BLASTX nr result

ID: Cimicifuga21_contig00014160 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014160
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283335.1| PREDICTED: GPN-loop GTPase 2-like [Vitis vin...   553   e-155
ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]   549   e-154
emb|CAN72850.1| hypothetical protein VITISV_013941 [Vitis vinifera]   546   e-153
ref|XP_003527737.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]   545   e-153
ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|2...   538   e-151

>ref|XP_002283335.1| PREDICTED: GPN-loop GTPase 2-like [Vitis vinifera]
          Length = 320

 Score =  553 bits (1426), Expect = e-155
 Identities = 268/299 (89%), Positives = 287/299 (95%)
 Frame = -3

Query: 1010 MVFGQVVVGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 831
            M +GQVV+GPPGSGKTTYC+GMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS
Sbjct: 1    MAYGQVVIGPPGSGKTTYCDGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 60

Query: 830  DAMVEHSLGPNGGLIYCMDYLEKNIDWLESKLEPLIKDHYLLFDFPGQVELFTLHSNAKN 651
            D M EHSLGPNGGL+YCMDYLEKNIDWL+SKLEPL+KDHYLLFDFPGQVELF LHSNAK 
Sbjct: 61   DVMAEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLVKDHYLLFDFPGQVELFFLHSNAKK 120

Query: 650  VVMKLIKKLDLRLTAVLLIDSHLCSDPGKYVSALILSLSIMLHLELPHINVLSKIDLIES 471
            V+MKLIKKLDLRLTAV L+D+HLCSDPGKYVSAL+LSLS MLHLELPHINVLSKIDLIES
Sbjct: 121  VIMKLIKKLDLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 470  YGKLAFNLDYYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIDDFGLVNFTTLDIQDK 291
            YGKLAFNLD+YTDVQDLS+L YHLDQDPRS+KYRKLTKELC+VI+D+ LVNFTTLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSFLHYHLDQDPRSSKYRKLTKELCEVIEDYSLVNFTTLDIQDK 240

Query: 290  ESVGNLVKLIDKSNGYIFAGIEGSAVELSKIAAGPLDWDYYRVAAVQEKYMQDDIDFDK 114
            ESVGNLVKLIDKSNGYIFAGIEGSAVE SKIAAGPLDWDYYRVAAVQEKYM+D+ +F K
Sbjct: 241  ESVGNLVKLIDKSNGYIFAGIEGSAVEFSKIAAGPLDWDYYRVAAVQEKYMKDEENFIK 299


>ref|XP_003523622.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]
          Length = 301

 Score =  549 bits (1414), Expect = e-154
 Identities = 265/301 (88%), Positives = 288/301 (95%)
 Frame = -3

Query: 1010 MVFGQVVVGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 831
            MVFGQVVVGPPGSGKTTYCNGMSQFL LIGRKVAVINLDPAND+LPYECAVNIEDL+KLS
Sbjct: 1    MVFGQVVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYECAVNIEDLVKLS 60

Query: 830  DAMVEHSLGPNGGLIYCMDYLEKNIDWLESKLEPLIKDHYLLFDFPGQVELFTLHSNAKN 651
            D MVEHSLGPNGGL+YCMDYLEKNIDWLE+KLEPL+KDHYLLFDFPGQVELF LHS+AKN
Sbjct: 61   DVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKN 120

Query: 650  VVMKLIKKLDLRLTAVLLIDSHLCSDPGKYVSALILSLSIMLHLELPHINVLSKIDLIES 471
            V++KLIKKL+LRLTAV LID+HLCSDPGKY+SALILSLS MLHLELPHINVLSKIDLIES
Sbjct: 121  VILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALILSLSTMLHLELPHINVLSKIDLIES 180

Query: 470  YGKLAFNLDYYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIDDFGLVNFTTLDIQDK 291
            YGKLAFNLD+YTDVQDLSYLQ+HLDQDPRSAKYRKLTKELCD+I++F LV+F+TLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSYLQHHLDQDPRSAKYRKLTKELCDIIENFSLVSFSTLDIQDK 240

Query: 290  ESVGNLVKLIDKSNGYIFAGIEGSAVELSKIAAGPLDWDYYRVAAVQEKYMQDDIDFDKN 111
            ESVGNLVKLIDKSNGYIF G+E SAVE SKIA GP++WDYYRVAAVQEKYM+DD + D N
Sbjct: 241  ESVGNLVKLIDKSNGYIFVGMEASAVEFSKIAVGPVNWDYYRVAAVQEKYMKDDENIDDN 300

Query: 110  E 108
            E
Sbjct: 301  E 301


>emb|CAN72850.1| hypothetical protein VITISV_013941 [Vitis vinifera]
          Length = 320

 Score =  546 bits (1408), Expect = e-153
 Identities = 267/302 (88%), Positives = 286/302 (94%), Gaps = 5/302 (1%)
 Frame = -3

Query: 1010 MVFGQVVVGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 831
            M +GQVV+GPPGSGKTTYC+GMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS
Sbjct: 1    MAYGQVVIGPPGSGKTTYCDGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 60

Query: 830  DAMVEHSLGPNGGLIYCMDYLEKNIDWLESKLEPLIKDHYLLFDFPGQVELFTLHSNAKN 651
            D M EHSLGPNGGL+YCMDYLEKNIDWL+SKLEPL+KDHYLLFDFPGQVELF LHSNAK 
Sbjct: 61   DVMAEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLVKDHYLLFDFPGQVELFFLHSNAKK 120

