BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014180
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   127   5e-27
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...   121   4e-25
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...   120   5e-25
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   119   2e-24
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...   115   3e-23

>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  127 bits (319), Expect = 5e-27
 Identities = 86/297 (28%), Positives = 155/297 (52%), Gaps = 28/297 (9%)
 Frame = +2

Query: 110 RMYCLEGDTFDQTVQIETPVDLEFKQ--VLGSCNGLVCLAS-RNFVCLLNPCTREYKVVK 280
           R+Y L+ ++ D+  +++ P+     +  VLGSCNGL+C+ +  + +   NP  R+++++ 
Sbjct: 60  RLYELDLNSMDRVKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIP 119

Query: 281 FD----KEFS-------FYGRNVYGLAFDEANDDYLLVQIFFEGKFIDIDSDVKFESEVN 427
            +    KE +           +VYG  +D A DDY LV I +   F+D+ +   F+S V 
Sbjct: 120 SEPLIRKETNENNTITTLLAAHVYGFGYDSATDDYKLVSISY---FVDLHNR-SFDSHVK 175

Query: 428 IYSLNDSSCSTISKVPYRVWSGQGCGIYLNGCIHWVA----ETKRVLTIISFDNREKMFR 595
           IY++      T+  +PY +   +  G++++G +HWV     E +    I++FD R ++FR
Sbjct: 176 IYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFR 235

Query: 596 EMQLPGNLDSGANMTLGVLGGKICILCDIYDCDFELWVMTNYGVADSWTKLCSMEKNLLQ 775
           E+ LPG +D   +M + +L G +CI+ +     F++WVM  YG  DSW K+ ++ +    
Sbjct: 236 EVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKMFTVGQ---- 291

Query: 776 RAPFSKVLCFFDNDKLLMKNGKEL--------VVYDPKRKKL--WDLSYRRINWERI 916
                        D  LMK+ K L        V+++   KKL  ++L+ + ++W RI
Sbjct: 292 -----------PRDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYNLASKDVSWVRI 337


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score =  121 bits (303), Expect = 4e-25
 Identities = 78/282 (27%), Positives = 145/282 (51%), Gaps = 23/282 (8%)
 Frame = +2

Query: 101 LDMRMYCLEGDTFDQTVQIETPVDLEFKQV--LGSCNGLVCLAS-RNFVCLLNPCTREYK 271
           +D  +Y     T D  V +  P+      +  LGSCNGL+C+++  + +   NP  R+++
Sbjct: 62  VDSDLYQTNFPTLDPPVSLNHPLMCYSNSITLLGSCNGLLCISNVADDIAFWNPSLRQHR 121

Query: 272 VVKF-------DKEFSFYGRNVYGLAFDEANDDYLLVQIFFEGKFIDIDSDVKFESEVNI 430
           ++ +         + + +   V G  FD    DY LV+I +   F+D+  D  F+S+V +
Sbjct: 122 ILPYLPVPRRRHPDTTLFAARVCGFGFDHKTRDYKLVRISY---FVDLH-DRSFDSQVKL 177

Query: 431 YSLNDSSCSTISKVPYRVWSGQGCGIYLNGCIHWVAETK----RVLTIISFDNREKMFRE 598
           Y+L  ++  T+  +PY +   +  G+++   +HWV   K    +   II+FD    +FRE
Sbjct: 178 YTLRANAWKTLPSLPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIIAFDLTHDIFRE 237

Query: 599 MQLP--GNLDSGANMTLGVLGGKICILCDIYDCDFELWVMTNYGVADSWTKLCSMEKNLL 772
           + LP  G +D G  + L +LGG +C+  + +    ++WVM  Y   DSW K+ ++E++  
Sbjct: 238 LPLPDTGGVDGGFEIDLALLGGSLCMTVNFHKTRIDVWVMREYNRRDSWCKVFTLEESRE 297

