BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014186
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
emb|CBI32643.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containi...    69   3e-10
ref|XP_003624377.1| Pentatricopeptide repeat-containing protein ...    69   3e-10

>ref|XP_002323442.1| predicted protein [Populus trichocarpa] gi|222868072|gb|EEF05203.1|
           predicted protein [Populus trichocarpa]
          Length = 526

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 65/170 (38%), Positives = 82/170 (48%), Gaps = 30/170 (17%)
 Frame = -2

Query: 421 AIHHFSTLSKLRK----------STKGNVEALRILDLITPKSPKALVSHSHLRLIQACMQ 272
           A H F TLS+ R            TK   +ALRILD+ITPK+       +HLR+IQ   Q
Sbjct: 17  ATHLFQTLSQHRPFSSHKFRRTTQTKRLDKALRILDIITPKTTAPTNGQNHLRVIQDFFQ 76

Query: 271 -------------DLVPPAPNQGIHQSTPTVFDEIPERNVCWGSLFFQMHKQGTKT---- 143
                        D + P  + G      +VFDEI E      S F    +    T    
Sbjct: 77  AHSNRTSEQRLSNDFISPNSDNGDF----SVFDEILE------SSFINNDEDSNATSLSF 126

Query: 142 EATTLSCALSSI---RCLQRGVQLHCLAIKTGFDAYVYIGSSLISLYGKC 2
           +A+ LS A+SS    R L+ G+Q HCLAI  GF A  YIGSSL++ YGKC
Sbjct: 127 DASVLSNAVSSCASTRDLRGGIQYHCLAISAGFIANAYIGSSLVTFYGKC 176


>ref|XP_002273989.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Vitis vinifera]
          Length = 510

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
 Frame = -2

Query: 448 NSAISKPFPAIHHFSTLSKLRKSTKGNVEALRILDLITPKSPKALVSHSHLRLIQACMQD 269
           +S IS PF + +  S    +++ TK + + L IL+L++P +  A    +HLRLIQ    D
Sbjct: 15  SSPISVPFSS-YGSSFSQNIKRKTKTHKQ-LGILNLVSPTTDCAENRQTHLRLIQ----D 68

Query: 268 LVPPAPNQGIHQSTPTVF---DEIPERNVCWGSLFFQMHKQGTKTEATTLSCALS---SI 107
            +P   NQ   +     F   + + E +    + F  ++++ +  +A+ LS ALS   S 
Sbjct: 69  FLPIPTNQFAQKRASDDFAHSNSLEETSNMLETNF--LNEEESIVDASALSHALSLCASS 126

Query: 106 RCLQRGVQLHCLAIKTGFDAYVYIGSSLISLYGKC 2
           R L+ GVQ HCLAI+TGF   VY+GS LIS Y KC
Sbjct: 127 RSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKC 161


>emb|CBI32643.3| unnamed protein product [Vitis vinifera]
          Length = 1400

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 57/155 (36%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
 Frame = -2

Query: 448  NSAISKPFPAIHHFSTLSKLRKSTKGNVEALRILDLITPKSPKALVSHSHLRLIQACMQD 269
            +S IS PF + +  S    +++ TK + + L IL+L++P +  A    +HLRLIQ    D
Sbjct: 876  SSPISVPFSS-YGSSFSQNIKRKTKTHKQ-LGILNLVSPTTDCAENRQTHLRLIQ----D 929

Query: 268  LVPPAPNQGIHQSTPTVF---DEIPERNVCWGSLFFQMHKQGTKTEATTLSCALS---SI 107
             +P   NQ   +     F   + + E +    + F  ++++ +  +A+ LS ALS   S 
Sbjct: 930  FLPIPTNQFAQKRASDDFAHSNSLEETSNMLETNF--LNEEESIVDASALSHALSLCASS 987

Query: 106  RCLQRGVQLHCLAIKTGFDAYVYIGSSLISLYGKC 2
            R L+ GVQ HCLAI+TGF   VY+GS LIS Y KC
Sbjct: 988  RSLKSGVQFHCLAIRTGFVGNVYVGSCLISFYSKC 1022


>ref|XP_004142220.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Cucumis sativus]
           gi|449502632|ref|XP_004161699.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g37320-like [Cucumis sativus]
          Length = 524

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 51/153 (33%), Positives = 75/153 (49%), Gaps = 12/153 (7%)
 Frame = -2

Query: 424 PAIHHFSTLSKLRKSTKGNVEALRILDLITPKSPKALVSH-SHLRLIQ--------ACMQ 272
           P+I  FS        T    +  R+LDLI+PK   +  S  +HLRLIQ         C  
Sbjct: 27  PSIRFFSNFKSNTHPTTNLPKPPRLLDLISPKGDVSYESRQTHLRLIQDFLQTDSGQCRS 86

Query: 271 DLVPPAPNQ---GIHQSTPTVFDEIPERNVCWGSLFFQMHKQGTKTEATTLSCALSSIRC 101
             +P   +    G+ + +  V D+  E    W    F    +    + +++    +S R 
Sbjct: 87  QTLPVGCDSRSIGLSKDSSFVLDQECESGH-WDVQSFAGRFKFNANDISSVLSLCNSQRN 145

Query: 100 LQRGVQLHCLAIKTGFDAYVYIGSSLISLYGKC 2
           L+ G+Q H +AI+TGF A VY+GSSL+SLYGKC
Sbjct: 146 LRGGIQYHSVAIRTGFIANVYVGSSLVSLYGKC 178


>ref|XP_003624377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499392|gb|AES80595.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 487

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 61/165 (36%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
 Frame = -2

Query: 481 ARMVYILFHTCNSAISKPFPAIHHFSTLSKLRKSTKGNVEALRILDLITPKSPKALVSH- 305
           AR +   FH  N  I +PF     F  L   + + K    ALRIL L++PK     + + 
Sbjct: 9   ARNMLPTFHHKNQ-IFRPFS----FYRLGP-KNTNKDLTNALRILKLVSPKKTVTDIENR 62

Query: 304 -SHLRLIQACMQDLVPPAPNQGIHQSTPTVFDEIPERNVCWGSLFFQMHKQGTKTEATTL 128
            SHLRL++    D++       +  +  TV + I E +V       +M +QG   +   L
Sbjct: 63  RSHLRLVE----DILENTTTNPLGSNLKTVTETILESSV------LEM-EQGLGIDVCFL 111

Query: 127 SCALS---SIRCLQRGVQLHCLAIKTGFDAYVYIGSSLISLYGKC 2
           S ALS   S R    G+Q HCLAI+ GF A VY+GSSLISLY +C
Sbjct: 112 SHALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRC 156