BLASTX nr result

ID: Cimicifuga21_contig00014146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014146
         (1226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516134.1| conserved hypothetical protein [Ricinus comm...   257   5e-66
dbj|BAK61873.1| F-box / LRR-repeat protein [Citrus unshiu]            251   2e-64
emb|CBI20722.3| unnamed protein product [Vitis vinifera]              245   1e-62
ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_004141343.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-re...   238   2e-60

>ref|XP_002516134.1| conserved hypothetical protein [Ricinus communis]
            gi|223544620|gb|EEF46136.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 997

 Score =  257 bits (656), Expect = 5e-66
 Identities = 134/193 (69%), Positives = 151/193 (78%), Gaps = 5/193 (2%)
 Frame = -3

Query: 1224 LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGTSGCQHSE-----SSSDMPSLEDALER 1060
            LCQSAIEELLA CTHLTH+SLNGCVNMHDLNWG SG QHSE     +SS +   E+  E 
Sbjct: 802  LCQSAIEELLAYCTHLTHLSLNGCVNMHDLNWGCSGGQHSELPSVCNSSALLCDENIDEP 861

Query: 1059 NEQPNRLLQNLNCVGCPNIKKVVIPAVARCVHLSTLNLSLSAYLKEVDIAXXXXXXXXXX 880
             EQ NRLLQNLNCVGCPNI+KV+IP +ARC HLS+LNLSLSA LKEVDIA          
Sbjct: 862  IEQANRLLQNLNCVGCPNIRKVLIPPMARCFHLSSLNLSLSANLKEVDIACFSLCILNLS 921

Query: 879  XXXXLEILKLDCPKLTSLFLQSCSIAEEALEVAVSHCSILETLDVRYCPKIYPVSMGRLR 700
                LEILKL+CP+LTSLFLQSC+I EE +E A+S CS+LETLDVR+CPKIY +SMGRLR
Sbjct: 922  NCCSLEILKLECPRLTSLFLQSCNIDEEDVEAAISRCSMLETLDVRFCPKIYSISMGRLR 981

Query: 699  AVSPGLKRIFSSL 661
            A  P LKR+FSSL
Sbjct: 982  ASCPSLKRVFSSL 994


>dbj|BAK61873.1| F-box / LRR-repeat protein [Citrus unshiu]
          Length = 1068

 Score =  251 bits (642), Expect = 2e-64
 Identities = 133/196 (67%), Positives = 145/196 (73%), Gaps = 5/196 (2%)
 Frame = -3

Query: 1224 LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGTSGCQHSESSSDMPSL-----EDALER 1060
            LCQSAIEELLA CTHLTHVSLNGC NMHDLNWG+SGCQ  ES S   S      E+  E 
Sbjct: 873  LCQSAIEELLAYCTHLTHVSLNGCGNMHDLNWGSSGCQPFESPSVYNSCGIFPHENIHES 932

Query: 1059 NEQPNRLLQNLNCVGCPNIKKVVIPAVARCVHLSTLNLSLSAYLKEVDIAXXXXXXXXXX 880
             +QPNRLLQNLNCVGCPNI+KV IP  ARC HLS+LNLSLSA LKEVD+A          
Sbjct: 933  IDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHLSSLNLSLSANLKEVDVACFNLCFLNLS 992

Query: 879  XXXXLEILKLDCPKLTSLFLQSCSIAEEALEVAVSHCSILETLDVRYCPKIYPVSMGRLR 700
                LE LKLDCPKLTSLFLQSC+I EE +E A++ C +LETLDVR+CPKI   SMGRLR
Sbjct: 993  NCCSLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGRLR 1052

Query: 699  AVSPGLKRIFSSLPIS 652
            A  P LKRIFSSL  S
Sbjct: 1053 AACPSLKRIFSSLTTS 1068


>emb|CBI20722.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score =  245 bits (626), Expect = 1e-62
 Identities = 128/193 (66%), Positives = 146/193 (75%), Gaps = 5/193 (2%)
 Frame = -3

Query: 1224 LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGTSGCQHSE-----SSSDMPSLEDALER 1060
            LCQSAIEELLACCTHLTHVSLNGC+NMHDLNWG S    SE     ++S + S  D  E 
Sbjct: 765  LCQSAIEELLACCTHLTHVSLNGCLNMHDLNWGFSSGPISELPSIYNTSSLSSHGDDHEL 824