Query: 773 QRAPFSKVLCF------FDNDKLLMKNG-KELVVYDPKRKKL 877
            R+    + C        D +K+L+++  K L  YD ++K++
Sbjct: 298 MRS----LKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEV 335


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score =  120 bits (301), Expect(2) = 5e-25
 Identities = 84/322 (26%), Positives = 157/322 (48%), Gaps = 17/322 (5%)
 Frame = +2

Query: 2   NFIKMHLNRSIEGDRVNLFLASEPYPSMRSRFLLDMRMYCLEGDTFDQTVQIETPVDLEF 181
           +F  +HL+RS+        L S     +R    LD  +Y     T D  + +  P+    
Sbjct: 40  HFNSVHLSRSLS-------LTSNTTLILR----LDSDLYQTNFPTLDPPLFLNHPLMCYS 88

Query: 182 KQV--LGSCNGLVCLAS-RNFVCLLNPCTREYKVV--------KFDKEFSFYGRNVYGLA 328
             +  LGSCNGL+C+++  + +   NP  R+++++        +   + + +   VYG  
Sbjct: 89  NNITLLGSCNGLLCISNVADDIAFWNPSLRQHRILPSLPLPRRRLHPDTTLFAARVYGFG 148

Query: 329 FDEANDDYLLVQIFFEGKFIDIDSDVKFESEVNIYSLNDSSCSTISKVPYRVWSGQGCGI 508
           FD  + DY LV+I +   F+D+  D  F+S+V +Y+L  ++  T+  +PY +   +  G+
Sbjct: 149 FDHTSPDYKLVRISY---FVDLQ-DRSFDSQVKLYTLRANAWKTLPSMPYALCCARTMGV 204

Query: 509 YLNGCIHWVAETK----RVLTIISFDNREKMFREMQLP--GNLDSGANMTLGVLGGKICI 670
           ++   +HWV   K    +   I++FD   ++F E+ LP  G +  G  + + +LG  +C+
Sbjct: 205 FVGNSLHWVVTRKLEPDQPDLIVAFDLTHEIFTELPLPDTGGVGGGFEIDVALLGDSLCM 264

Query: 671 LCDIYDCDFELWVMTNYGVADSWTKLCSMEKNLLQRAPFSKVLCFFDNDKLLMKNGKELV 850
             + ++   ++WVM  Y   DSW KL ++E++   R+        + +D       K L+
Sbjct: 265 TVNFHNSKMDVWVMREYNRGDSWCKLFTLEESRELRSFKCLRPLGYSSD-----GNKVLL 319

Query: 851 VYDPKRKKLWDLSYRRINWERI 916
            +D KR   +DL  + +   RI
Sbjct: 320 EHDRKRLCWYDLGKKEVTLVRI 341



 Score = 21.2 bits (43), Expect(2) = 5e-25
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +3

Query: 1023 GCERRRTDF 1049
            GC+RRR DF
Sbjct: 375  GCQRRRDDF 383


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 389

 Score =  119 bits (297), Expect = 2e-24
 Identities = 107/360 (29%), Positives = 170/360 (47%), Gaps = 22/360 (6%)
 Frame = +2

Query: 5    FIKMHLNRSIEGDRVNLFLASEPYPSMRSRFLLDMRMYCLEGDTFDQTVQIETPVDL--E 178
            FI +HLN SIE             P   S  L    +Y L  D  D    ++ P+     
Sbjct: 40   FIYLHLNHSIES------------PCNLSIILKSSELYSLSFDLLDNIQPLDHPLMCYNH 87

Query: 179  FKQVLGSCNGLVCLASR-NFVCLLNPCTREYKVVKF--DKEFSFYGR-----NVYGLAFD 334
              ++LGSCNGL+C+ +  + + L NP  R ++VV +   +   ++G      +V+G  +D
Sbjct: 88   GVKILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYD 147

Query: 335  EANDDYLLVQIFFEGKFIDIDSDVKFESEVNIYSLNDSSCSTISKVPYRVWSGQGCGIYL 514
             +NDDY LV+I    +F  +D    FESEV ++SL  +S   I+ +PY V      GIY 
Sbjct: 148  LSNDDYKLVRI---AQFGGVDRK-SFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYA 203