Query: 650  VVMKLIKKLDLRLTAVLLIDSHLCSDPGKYVSALILSLSIMLHLELPHINVLSKIDLIES 471
            V+MKLIKKLDLRLTAV L+D+HLCSDPGKYVSAL+LSLS MLHLELPHINVLSKIDLIES
Sbjct: 121  VIMKLIKKLDLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 470  YGKLAFNLDYYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIDDFGLVNFTTLDIQDK 291
            YGKLAFNLD+YTDVQDLS+L YHLDQDPRS+KYRKLTKELC+VI+D+ LVNFTTLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSFLHYHLDQDPRSSKYRKLTKELCEVIEDYSLVNFTTLDIQDK 240

Query: 290  ESVGNLVKLIDKSNGYIFAGIEGSAVELSKIAAGPLDWDYYR-----VAAVQEKYMQDDI 126
            ESVGNLVKLIDKSNGYIFAGIEGSAVE SKIAAGPLDWDYYR     VAAVQEKYM+D+ 
Sbjct: 241  ESVGNLVKLIDKSNGYIFAGIEGSAVEFSKIAAGPLDWDYYRYPFLMVAAVQEKYMKDEE 300

Query: 125  DF 120
            +F
Sbjct: 301  NF 302


>ref|XP_003527737.1| PREDICTED: GPN-loop GTPase 2-like [Glycine max]
          Length = 297

 Score =  545 bits (1403), Expect = e-153
 Identities = 262/294 (89%), Positives = 284/294 (96%)
 Frame = -3

Query: 1010 MVFGQVVVGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 831
            MVFGQ+VVGPPGSGKTTYCNGMSQFL LIGRKVAVINLDPAND+LPY+CAVNIEDL+KLS
Sbjct: 1    MVFGQIVVGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDSLPYDCAVNIEDLVKLS 60

Query: 830  DAMVEHSLGPNGGLIYCMDYLEKNIDWLESKLEPLIKDHYLLFDFPGQVELFTLHSNAKN 651
            D MVEHSLGPNGGL+YCMDYLEKNIDWLE+KLEPL+KDHYLLFDFPGQVELF LHS+AKN
Sbjct: 61   DVMVEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSSAKN 120

Query: 650  VVMKLIKKLDLRLTAVLLIDSHLCSDPGKYVSALILSLSIMLHLELPHINVLSKIDLIES 471
            V++KLIKKL+LRLTAV LID+HLCSDPGKY+SAL+LSLS MLHLELPHINVLSKIDLIES
Sbjct: 121  VILKLIKKLNLRLTAVHLIDAHLCSDPGKYISALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 470  YGKLAFNLDYYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIDDFGLVNFTTLDIQDK 291
            YGKLAFNLD+YTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVI++F LV+F+TLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIENFSLVSFSTLDIQDK 240

Query: 290  ESVGNLVKLIDKSNGYIFAGIEGSAVELSKIAAGPLDWDYYRVAAVQEKYMQDD 129
            ESVGNLVKLIDKSNGYIF G+E SAVE SKIA GP+DWDYYRVAAVQEKYM+DD
Sbjct: 241  ESVGNLVKLIDKSNGYIFVGMETSAVEFSKIAVGPVDWDYYRVAAVQEKYMKDD 294


>ref|XP_002320027.1| predicted protein [Populus trichocarpa] gi|222860800|gb|EEE98342.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  538 bits (1386), Expect = e-151
 Identities = 261/297 (87%), Positives = 280/297 (94%)
 Frame = -3

Query: 1010 MVFGQVVVGPPGSGKTTYCNGMSQFLKLIGRKVAVINLDPANDALPYECAVNIEDLIKLS 831
            M FGQVV+GPPGSGKTTYCNGMSQFL LIGRKVAVINLDPANDALPY+CAVNIEDLIKLS
Sbjct: 1    MAFGQVVIGPPGSGKTTYCNGMSQFLSLIGRKVAVINLDPANDALPYDCAVNIEDLIKLS 60

Query: 830  DAMVEHSLGPNGGLIYCMDYLEKNIDWLESKLEPLIKDHYLLFDFPGQVELFTLHSNAKN 651
            D M EHSLGPNGGL+YCMDYLEKNIDWL+SKLEPL+KDHYLLFDFPGQVELF LHSNAKN
Sbjct: 61   DVMNEHSLGPNGGLVYCMDYLEKNIDWLQSKLEPLLKDHYLLFDFPGQVELFFLHSNAKN 120

Query: 650  VVMKLIKKLDLRLTAVLLIDSHLCSDPGKYVSALILSLSIMLHLELPHINVLSKIDLIES 471
            V+MKLIKKL LRLTAV L+D+HLCSDPGKYVSAL+LSLS MLHLELPHINVLSKIDLIES
Sbjct: 121  VIMKLIKKLSLRLTAVHLVDAHLCSDPGKYVSALLLSLSTMLHLELPHINVLSKIDLIES 180

Query: 470  YGKLAFNLDYYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCDVIDDFGLVNFTTLDIQDK 291
            YGKLAFNLD+YTDVQDLSYLQ  LDQDPR+AKYRKLTKELCDV+ DF LV+FTTLDIQDK
Sbjct: 181  YGKLAFNLDFYTDVQDLSYLQDQLDQDPRAAKYRKLTKELCDVVQDFSLVDFTTLDIQDK 240

Query: 290  ESVGNLVKLIDKSNGYIFAGIEGSAVELSKIAAGPLDWDYYRVAAVQEKYMQDDIDF 120
            ESVGNLVKLID++NGYIFAG+E SAVE SKIA  P+DWDYYRVAAVQEKYM+DD +F
Sbjct: 241  ESVGNLVKLIDRTNGYIFAGVESSAVEFSKIAVRPVDWDYYRVAAVQEKYMKDDENF 297


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