLYPSTFNLL 745
            VLFAGISLPLAVSTVVYFINHRYDG+QLWQLQ+ P LH LLW+SNFISF FLYPSTFNLL
Sbjct: 174  VLFAGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQLLWLSNFISFFFLYPSTFNLL 233

Query: 746  EVAAVDKPKMHLWETGIMRISRHPQMVGQVIWCLAHGIWIGNSVALTASLGLIGHHLFGV 925
            EVAAVDKPK+HLWETGI+RI+RHPQMVGQVIWCLAH IWIGNSVA+ AS+GLI HHLFGV
Sbjct: 234  EVAAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGV 293

Query: 926  WNGDRRLALRYGEAFEVVKSRTSVVPFAAILDGRQKLPKDYYKEFLRLPYLTITGLTIGI 1105
            WNGDRRLA+RYGE FE+V+SRTSVVPFAAILDGRQ+LPKD+YKEF+RLPYLT+T +T+G 
Sbjct: 294  WNGDRRLAIRYGEDFELVRSRTSVVPFAAILDGRQELPKDFYKEFIRLPYLTVTVITLGA 353

Query: 1106 YLAHPLMRAASLRLHW 1153
            Y AHPLM+AAS  LHW
Sbjct: 354  YFAHPLMQAASFNLHW 369


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