BLASTX nr result

ID: Cimicifuga21_contig00014177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014177
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltran...   134   2e-29
ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltran...   132   7e-29
ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltran...   130   3e-28
ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltran...   129   4e-28
emb|CBI39767.3| unnamed protein product [Vitis vinifera]              129   4e-28

>ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Cucumis sativus] gi|449484971|ref|XP_004157033.1|
           PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
           methyltransferase NOP2-like [Cucumis sativus]
          Length = 611

 Score =  134 bits (337), Expect = 2e-29
 Identities = 65/100 (65%), Positives = 84/100 (84%)
 Frame = -3

Query: 301 SDSSDGDIERKSKLLDKKLAEQLVLAGDELESNIKGESDEFLLPTEQELEEEVVRPPDIS 122
           SDS + DIE KS+++D+K A +   A DE++ NIK ESDEF LPT++ELEEE +RPPD+S
Sbjct: 99  SDSDETDIEDKSRIIDEKRAREEKDAADEMQLNIKDESDEFRLPTKEELEEESLRPPDLS 158

Query: 121 NLQRRVKEIVRVLSNFQKLRPEGASRKDYIEQLKKDLASY 2
           +LQRR++EIVRVLSNF+ LR EGA+RKDY+EQLKKD+ SY
Sbjct: 159 SLQRRIREIVRVLSNFKALRQEGATRKDYVEQLKKDIGSY 198


>ref|XP_003530809.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Glycine max]
          Length = 614

 Score =  132 bits (331), Expect = 7e-29
 Identities = 63/101 (62%), Positives = 84/101 (83%)
 Frame = -3

Query: 304 DSDSSDGDIERKSKLLDKKLAEQLVLAGDELESNIKGESDEFLLPTEQELEEEVVRPPDI 125
           DSDS DGDIE+KS+ +D++ A++   A  E++ NI  ESDEF LPT++EL+EE +RPPD+
Sbjct: 92  DSDSDDGDIEKKSRAIDEEKAKEEEDADAEMQLNINQESDEFRLPTKEELDEEALRPPDL 151

Query: 124 SNLQRRVKEIVRVLSNFQKLRPEGASRKDYIEQLKKDLASY 2
           SNLQRR KEIVRVLSNF+ LR +G++RK+Y+EQLKKDL +Y
Sbjct: 152 SNLQRRTKEIVRVLSNFKALRQDGSTRKEYVEQLKKDLCTY 192


>ref|XP_003552992.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Glycine max]
          Length = 610

 Score =  130 bits (326), Expect = 3e-28
 Identities = 62/101 (61%), Positives = 83/101 (82%)
 Frame = -3

Query: 304 DSDSSDGDIERKSKLLDKKLAEQLVLAGDELESNIKGESDEFLLPTEQELEEEVVRPPDI 125
           DSDS D DIE+KS+ +D++ A +   A  E++ NI  ESDEF LPT++ELE+E +RPPD+
Sbjct: 86  DSDSDDDDIEKKSRAIDEEKAREEEDADAEMQLNINQESDEFRLPTKEELEDEALRPPDL 145

Query: 124 SNLQRRVKEIVRVLSNFQKLRPEGASRKDYIEQLKKDLASY 2
           SNLQRR+KEIVRVLSNF+ LR +G++RK+Y+EQLKKDL +Y
Sbjct: 146 SNLQRRIKEIVRVLSNFKALRQDGSTRKEYVEQLKKDLCTY 186


>ref|XP_002266863.2| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Vitis vinifera]
          Length = 633

 Score =  129 bits (325), Expect = 4e-28
 Identities = 63/101 (62%), Positives = 80/101 (79%)
 Frame = -3

Query: 304 DSDSSDGDIERKSKLLDKKLAEQLVLAGDELESNIKGESDEFLLPTEQELEEEVVRPPDI 125
           DSDS + DIE+KS+ +D++ A +   AG E++ NIK ESDEF LPT++EL+EE  +PPD+
Sbjct: 105 DSDSDESDIEKKSRAIDEERAREEEEAGAEMQLNIKEESDEFRLPTKEELQEEARQPPDL 164

Query: 124 SNLQRRVKEIVRVLSNFQKLRPEGASRKDYIEQLKKDLASY 2
            NLQRR+KEIVRVLSNF  LR EGA RKDY+EQL+ DL SY
Sbjct: 165 PNLQRRIKEIVRVLSNFNSLRQEGAQRKDYVEQLRVDLGSY 205


>emb|CBI39767.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score =  129 bits (325), Expect = 4e-28
 Identities = 63/101 (62%), Positives = 80/101 (79%)
 Frame = -3

Query: 304 DSDSSDGDIERKSKLLDKKLAEQLVLAGDELESNIKGESDEFLLPTEQELEEEVVRPPDI 125
           DSDS + DIE+KS+ +D++ A +   AG E++ NIK ESDEF LPT++EL+EE  +PPD+
Sbjct: 105 DSDSDESDIEKKSRAIDEERAREEEEAGAEMQLNIKEESDEFRLPTKEELQEEARQPPDL 164

Query: 124 SNLQRRVKEIVRVLSNFQKLRPEGASRKDYIEQLKKDLASY 2
            NLQRR+KEIVRVLSNF  LR EGA RKDY+EQL+ DL SY
Sbjct: 165 PNLQRRIKEIVRVLSNFNSLRQEGAQRKDYVEQLRVDLGSY 205


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