BLASTX nr result

ID: Cimicifuga21_contig00014156 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014156
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|2...   210   2e-52
ref|XP_004145565.1| PREDICTED: splicing factor U2af small subuni...   209   3e-52
ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, pu...   209   3e-52
ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...   209   4e-52
ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arab...   205   6e-51

>ref|XP_002300614.1| predicted protein [Populus trichocarpa] gi|222842340|gb|EEE79887.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  210 bits (534), Expect = 2e-52
 Identities = 97/116 (83%), Positives = 104/116 (89%)
 Frame = +3

Query: 3   IDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVLFKEEDXXXXXXXX 182
           +DP KIQEHFE+FYEDI+EEL+KFGEIESLN+CDNLADHM+GNVYVLFKEED        
Sbjct: 69  LDPHKIQEHFEEFYEDIFEELNKFGEIESLNVCDNLADHMIGNVYVLFKEEDQAAAALQA 128

Query: 183 XKGRFYSGRSIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDLRRKL 350
            +GRFYSGR IIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDLRRKL
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKL 184


>ref|XP_004145565.1| PREDICTED: splicing factor U2af small subunit B-like [Cucumis
           sativus] gi|449485076|ref|XP_004157064.1| PREDICTED:
           splicing factor U2af small subunit B-like [Cucumis
           sativus]
          Length = 276

 Score =  209 bits (533), Expect = 3e-52
 Identities = 97/116 (83%), Positives = 103/116 (88%)
 Frame = +3

Query: 3   IDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVLFKEEDXXXXXXXX 182
           IDPRKIQEHFEDFYEDIYEEL KFGEIESLN+CDNLADHM+GNVYV F+EED        
Sbjct: 69  IDPRKIQEHFEDFYEDIYEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQA 128

Query: 183 XKGRFYSGRSIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDLRRKL 350
            +GRFYSGR IIADFSPVTDFREATCRQ+EENNCNRGGYCNFMHVK IG+DLRRKL
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENNCNRGGYCNFMHVKMIGKDLRRKL 184


>ref|XP_002510741.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus
           communis] gi|223551442|gb|EEF52928.1| U2 snrnp auxiliary
           factor, small subunit, putative [Ricinus communis]
          Length = 272

 Score =  209 bits (533), Expect = 3e-52
 Identities = 98/116 (84%), Positives = 103/116 (88%)
 Frame = +3

Query: 3   IDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVLFKEEDXXXXXXXX 182
           IDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYV F+EED        
Sbjct: 69  IDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFREEDQAAAALQA 128

Query: 183 XKGRFYSGRSIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDLRRKL 350
            +GRFYSGR IIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDLRRKL
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKL 184


>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score =  209 bits (532), Expect = 4e-52
 Identities = 98/116 (84%), Positives = 103/116 (88%)
 Frame = +3

Query: 3   IDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVLFKEEDXXXXXXXX 182
           IDPRKIQEHFEDFYEDI+EEL KFGEIESLN+CDNLADHM+GNVYV FKEE+        
Sbjct: 69  IDPRKIQEHFEDFYEDIFEELGKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQA 128

Query: 183 XKGRFYSGRSIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDLRRKL 350
            +GRFYSGR IIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVK IGRDLRRKL
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKLIGRDLRRKL 184


>ref|XP_002863733.1| hypothetical protein ARALYDRAFT_494737 [Arabidopsis lyrata subsp.
           lyrata] gi|297309568|gb|EFH39992.1| hypothetical protein
           ARALYDRAFT_494737 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  205 bits (522), Expect = 6e-51
 Identities = 93/116 (80%), Positives = 104/116 (89%)
 Frame = +3

Query: 3   IDPRKIQEHFEDFYEDIYEELHKFGEIESLNICDNLADHMVGNVYVLFKEEDXXXXXXXX 182
           +DP KIQ+HFEDFYEDI+EEL+KFGE+ESLN+CDNLADHM+GNVYVLFKEED        
Sbjct: 69  LDPSKIQDHFEDFYEDIFEELNKFGEVESLNVCDNLADHMIGNVYVLFKEEDHAAAALQA 128

Query: 183 XKGRFYSGRSIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKQIGRDLRRKL 350
            +GRFYSGR IIADFSPVTDFREATCRQ+EEN+CNRGGYCNFMHVKQI R+LRRKL
Sbjct: 129 LQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKQISRELRRKL 184


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