Query: 515  NGCIHWVA----ETKRVLTIISFDNREKMFREMQLPGNLDSGANMTLGVLGGKICILCDI 682
            NG +HW+     ++    TI++ D   + +  +  P  +D   NM +GVL G + +L   
Sbjct: 204  NGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNCNMGVGVLQGCLSLLAYA 263

Query: 683  YDCDFELWVMTNYGVADSWTKLCSMEK-------NLLQRAPFSKVLCFFDNDKLLMKNGK 841
                 ++WVM  Y V +SW+KL S+ +         L+   +SK      N+ L+  +  
Sbjct: 264  RSERVDVWVMEEYMVKESWSKLFSVARLEVIGILRSLKPLAYSK----SGNEVLIEHDNV 319

Query: 842  ELVVYDPKRKKLWDLSYRRINWERIDHKVIHVASLLPLKSGTYAGAVAGV-KPSKKRKKR 1018
             L  YD KRK++ ++  + +         I V SL+PL +           K +K RKKR
Sbjct: 320  NLFWYDLKRKEVVNVWIQGV--PITFEAEICVGSLVPLNANRLRRRPKHEHKETKNRKKR 377


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
            gi|223527542|gb|EEF29664.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 395

 Score =  115 bits (287), Expect = 3e-23
 Identities = 103/352 (29%), Positives = 159/352 (45%), Gaps = 31/352 (8%)
 Frame = +2

Query: 2    NFIKMHLNRSIEGDRVNLFLASEPYPSMRSRFLLDMRMYCLEGDTFDQTVQIETPVDLEF 181
            +FI  HL+ S++  R NLFL            L D  +Y L+ D+          V +  
Sbjct: 39   DFIDHHLSHSLK-TRSNLFL-----------ILRDWNLYTLDFDSLSSVSPAAADVLIHP 86

Query: 182  KQ------VLGSCNGLVCLA-SRNFVCLLNPCTREYKVVKFDK-----EFSFYGRNVYGL 325
             Q       +GSCNGL+ L  S   + L NP TR+YK V   +       S  G   YG 
Sbjct: 87   LQKGGGTEAVGSCNGLLALRNSERDLALYNPATRKYKRVPVSEIEPPDRNSKTGYVFYGF 146

Query: 326  AFDEANDDYLLVQIFFEGKFIDIDSDVKFESEVNIYSLNDSSCSTISKVPY--------- 478
             FD  ++DY L+++       D      +E +V +YSL + S   I  +PY         
Sbjct: 147  GFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRIKGLPYYLRFLYKPF 206

Query: 479  -RVWSGQGCGIYLNGCIHWVAETKRVL----TIISFDNREKMFREMQLPGNLDSGANMTL 643
             +V   +G G++    +HWV      L    +II+FD   + F+++  P   D+  N  +
Sbjct: 207  FQVLHRRGYGVFACNALHWVMPHWPELGVNNSIIAFDIVNETFQQVPQPNWSDNQLNFQV 266

Query: 644  --GVLGGKICILCDIYDCDFELWVMTNYGVADSWTKLCSME-KNLLQRAPFSKVLCFF-D 811
              GVL G++C +C+      +LWVM  YGV +SW KL S      +    F + LC+  D
Sbjct: 267  DAGVLEGRLCAMCNCGHECIDLWVMEEYGVKESWIKLFSFRLSKSMSNLMFLRPLCYSKD 326

Query: 812  NDKLLMK-NGKELVVYDPKRKKLWDLSYRRINWERIDHKVIHVASLLPLKSG 964
             +K+L++ N  +LV YD  +  +  +  +     R     + V SL+PL  G
Sbjct: 327  REKMLLEVNDHKLVWYDWNKTSVRTVKVK--GGPRSFGAAMCVGSLVPLDDG 376