BLASTX nr result

ID: Cimicifuga21_contig00014116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014116
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...    82   4e-14
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...    80   2e-13
ref|XP_003592151.1| Multidrug resistance protein ABC transporter...    79   4e-13
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...    77   1e-12
emb|CBI22551.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 43/74 (58%), Positives = 53/74 (71%)
 Frame = -2

Query: 223  ITFVIGQILQNFWMASNVQNPDVSELRLIIVYLIIGFVSTLFLLARSLSVVSLGMXXXXX 44
            +TFV+GQILQN WMA++V NP VS L+LI+VYL+IG +STLFLL RSL VV+LG+     
Sbjct: 927  LTFVVGQILQNSWMAASVDNPQVSTLQLILVYLLIGVISTLFLLMRSLFVVALGLQSSKS 986

Query: 43   XXXXXXXXXFRAPM 2
                     FRAPM
Sbjct: 987  LFSQLLNSLFRAPM 1000


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/74 (60%), Positives = 48/74 (64%)
 Frame = -2

Query: 223  ITFVIGQILQNFWMASNVQNPDVSELRLIIVYLIIGFVSTLFLLARSLSVVSLGMXXXXX 44
            +TFVIGQI QN WMA+NV  P VS LRLI VYLIIG  STLFLL RSLS V LG+     
Sbjct: 929  LTFVIGQIAQNSWMAANVDKPQVSPLRLIAVYLIIGVSSTLFLLCRSLSTVVLGLQSSKS 988

Query: 43   XXXXXXXXXFRAPM 2
                     FRAPM
Sbjct: 989  LFSQLLNSLFRAPM 1002


>ref|XP_003592151.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355481199|gb|AES62402.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1516

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/74 (58%), Positives = 49/74 (66%)
 Frame = -2

Query: 223  ITFVIGQILQNFWMASNVQNPDVSELRLIIVYLIIGFVSTLFLLARSLSVVSLGMXXXXX 44
            I FVIGQILQN WMA+NV NP V+ LRLI+VYL IG  ST+FLL RSL  V+LG+     
Sbjct: 948  IIFVIGQILQNSWMAANVDNPKVTTLRLILVYLFIGVTSTIFLLMRSLFTVALGLQSSKS 1007

Query: 43   XXXXXXXXXFRAPM 2
                     FRAPM
Sbjct: 1008 LFLQLLNSLFRAPM 1021


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = -2

Query: 223  ITFVIGQILQNFWMASNVQNPDVSELRLIIVYLIIGFVSTLFLLARSLSVVSLGMXXXXX 44
            I FV GQI QN WMA+NV NP++S L+LI+VYL+IG  STLFLL+R+L VV+LG+     
Sbjct: 980  ILFVAGQISQNSWMAANVDNPNISTLQLIVVYLLIGATSTLFLLSRALFVVALGLQSSKS 1039

Query: 43   XXXXXXXXXFRAPM 2
                     FRAPM
Sbjct: 1040 LFTQLLNSLFRAPM 1053


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 51/74 (68%)
 Frame = -2

Query: 223  ITFVIGQILQNFWMASNVQNPDVSELRLIIVYLIIGFVSTLFLLARSLSVVSLGMXXXXX 44
            I FV GQI QN WMA+NV NP++S L+LI+VYL+IG  STLFLL+R+L VV+LG+     
Sbjct: 843  ILFVAGQISQNSWMAANVDNPNISTLQLIVVYLLIGATSTLFLLSRALFVVALGLQSSKS 902

Query: 43   XXXXXXXXXFRAPM 2
                     FRAPM
Sbjct: 903  LFTQLLNSLFRAPM 916


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