BLASTX nr result
ID: Cimicifuga21_contig00014214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00014214 (336 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002516804.1| conserved hypothetical protein [Ricinus comm... 58 9e-07 ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23... 57 2e-06 gb|ACU22680.1| unknown [Glycine max] 57 2e-06 ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23... 56 3e-06 >ref|XP_002516804.1| conserved hypothetical protein [Ricinus communis] gi|223543892|gb|EEF45418.1| conserved hypothetical protein [Ricinus communis] Length = 316 Score = 57.8 bits (138), Expect = 9e-07 Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 7/113 (6%) Frame = +3 Query: 9 IGELGGLLCVVSGRTGQDIWIWVMKDYGVAESWIIQFRIGYSRISGS--FAYMEPLGLTS 182 +G L G LCV+ WVMK+YGV ESWI + Y GS Y P + Sbjct: 207 LGVLDGCLCVMCNYHAVRADFWVMKEYGVRESWIRLVTVPYLDYPGSLHLQYSVPYAIAD 266 Query: 183 NGEIIVQKIGSELILYLP-----KTNIILNLKKFERAFLEPFSYIGSLVSPRV 326 NGE++++ S L++Y P K +I N ++++ YI SLVSP+V Sbjct: 267 NGEVLLE-FKSSLVIYNPNYGTFKYPVINN----SCSWVDAEVYIDSLVSPKV 314 >ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 393 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 9 IGELGGLLCVVSGRTGQDIWIWVMKDYGVAESWIIQFRIGYSRISGSFAYMEPLGLTSNG 188 +G L LCV+S + +W+MKDYG ESW FR+ Y IS S+ Y + L ++ + Sbjct: 289 LGVLRDCLCVLS-HADTFLDVWLMKDYGNKESWTKLFRVPYMGISDSYLYTKALCISEDD 347 Query: 189 EIIVQKIGSELILYLPK--TNIILNLKKFERAFLEPFSYIGSLVSPRV 326 +++++ SEL +Y + T+ I +++ ++ P YI SL+SP V Sbjct: 348 QVLME-FNSELAVYNSRNGTSKIPDIQDI-YMYMTPEVYIESLISPCV 393 >gb|ACU22680.1| unknown [Glycine max] Length = 393 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 2/108 (1%) Frame = +3 Query: 9 IGELGGLLCVVSGRTGQDIWIWVMKDYGVAESWIIQFRIGYSRISGSFAYMEPLGLTSNG 188 +G L LCV+S + +W+MKDYG ESW FR+ Y IS S+ Y + L ++ + Sbjct: 289 LGVLRDCLCVLS-HADTFLDVWLMKDYGNKESWTKLFRVPYMGISDSYLYTKALCISEDD 347 Query: 189 EIIVQKIGSELILYLPK--TNIILNLKKFERAFLEPFSYIGSLVSPRV 326 +++++ SEL +Y + T+ I +++ ++ P YI SL+SP V Sbjct: 348 QVLME-FNSELAVYNSRNGTSKIPDIQDI-YMYMTPEVYIESLISPCV 393 >ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1| predicted protein [Populus trichocarpa] Length = 477 Score = 56.6 bits (135), Expect = 2e-06 Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Frame = +3 Query: 9 IGELGGLLCVVSGRTGQDIWIWVMKDYGVAESWIIQF--RIGYSRISGSFAYMEPLGLTS 182 +G LGG L G IWVMK YGV ESW +F + + I + P+ L S Sbjct: 281 LGVLGGCLYFFDYPLGDSFDIWVMKQYGVQESWTKEFILKNPSTDIIWYWDLYRPISLLS 340 Query: 183 NGEIIVQKIGSELILYLPKTNIILNLKKFERAFLEPFSYIGSLVSPRVI 329 NGEI++ ++ Y P+ LK + E Y+ S +SPR I Sbjct: 341 NGEILMSHKSKAMVSYNPEDRSFRFLKIYGIQNFEANPYVPSFLSPREI 389 >ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max] Length = 405 Score = 56.2 bits (134), Expect = 3e-06 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 1/105 (0%) Frame = +3 Query: 9 IGELGGLLCVVSGRTGQDIWIWVMKDYGVAESWIIQFRIGYSRISGSFAYMEPLGLTSNG 188 +G L G LC+ +W+MKDYG ESW+ I Y +F+Y P ++ NG Sbjct: 299 LGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENG 358 Query: 189 EIIVQKIGSELILYLPKTNIILNLK-KFERAFLEPFSYIGSLVSP 320 E+++ +LILY P+ N K + + + + Y+ +LVSP Sbjct: 359 EVLLM-FEFDLILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 402