BLASTX nr result

ID: Cimicifuga21_contig00014220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014220
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24978.3| unnamed protein product [Vitis vinifera]              305   1e-80
ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing pro...   300   2e-79
emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]   285   1e-74
ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|2...   284   1e-74
ref|XP_004135950.1| PREDICTED: F-box/WD-40 repeat-containing pro...   277   2e-72

>emb|CBI24978.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  305 bits (780), Expect = 1e-80
 Identities = 154/234 (65%), Positives = 177/234 (75%)
 Frame = -2

Query: 704 QKKRSSIASIQSLDYDILSMIFVSLDHFDIARCSSVCKSWYDSIYTSDLLKTKYLGQKQN 525
           QK+ SS     SL +DIL MIFV LD FD+ RCS+VCKSW   I  S LL+  Y  Q+  
Sbjct: 13  QKRMSSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILYHKQQGG 72

Query: 524 SRLLFNASSSSGTSLKMYLKELAMEQHRTSLQDVSVNICQWNGHSARVDQCRMKMGLILT 345
           S    + S  S   LK+ +++LAME HR SLQ + ++I QW GHS R  QCRMKMGLILT
Sbjct: 73  SIGPSSTSHCSEKPLKVCIEQLAMEHHRLSLQGL-IDIEQWKGHSVRAGQCRMKMGLILT 131

Query: 344 GVGDKVVRIWSLEKYKCLEEYSVPNTVPLSDFDFDESKVVGLLGTRICIWRRHGKRSIFP 165
           GVGDK VR+WSLE YKCLEE+ +PN  PL DFDFDE+K+VGL+GTRIC WRR+GKRSIFP
Sbjct: 132 GVGDKAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKIVGLIGTRICTWRRNGKRSIFP 191

Query: 164 SREETITSGLCMRYIDPEAVVGCGDGTARVFDMYSEKCSRIIKMHAGPVSCLAL 3
           SRE T   GLCMRYIDPEAVVGC DGTARVFDMYS KCSRII+MH+GPV CLAL
Sbjct: 192 SREGTFMKGLCMRYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGPVRCLAL 245


>ref|XP_002271688.2| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Vitis vinifera]
          Length = 421

 Score =  300 bits (769), Expect = 2e-79
 Identities = 152/230 (66%), Positives = 174/230 (75%)
 Frame = -2

Query: 692 SSIASIQSLDYDILSMIFVSLDHFDIARCSSVCKSWYDSIYTSDLLKTKYLGQKQNSRLL 513
           SS     SL +DIL MIFV LD FD+ RCS+VCKSW   I  S LL+  Y  Q+  S   
Sbjct: 2   SSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILYHKQQGGSIGP 61

Query: 512 FNASSSSGTSLKMYLKELAMEQHRTSLQDVSVNICQWNGHSARVDQCRMKMGLILTGVGD 333
            + S  S   LK+ +++LAME HR SLQ + ++I QW GHS R  QCRMKMGLILTGVGD
Sbjct: 62  SSTSHCSEKPLKVCIEQLAMEHHRLSLQGL-IDIEQWKGHSVRAGQCRMKMGLILTGVGD 120

Query: 332 KVVRIWSLEKYKCLEEYSVPNTVPLSDFDFDESKVVGLLGTRICIWRRHGKRSIFPSREE 153
           K VR+WSLE YKCLEE+ +PN  PL DFDFDE+K+VGL+GTRIC WRR+GKRSIFPSRE 
Sbjct: 121 KAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKIVGLIGTRICTWRRNGKRSIFPSREG 180

Query: 152 TITSGLCMRYIDPEAVVGCGDGTARVFDMYSEKCSRIIKMHAGPVSCLAL 3
           T   GLCMRYIDPEAVVGC DGTARVFDMYS KCSRII+MH+GPV CLAL
Sbjct: 181 TFMKGLCMRYIDPEAVVGCEDGTARVFDMYSRKCSRIIRMHSGPVRCLAL 230


>emb|CAN61154.1| hypothetical protein VITISV_013775 [Vitis vinifera]
          Length = 471

 Score =  285 bits (728), Expect = 1e-74
 Identities = 153/269 (56%), Positives = 176/269 (65%), Gaps = 35/269 (13%)
 Frame = -2

Query: 704 QKKRSSIASIQSLDYDILSMIFVSLDHFDIARCSSVCKSWYDSIYTSDLLKTKYLGQKQN 525
           QK+ SS     SL +DIL MIFV LD FD+ RCS+VCKSW   I  S LL+  Y  Q+  
Sbjct: 13  QKRMSSRVPATSLAHDILCMIFVLLDLFDLVRCSAVCKSWNKVINKSKLLQILYHKQQGG 72

Query: 524 SRLLFNASSSSGTSLKMYLKELAMEQHRTSLQDVSVNICQWNGHSARVDQCRMKMGLILT 345
           S    + S  S   LK+ +++LAME HR SLQ + ++I QW GHS R  QCRMKMGLILT
Sbjct: 73  SIGPSSTSHCSEKPLKVCIEQLAMEHHRLSLQGL-IDIEQWKGHSVRAGQCRMKMGLILT 131

Query: 344 GVGDKVVRIWSLEKYKCLEEYSVPNTVPLSDFDFDESKVVGLLGTRICIWRRHGKRSIFP 165
           GVGDK VR+WSLE YKCLEE+ +PN  PL DFDFDE+K+VGL+GTRIC WRR+GKRSIFP
Sbjct: 132 GVGDKAVRLWSLESYKCLEEHFLPNLAPLVDFDFDENKIVGLIGTRICXWRRNGKRSIFP 191