Query: 1059 NEQPNRLLQNLNCVGCPNIKKVVIPAVARCVHLSTLNLSLSAYLKEVDIAXXXXXXXXXX 880
             EQPNRLLQNLNCVGC NIKKV+IP +ARC HLS+LNLSLSA LKEVD+A          
Sbjct: 825  IEQPNRLLQNLNCVGCQNIKKVLIPPMARCTHLSSLNLSLSANLKEVDVACYNLCFLNLS 884

Query: 879  XXXXLEILKLDCPKLTSLFLQSCSIAEEALEVAVSHCSILETLDVRYCPKIYPVSMGRLR 700
                LEILKL+CP+LTSLFLQSC+I  EA+E A+S C++LETLD+R+CPK+   SM  LR
Sbjct: 885  NCSSLEILKLECPRLTSLFLQSCNITVEAVEAAISQCNMLETLDIRFCPKLSNASMKTLR 944

Query: 699  AVSPGLKRIFSSL 661
            AV P LKRIFSSL
Sbjct: 945  AVCPSLKRIFSSL 957


>ref|XP_002324196.1| predicted protein [Populus trichocarpa] gi|222865630|gb|EEF02761.1|
            predicted protein [Populus trichocarpa]
          Length = 957

 Score =  244 bits (623), Expect = 3e-62
 Identities = 127/193 (65%), Positives = 145/193 (75%), Gaps = 5/193 (2%)
 Frame = -3

Query: 1224 LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGTSGCQHSE-----SSSDMPSLEDALER 1060
            LCQSAIEELLACC HLTH+SLNGC NMHDLNWG SG Q  E     SS+ + S E+    
Sbjct: 765  LCQSAIEELLACCRHLTHLSLNGCANMHDLNWGCSGGQIYEFPSKFSSAALFSDENLPVS 824

Query: 1059 NEQPNRLLQNLNCVGCPNIKKVVIPAVARCVHLSTLNLSLSAYLKEVDIAXXXXXXXXXX 880
             EQPNRLLQNLNCVGCPNI+KV IP VARC+ LS+LNLSLS+ LKEVD+           
Sbjct: 825  TEQPNRLLQNLNCVGCPNIRKVAIPPVARCLLLSSLNLSLSSNLKEVDVVCFNLCYLNLS 884

Query: 879  XXXXLEILKLDCPKLTSLFLQSCSIAEEALEVAVSHCSILETLDVRYCPKIYPVSMGRLR 700
                LEILKL+CP+LTSLFLQSC+I EE +E A+S C +LETLDVR+CPKI  +SMG+LR
Sbjct: 885  NCCSLEILKLECPRLTSLFLQSCNIDEETVEAAISQCGMLETLDVRFCPKICSISMGQLR 944

Query: 699  AVSPGLKRIFSSL 661
            A  P LKRIFSSL
Sbjct: 945  AACPSLKRIFSSL 957


>ref|XP_004141343.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein 15-like
            [Cucumis sativus]
          Length = 1042

 Score =  238 bits (608), Expect = 2e-60
 Identities = 124/192 (64%), Positives = 143/192 (74%), Gaps = 4/192 (2%)
 Frame = -3

Query: 1224 LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGTSGCQHSESSSDMP----SLEDALERN 1057
            LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWG S  Q S S   +P    + ++  E  
Sbjct: 848  LCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGCSIGQLSLSGIPIPLGQATFDEIEEPI 907

Query: 1056 EQPNRLLQNLNCVGCPNIKKVVIPAVARCVHLSTLNLSLSAYLKEVDIAXXXXXXXXXXX 877
             QPNRLLQNLNCVGC NI+KV+IP  ARC HLS+LNLSLS+ LKEVD++           
Sbjct: 908  AQPNRLLQNLNCVGCQNIRKVLIPPAARCFHLSSLNLSLSSNLKEVDVSCYNLCVLNLSN 967

Query: 876  XXXLEILKLDCPKLTSLFLQSCSIAEEALEVAVSHCSILETLDVRYCPKIYPVSMGRLRA 697
               LE+LKLDCP+LT+LFLQSC+I EE +  AVS CS+LETLDVR+CPKI  +SM +LR 
Sbjct: 968  CCSLEVLKLDCPRLTNLFLQSCNIEEEVVVAAVSKCSMLETLDVRFCPKISSISMVQLRI 1027

Query: 696  VSPGLKRIFSSL 661
              P LKRIFSSL
Sbjct: 1028 ACPSLKRIFSSL 1039


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