BLASTX nr result

ID: Cimicifuga21_contig00014123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014123
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556148.1| PREDICTED: uncharacterized protein LOC100814...    67   5e-09
ref|XP_003536433.1| PREDICTED: eukaryotic translation initiation...    65   3e-08
ref|XP_004154455.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    64   7e-08
ref|XP_004139637.1| PREDICTED: uncharacterized protein LOC101204...    64   7e-08
ref|XP_003592124.1| Eukaryotic translation initiation factor 5B ...    62   3e-07

>ref|XP_003556148.1| PREDICTED: uncharacterized protein LOC100814875 [Glycine max]
          Length = 1355

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 59/195 (30%), Positives = 85/195 (43%), Gaps = 6/195 (3%)
 Frame = +1

Query: 64  MGRKKPTTVDE-NPVAPSQGGKSKKKSRAIDDDEYMIGSEALEDQLQQNQEEVAVAXXXX 240
           MG+KKPT  DE N V    GGKSKKK+  IDDDEY IG+E  E+    ++E+  VA    
Sbjct: 1   MGKKKPTARDEENAVQQGGGGKSKKKAVLIDDDEYSIGTELSEEPAPASEEKPVVA---G 57

Query: 241 XXXXXXXXAQSKDNDEEIALEEXXXXXXXXXXFTXXXXXXXXXXXXXLFSASNFDVL-DG 417
                   A++K ND+++  +E                          F+AS FD+L D 
Sbjct: 58  KKKGKKGNAKAKSNDDDVDEDEDDPEIVFAG---KKKGKNKKGGGSSAFTASGFDLLGDE 114

Query: 418 EDNEKGKXXXXXXXXXXXXXXPIVXXXXXXXXXXXXXXNGVFTGSAFDAILD----EGEV 585
            D+++ K              P+V                +F+ SAFDAI D    +G V
Sbjct: 115 RDDDEEKSGLTGEVDGEEEDEPVV-SFTGKKKASKKEGGSLFSASAFDAIDDGEEEDGPV 173

Query: 586 IDVEDTEEKTIGEDK 630
           I  +  ++ + G  K
Sbjct: 174 ISFKGKKKSSKGSKK 188


>ref|XP_003536433.1| PREDICTED: eukaryotic translation initiation factor 5B-like
           [Glycine max]
          Length = 1344

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
 Frame = +1

Query: 64  MGRKKPTTVDE-NPVAPSQGGKSKKKSRAIDDDEYMIGSEALEDQLQQNQEEVAVAXXXX 240
           MG+KKPT  DE N      GGKSKKK+  IDDDEY +G+E  E+Q   ++E+ A A    
Sbjct: 1   MGKKKPTARDEENASQQGGGGKSKKKAVVIDDDEYSVGTELSEEQAPASEEKPAAA---G 57

Query: 241 XXXXXXXXAQSKDNDEEIALEEXXXXXXXXXXFTXXXXXXXXXXXXXLFSASNFDVL-DG 417
                   A++K+ND+++  +E                          F+AS FD+L D 
Sbjct: 58  KKKGKKGNAKAKNNDDDVDEDEDVSGIVFAG---KKKGKNKKGGGSSAFTASGFDLLGDE 114

Query: 418 EDNEKGKXXXXXXXXXXXXXXPIVXXXXXXXXXXXXXXNGVFTGSAFDAILDEGEVIDVE 597
           ED+++ K              P+V                +F+ SAFD         D E
Sbjct: 115 EDDDEEKSGLTGEVDGEEEDEPVV-SFTGKKKSSKKGGGSLFSASAFD---------DGE 164

Query: 598 DTEEKTI 618
           + E++T+
Sbjct: 165 EEEDETV 171


>ref|XP_004154455.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101204360
           [Cucumis sativus]
          Length = 1370

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +1

Query: 64  MGRKKPTTVDEN--PVAPSQGGKSKKKSRAIDDDEYMIGSEALEDQLQQNQEEVAVAXXX 237
           MGRKKPT  D++  P A   GGKSKKK+ A+DDDEY IG+E L ++ Q  +E+V +    
Sbjct: 1   MGRKKPTARDDDSAPAAAHGGGKSKKKTFAVDDDEYSIGTE-LSEEAQIQEEKVVITGKK 59

Query: 238 XXXXXXXXXAQSKDNDEE 291
                    +Q KD+D+E
Sbjct: 60  KGKKGNSKASQLKDDDDE 77


>ref|XP_004139637.1| PREDICTED: uncharacterized protein LOC101204360 [Cucumis sativus]
          Length = 1370

 Score = 63.5 bits (153), Expect = 7e-08
 Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
 Frame = +1

Query: 64  MGRKKPTTVDEN--PVAPSQGGKSKKKSRAIDDDEYMIGSEALEDQLQQNQEEVAVAXXX 237
           MGRKKPT  D++  P A   GGKSKKK+ A+DDDEY IG+E L ++ Q  +E+V +    
Sbjct: 1   MGRKKPTARDDDSAPAAAHGGGKSKKKTFAVDDDEYSIGTE-LSEEAQIQEEKVVITGKK 59

Query: 238 XXXXXXXXXAQSKDNDEE 291
                    +Q KD+D+E
Sbjct: 60  KGKKGNSKASQLKDDDDE 77


>ref|XP_003592124.1| Eukaryotic translation initiation factor 5B [Medicago truncatula]
           gi|355481172|gb|AES62375.1| Eukaryotic translation
           initiation factor 5B [Medicago truncatula]
          Length = 1438

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 53/197 (26%), Positives = 73/197 (37%), Gaps = 7/197 (3%)
 Frame = +1

Query: 64  MGRKKPTTVD-ENPVAPSQGGKSKKKSRAIDDDEYMIGSEALEDQLQQNQEEVAVAXXXX 240
           MG+KKP   D ENP     GGKSKKK+  IDDDEY IG E  ED +    EE  V     
Sbjct: 1   MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEVSEDAIPVAVEEKPVKKKGK 60

Query: 241 XXXXXXXXAQSKDNDEEIALEEXXXXXXXXXXFTXXXXXXXXXXXXXLFSASNFDVL--- 411
                       D D+ + +++          F                 AS F VL   
Sbjct: 61  KGNAKSKKDNDDDFDDAVVVDD---DDVNEIVFAGKKKGKSKKSSGGSVFASGFGVLGDE 117

Query: 412 ---DGEDNEKGKXXXXXXXXXXXXXXPIVXXXXXXXXXXXXXXNGVFTGSAFDAILDEGE 582
              D +D+EK +                                 VFT +A   +L + E
Sbjct: 118 EDVDNDDDEKSEVTGEGDDDEDEPVVSFTGKKKSSKGSKKGGGGSVFTAAAGFGLLGDDE 177

Query: 583 VIDVEDTEEKTIGEDKI 633
            +D +D EEK+  ++ +
Sbjct: 178 DVDNDDGEEKSDEDEPV 194


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