BLASTX nr result

ID: Cimicifuga21_contig00014222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014222
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002514530.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|XP_002315977.1| predicted protein [Populus trichocarpa] gi|222865017|gb|EEF02148.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/116 (34%), Positives = 57/116 (49%), Gaps = 25/116 (21%)
 Frame = +1

Query: 4   GSFRGGEDPGFIDLKFGLSSESKPEDKDGESLS-------------------------FS 108
           G+F   +D GFIDLKF   SESK +    + +S                         F 
Sbjct: 282 GNFTTVDDSGFIDLKFDFPSESKADLSSVKMVSLSDSHSALGSLRGGDAVAQDQYGGHFG 341

Query: 109 YLRGDGMFSNGSSCRITVNNNEVKKCKRSYKVWKWIVKXXXXXXTAGRPSWKKDEE 276
            L GDG+FS+G SCRITV++  +K+ ++S+K W+WI +          PS KK +E
Sbjct: 342 SLVGDGLFSHGGSCRITVSDRGIKRSRKSFKSWRWIFRQ--------HPSAKKKDE 389


>ref|XP_002514530.1| conserved hypothetical protein [Ricinus communis]
           gi|223546134|gb|EEF47636.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/113 (38%), Positives = 60/113 (53%), Gaps = 22/113 (19%)
 Frame = +1

Query: 4   GSFRGGEDPGFIDLKFGL-SSESKPEDK------DGESLS-----FSYLRG--------- 120
           G+F   +D GFIDLKF   SS+SK E         G +LS     F  +RG         
Sbjct: 292 GNFTTIDDSGFIDLKFDFPSSDSKSELPYIVKMGGGGALSDSISAFGSMRGGDFLAQDHY 351

Query: 121 -DGMFSNGSSCRITVNNNEVKKCKRSYKVWKWIVKXXXXXXTAGRPSWKKDEE 276
            DG+FSNG SCRITV++  +K+ ++S+K W+WI +          P+ KK EE
Sbjct: 352 SDGLFSNGGSCRITVSDRGIKRSRKSFKSWRWIFR-------PNHPNAKKKEE 397


>ref|XP_002312350.1| predicted protein [Populus trichocarpa] gi|222852170|gb|EEE89717.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/97 (37%), Positives = 48/97 (49%), Gaps = 24/97 (24%)
 Frame = +1

Query: 4   GSFRGGEDPGFIDLKFGLSSESKPE--------DKDGESL----------------SFSY 111
           G+F   +D GFIDLKF    ESK +          D  S                  F  
Sbjct: 282 GNFTTVDDSGFIDLKFDFPPESKADLSAVKMVSSSDSNSAFGSMRGGDVVAQDQYGGFGS 341

Query: 112 LRGDGMFSNGSSCRITVNNNEVKKCKRSYKVWKWIVK 222
           L GDG  SNGSSCRITV++  +K+ ++S+K W+WI +
Sbjct: 342 LMGDGPCSNGSSCRITVSDRGIKRSRKSFKSWRWIFR 378


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