BLASTX nr result

ID: Cimicifuga21_contig00014158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014158
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266769.1| PREDICTED: UPF0551 protein C8orf38 homolog, ...   400   e-109
emb|CAN63693.1| hypothetical protein VITISV_026816 [Vitis vinifera]   398   e-108
ref|XP_002329864.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
ref|XP_002509578.1| protein with unknown function [Ricinus commu...   391   e-106
ref|XP_004147937.1| PREDICTED: NADH dehydrogenase (ubiquinone) c...   390   e-106

>ref|XP_002266769.1| PREDICTED: UPF0551 protein C8orf38 homolog, mitochondrial-like [Vitis
            vinifera]
          Length = 303

 Score =  400 bits (1027), Expect = e-109
 Identities = 204/303 (67%), Positives = 235/303 (77%)
 Frame = -1

Query: 1035 MNGASTSSSIRAAFSYCVQQVRSXXXXXXXXXXXXXHDMRKAAFALRAFNVETAKAMDVA 856
            M GAS SS+I+AAFSYCVQQVR+              +M KAAFA+RAFNVETA+AMD+A
Sbjct: 1    MKGASASSTIQAAFSYCVQQVRNYDYHHYLCNIELPPNMWKAAFAIRAFNVETARAMDIA 60

Query: 855  SDPRIGLMRLLWWQEAIDKIYAHKVIEHPIAQALSPVVFDHKINKSWLKRSVEARINDAR 676
            SDPR+GLMRLLWWQEAIDKI+A+K IEHP AQAL+ VV +HKI+K W+KRSVEARINDAR
Sbjct: 61   SDPRVGLMRLLWWQEAIDKIFANKTIEHPTAQALASVVSEHKISKGWMKRSVEARINDAR 120

Query: 675  REDDDIPETIEELERYAEDTMSTILYTTLQAGGIRSTAADHAASHIGKASGXXXXLRSLP 496
            RE  D+PETIEELERYAEDT+ST+LYTTLQAGGIRSTAADHAASHIGKASG    LRSLP
Sbjct: 121  REVTDMPETIEELERYAEDTVSTLLYTTLQAGGIRSTAADHAASHIGKASGLLLLLRSLP 180

Query: 495  YHASRNRQIPYIPAELAAKHGLLVEKDERKQIRMDSREGLTEAVFEMASVANVHLQKARE 316
            YHA+RNRQ PYIP +LAA H LL  +  R +IRMDS EGL + VF+MASVAN HL+KAR+
Sbjct: 181  YHANRNRQFPYIPKDLAANHNLLDTQGGRSEIRMDSPEGLCDVVFDMASVANAHLEKARQ 240

Query: 315  XXXXXXXXXXXXXXXXXXXXXXLDSLRRVQFDVFDPRLAKGILGISPTWFQLKLRWRAWR 136
                                  LDSL RVQF+VFDPR+A+GILGI P WFQLKL+W +WR
Sbjct: 241  LAGTVPAEALPVLLPAVPAQVILDSLSRVQFNVFDPRMARGILGIPPLWFQLKLKWHSWR 300

Query: 135  RQY 127
             +Y
Sbjct: 301  GKY 303


>emb|CAN63693.1| hypothetical protein VITISV_026816 [Vitis vinifera]
          Length = 303

 Score =  398 bits (1023), Expect = e-108
 Identities = 204/303 (67%), Positives = 235/303 (77%)
 Frame = -1

Query: 1035 MNGASTSSSIRAAFSYCVQQVRSXXXXXXXXXXXXXHDMRKAAFALRAFNVETAKAMDVA 856
            M GAS SS+I+AAFSYCVQQVR+              +MRKAAFA+RAFNVETA+AMD+A
Sbjct: 1    MKGASASSTIQAAFSYCVQQVRNYDYHHYLCNIELPPNMRKAAFAIRAFNVETARAMDIA 60

Query: 855  SDPRIGLMRLLWWQEAIDKIYAHKVIEHPIAQALSPVVFDHKINKSWLKRSVEARINDAR 676
            SDPR+GLMRLLWWQEAIDKI+A+K IEHP AQAL+ VV +HKI+K W+KRSVEARINDAR
Sbjct: 61   SDPRVGLMRLLWWQEAIDKIFANKTIEHPTAQALASVVSEHKISKGWMKRSVEARINDAR 120

Query: 675  REDDDIPETIEELERYAEDTMSTILYTTLQAGGIRSTAADHAASHIGKASGXXXXLRSLP 496
            RE  D+PETIEELERYAEDT+ST+LYTTLQAGGIRSTAADHAASHIGKASG    LRSLP
Sbjct: 121  REVTDMPETIEELERYAEDTVSTLLYTTLQAGGIRSTAADHAASHIGKASGLLLLLRSLP 180