Query: 164 SREETITSGLCMR-----------------------------------YIDPEAVVGCGD 90
           S E T   GLCMR                                   YIDPEAVVGC D
Sbjct: 192 SXEGTFMKGLCMRNAVVXSVSENGVWSLGEWEGHTVLGSCIEMVVVRCYIDPEAVVGCED 251

Query: 89  GTARVFDMYSEKCSRIIKMHAGPVSCLAL 3
           GTARVFDMYS KCSRII+MH+GPV CLAL
Sbjct: 252 GTARVFDMYSRKCSRIIRMHSGPVRCLAL 280


>ref|XP_002314059.1| predicted protein [Populus trichocarpa] gi|222850467|gb|EEE88014.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  284 bits (727), Expect = 1e-74
 Identities = 148/248 (59%), Positives = 179/248 (72%), Gaps = 15/248 (6%)
 Frame = -2

Query: 701 KKRSSIA--SIQSLDYDILSMIFVSLDHFDIARCSSVCKSWYDSIYTSDLLKTKYLGQKQ 528
           KKRSS    SI+SL++D L +IF  L  FD+ R S+VCK W + I  S LL+  YL Q++
Sbjct: 13  KKRSSTTPTSIRSLEHDALCIIFSYLGLFDVVRSSAVCKFWNEIIKRSKLLQLLYLKQQR 72

Query: 527 NSRLLFNASSSSGTSLKMYLKELAMEQHRTSLQDVSVNICQWNGHSARVDQCRMKMGLIL 348
            S    + S  S  SL +YL+ELA+E  R SL   S++I QW GHS  VDQCRMK GL+L
Sbjct: 73  RS----SRSDFSEESLNVYLEELAIEHQRQSLVQGSLHIDQWKGHSLGVDQCRMKRGLVL 128

Query: 347 TGVGDKVVRIWSLEKYKCLEEYSVPNTVPLSDFDFDESK-------------VVGLLGTR 207
           TGVGDKV+R+WSLE YKC+EEYS+P+ VPL DFDFDESK             +VGL+GTR
Sbjct: 129 TGVGDKVMRLWSLESYKCIEEYSIPDGVPLVDFDFDESKAVVPYIDIVHRIVIVGLVGTR 188

Query: 206 ICIWRRHGKRSIFPSREETITSGLCMRYIDPEAVVGCGDGTARVFDMYSEKCSRIIKMHA 27
           ICIWRR+G+RSIFPSRE     G CMRY DPEAVVGC DGTARVFDMYS+KCSRI++MH 
Sbjct: 189 ICIWRRNGQRSIFPSREGQFMKGSCMRYFDPEAVVGCEDGTARVFDMYSKKCSRIVRMHT 248

Query: 26  GPVSCLAL 3
            PV+CL+L
Sbjct: 249 EPVTCLSL 256


>ref|XP_004135950.1| PREDICTED: F-box/WD-40 repeat-containing protein At3g52030-like
           [Cucumis sativus] gi|449488809|ref|XP_004158178.1|
           PREDICTED: F-box/WD-40 repeat-containing protein
           At3g52030-like [Cucumis sativus]
          Length = 433

 Score =  277 bits (708), Expect = 2e-72
 Identities = 137/241 (56%), Positives = 173/241 (71%), Gaps = 5/241 (2%)
 Frame = -2

Query: 710 SLQKKRSSIAS--IQSLDYDILSMIFVSLDHFDIARCSSVCKSWYDSIYTSDLLKT---K 546
           S  ++RS + +  + SL +DIL +IF  LD FD+ RC  VCKSW  +IY S++L+T   +
Sbjct: 10  SSARRRSDVDAKPVHSLSHDILCIIFSFLDLFDLVRCLGVCKSWNYAIYKSEILRTFCLR 69

Query: 545 YLGQKQNSRLLFNASSSSGTSLKMYLKELAMEQHRTSLQDVSVNICQWNGHSARVDQCRM 366
           Y  Q+ NS      S S    L   L+E+AME+H+ +L+   + + QW GHS RV+QCRM
Sbjct: 70  YQKQEMNSASTSEVSFSLEKPLLECLEEIAMERHKLALEKGRIRVSQWIGHSVRVEQCRM 129

Query: 365 KMGLILTGVGDKVVRIWSLEKYKCLEEYSVPNTVPLSDFDFDESKVVGLLGTRICIWRRH 186
           KMGLILTGVGDKV+R+WS E ++CLEEYSVP  +PL DFDFD  K+VGL+G ++CIW R 
Sbjct: 130 KMGLILTGVGDKVMRLWSPENFRCLEEYSVPEKMPLVDFDFDVGKIVGLIGRQLCIWSRS 189

Query: 185 GKRSIFPSREETITSGLCMRYIDPEAVVGCGDGTARVFDMYSEKCSRIIKMHAGPVSCLA 6
           GKRSIFPSRE T   GLCMRY D EAVVGC DGTA VFDMYS +CSRII+M  GPV+CL 
Sbjct: 190 GKRSIFPSRECTFEKGLCMRYFDAEAVVGCEDGTAHVFDMYSRRCSRIIRMLPGPVTCLC 249

Query: 5   L 3
           +
Sbjct: 250 V 250


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