Query: 495  YHASRNRQIPYIPAELAAKHGLLVEKDERKQIRMDSREGLTEAVFEMASVANVHLQKARE 316
            YHA+RNRQ PYIP +LAA H LL  +  R +IRMDS EGL + VF+MASVAN HL+KAR+
Sbjct: 181  YHANRNRQFPYIPKDLAANHNLLDTQGGRSEIRMDSPEGLCDVVFDMASVANAHLEKARQ 240

Query: 315  XXXXXXXXXXXXXXXXXXXXXXLDSLRRVQFDVFDPRLAKGILGISPTWFQLKLRWRAWR 136
                                  LDSL RVQF+VFDPR+A+GILGI P  FQLKL+W +WR
Sbjct: 241  LAGTVPAEALPVLLPAVPAQVILDSLSRVQFNVFDPRMARGILGIPPLXFQLKLKWHSWR 300

Query: 135  RQY 127
             +Y
Sbjct: 301  GKY 303


>ref|XP_002329864.1| predicted protein [Populus trichocarpa] gi|222871101|gb|EEF08232.1|
            predicted protein [Populus trichocarpa]
          Length = 301

 Score =  392 bits (1008), Expect = e-107
 Identities = 207/303 (68%), Positives = 234/303 (77%)
 Frame = -1

Query: 1035 MNGASTSSSIRAAFSYCVQQVRSXXXXXXXXXXXXXHDMRKAAFALRAFNVETAKAMDVA 856
            MNGAS  SS+R AFSYCVQQVR+              ++RKAAFALRAFNVETA+AMDVA
Sbjct: 1    MNGAS--SSLRTAFSYCVQQVRNYDYHHYLCLLELPPNIRKAAFALRAFNVETARAMDVA 58

Query: 855  SDPRIGLMRLLWWQEAIDKIYAHKVIEHPIAQALSPVVFDHKINKSWLKRSVEARINDAR 676
            SDPRIGLMRLLWWQEAIDKIYA+KVIEHP AQALS V+ +++I+K WLKR VEARINDAR
Sbjct: 59   SDPRIGLMRLLWWQEAIDKIYANKVIEHPAAQALSSVISENRISKGWLKRPVEARINDAR 118

Query: 675  REDDDIPETIEELERYAEDTMSTILYTTLQAGGIRSTAADHAASHIGKASGXXXXLRSLP 496
            RE  DIPETIEELE+YAEDT+ST+LY TLQAGGIRSTAADHAASH GKASG    LRSLP
Sbjct: 119  REVTDIPETIEELEKYAEDTISTLLYMTLQAGGIRSTAADHAASHAGKASGLLLLLRSLP 178

Query: 495  YHASRNRQIPYIPAELAAKHGLLVEKDERKQIRMDSREGLTEAVFEMASVANVHLQKARE 316
            YHASRNR   YIP E+AAKHGLLV++  R +IR+DSRE L  AVF+MASVANVHLQKAR 
Sbjct: 179  YHASRNRHFCYIPTEVAAKHGLLVKEGGRFEIRLDSRESLCNAVFDMASVANVHLQKARS 238

Query: 315  XXXXXXXXXXXXXXXXXXXXXXLDSLRRVQFDVFDPRLAKGILGISPTWFQLKLRWRAWR 136
                                  LD+L RV FDVFDPRLA+G+LGISP  +QLKL+W +WR
Sbjct: 239  LAGTVPTEARSVLLPAVPAQVFLDTLSRVHFDVFDPRLARGVLGISPVSYQLKLKWSSWR 298

Query: 135  RQY 127
             +Y
Sbjct: 299  GKY 301


>ref|XP_002509578.1| protein with unknown function [Ricinus communis]
            gi|223549477|gb|EEF50965.1| protein with unknown function
            [Ricinus communis]
          Length = 351

 Score =  391 bits (1005), Expect = e-106
 Identities = 207/304 (68%), Positives = 232/304 (76%)
 Frame = -1

Query: 1038 LMNGASTSSSIRAAFSYCVQQVRSXXXXXXXXXXXXXHDMRKAAFALRAFNVETAKAMDV 859
            LM G S  SS+RAAFS+CV+QVRS               MRKAAFALRAFNVETA+AMDV
Sbjct: 50   LMKGVS--SSLRAAFSHCVEQVRSYDYHHYLCLLELPPHMRKAAFALRAFNVETARAMDV 107

Query: 858  ASDPRIGLMRLLWWQEAIDKIYAHKVIEHPIAQALSPVVFDHKINKSWLKRSVEARINDA 679
            ASDPRIGLMRLLWWQE IDKIYA+K+IEHP AQALS  + ++KI K WLKRSVEARINDA
Sbjct: 108  ASDPRIGLMRLLWWQETIDKIYANKLIEHPTAQALSSAISEYKITKGWLKRSVEARINDA 167

Query: 678  RREDDDIPETIEELERYAEDTMSTILYTTLQAGGIRSTAADHAASHIGKASGXXXXLRSL 499
            RRE  DIPETIEELE+YAEDT+STILY TLQAGGIRSTAADHAASH+GKASG    LRSL
Sbjct: 168  RREVTDIPETIEELEKYAEDTVSTILYMTLQAGGIRSTAADHAASHVGKASGLLLLLRSL 227

Query: 498  PYHASRNRQIPYIPAELAAKHGLLVEKDERKQIRMDSREGLTEAVFEMASVANVHLQKAR 319
            PYHASRNR   YIP+E+AAKHGLLV++  R +IR+DSREGL + VFE+ASVANVHLQKAR
Sbjct: 228  PYHASRNRHFSYIPSEVAAKHGLLVKERGRPEIRIDSREGLCDTVFEIASVANVHLQKAR 287

Query: 318  EXXXXXXXXXXXXXXXXXXXXXXLDSLRRVQFDVFDPRLAKGILGISPTWFQLKLRWRAW 139
                                   LDSL  VQFDVFDPRL +GILGI P  +QLKL+W +W
Sbjct: 288  ALAGTVPVEARPVLLPAVPAQVLLDSLSEVQFDVFDPRLERGILGIPPLLYQLKLKWSSW 347

Query: 138  RRQY 127
            R +Y
Sbjct: 348  RGRY 351


>ref|XP_004147937.1| PREDICTED: NADH dehydrogenase (ubiquinone) complex I, assembly factor
            6-like [Cucumis sativus] gi|449494336|ref|XP_004159517.1|
            PREDICTED: NADH dehydrogenase (ubiquinone) complex I,
            assembly factor 6-like [Cucumis sativus]
          Length = 303

 Score =  390 bits (1001), Expect = e-106
 Identities = 199/303 (65%), Positives = 231/303 (76%)
 Frame = -1

Query: 1035 MNGASTSSSIRAAFSYCVQQVRSXXXXXXXXXXXXXHDMRKAAFALRAFNVETAKAMDVA 856
            MNG   SSS+RAAFS+CVQQVRS               MRKAAFALRAFNVET++AMDVA
Sbjct: 1    MNGTFASSSLRAAFSHCVQQVRSYDYHHYLCLLELPPSMRKAAFALRAFNVETSRAMDVA 60

Query: 855  SDPRIGLMRLLWWQEAIDKIYAHKVIEHPIAQALSPVVFDHKINKSWLKRSVEARINDAR 676
            +DPRIGLMRL+WWQEAIDKIYA K IEHPIAQALS V+ ++KI+K WLKRSVEARINDAR
Sbjct: 61   TDPRIGLMRLVWWQEAIDKIYASKKIEHPIAQALSSVISENKISKLWLKRSVEARINDAR 120

Query: 675  REDDDIPETIEELERYAEDTMSTILYTTLQAGGIRSTAADHAASHIGKASGXXXXLRSLP 496
            RED DIP  I+ELE+YAEDT ST+LY TLQAGGIRSTAADHAASHIGKASG    L+SLP
Sbjct: 121  REDTDIPTAIDELEKYAEDTASTLLYMTLQAGGIRSTAADHAASHIGKASGLLLLLKSLP 180

Query: 495  YHASRNRQIPYIPAELAAKHGLLVEKDERKQIRMDSREGLTEAVFEMASVANVHLQKARE 316
            YHA+RNR   YIP ++A  HGLL ++  R +IR+DSRE L +AVFEMASVAN HLQKAR+
Sbjct: 181  YHATRNRHFSYIPVKVAENHGLLAKEGVRFEIRLDSRESLCDAVFEMASVANAHLQKARD 240

Query: 315  XXXXXXXXXXXXXXXXXXXXXXLDSLRRVQFDVFDPRLAKGILGISPTWFQLKLRWRAWR 136
                                  LDSLR+VQFDVFD RL +G+LG+SP WFQ++L+W +WR
Sbjct: 241  LAGTVPREALPVLLQAVPAQVLLDSLRKVQFDVFDSRLQRGVLGVSPLWFQMRLKWSSWR 300

Query: 135  RQY 127
             +Y
Sbjct: 301  GKY 303


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