BLASTX nr result
ID: Cimicifuga21_contig00014115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00014115
(851 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI34465.3| unnamed protein product [Vitis vinifera] 117 5e-48
ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246... 111 2e-46
ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246... 111 1e-42
ref|XP_004143873.1| PREDICTED: uncharacterized protein LOC101210... 100 3e-42
ref|XP_002303641.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-39
>emb|CBI34465.3| unnamed protein product [Vitis vinifera]
Length = 564
Score = 117 bits (292), Expect(2) = 5e-48
Identities = 70/130 (53%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Frame = -1
Query: 806 SPSSRGILVKMIQCLQSLCK---TXXXXXXXXXXXXPQKFQRNPFREINNVKFCGSRRFI 636
S RG L +I CLQ L K T Q QRN R + K CG R
Sbjct: 367 SGKRRGALAMVITCLQPLWKFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVG 426
Query: 635 SKRRGTICCGF-LPVDPWAPTIDSQSIASQLFAASLFPYLGFLYFISKSKSAPKXXXXXX 459
KRRG I CG LPVDPWAPTIDSQSIASQLFA SLFPY+GFLYFI+KSK+APK
Sbjct: 427 EKRRGVIVCGLPLPVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGF 486
Query: 458 XXXXXFVGAT 429
FVGAT
Sbjct: 487 YFLLAFVGAT 496
Score = 101 bits (251), Expect(2) = 5e-48
Identities = 54/67 (80%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = -2
Query: 328 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLRGALRKAKVANGSTPD-VSE 152
IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLR ALRKA A S+ D VS
Sbjct: 497 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLREALRKAGDAKESSSDVVSG 556
Query: 151 IKEDKKS 131
IKE++ S
Sbjct: 557 IKEEEPS 563
>ref|XP_002272795.1| PREDICTED: uncharacterized protein LOC100246730 isoform 1 [Vitis
vinifera]
Length = 189
Score = 111 bits (278), Expect(2) = 2e-46
Identities = 66/120 (55%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Frame = -1
Query: 776 MIQCLQSLCK---TXXXXXXXXXXXXPQKFQRNPFREINNVKFCGSRRFISKRRGTICCG 606
+I CLQ L K T Q QRN R + K CG R KRRG I CG
Sbjct: 2 VITCLQPLWKFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCG 61
Query: 605 F-LPVDPWAPTIDSQSIASQLFAASLFPYLGFLYFISKSKSAPKXXXXXXXXXXXFVGAT 429
LPVDPWAPTIDSQSIASQLFA SLFPY+GFLYFI+KSK+APK FVGAT
Sbjct: 62 LPLPVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 121
Score = 101 bits (251), Expect(2) = 2e-46
Identities = 54/67 (80%), Positives = 58/67 (86%), Gaps = 1/67 (1%)
Frame = -2
Query: 328 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLRGALRKAKVANGSTPD-VSE 152
IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLR ALRKA A S+ D VS
Sbjct: 122 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLREALRKAGDAKESSSDVVSG 181
Query: 151 IKEDKKS 131
IKE++ S
Sbjct: 182 IKEEEPS 188
>ref|XP_003631398.1| PREDICTED: uncharacterized protein LOC100246730 isoform 2 [Vitis
vinifera]
Length = 183
Score = 111 bits (278), Expect(2) = 1e-42
Identities = 66/120 (55%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Frame = -1
Query: 776 MIQCLQSLCK---TXXXXXXXXXXXXPQKFQRNPFREINNVKFCGSRRFISKRRGTICCG 606
+I CLQ L K T Q QRN R + K CG R KRRG I CG
Sbjct: 2 VITCLQPLWKFPSTFLGSSSSSSSSLLQNLQRNFHRRSRDFKCCGGSRVGEKRRGVIVCG 61
Query: 605 F-LPVDPWAPTIDSQSIASQLFAASLFPYLGFLYFISKSKSAPKXXXXXXXXXXXFVGAT 429
LPVDPWAPTIDSQSIASQLFA SLFPY+GFLYFI+KSK+APK FVGAT
Sbjct: 62 LPLPVDPWAPTIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFGFYFLLAFVGAT 121
Score = 88.6 bits (218), Expect(2) = 1e-42
Identities = 48/64 (75%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Frame = -2
Query: 319 GIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLRGALRKAKVANGSTPD-VSEIKE 143
G KVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLR ALRKA A S+ D VS IKE
Sbjct: 119 GATTKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLREALRKAGDAKESSSDVVSGIKE 178
Query: 142 DKKS 131
++ S
Sbjct: 179 EEPS 182
>ref|XP_004143873.1| PREDICTED: uncharacterized protein LOC101210365 [Cucumis sativus]
gi|449501796|ref|XP_004161461.1| PREDICTED:
uncharacterized LOC101210365 [Cucumis sativus]
Length = 190
Score = 100 bits (249), Expect(2) = 3e-42
Identities = 53/87 (60%), Positives = 59/87 (67%)
Frame = -1
Query: 689 NPFREINNVKFCGSRRFISKRRGTICCGFLPVDPWAPTIDSQSIASQLFAASLFPYLGFL 510
NP+R +R FISKR G IC LPVDPWAP IDSQSIASQ+FA SLFPY+GFL
Sbjct: 34 NPYRISVEPHPLRNRSFISKRNGIICGAILPVDPWAPNIDSQSIASQIFAFSLFPYIGFL 93
Query: 509 YFISKSKSAPKXXXXXXXXXXXFVGAT 429
YFI+KSK+APK FVGAT
Sbjct: 94 YFITKSKTAPKLTLFGFYFLLAFVGAT 120
Score = 98.2 bits (243), Expect(2) = 3e-42
Identities = 48/65 (73%), Positives = 57/65 (87%), Gaps = 1/65 (1%)
Frame = -2
Query: 328 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLRGALRK-AKVANGSTPDVSE 152
IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLRGALRK + N ++ V E
Sbjct: 121 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRGALRKYGEAENSTSSSVLE 180
Query: 151 IKEDK 137
+++++
Sbjct: 181 LEKEE 185
>ref|XP_002303641.1| predicted protein [Populus trichocarpa] gi|222841073|gb|EEE78620.1|
predicted protein [Populus trichocarpa]
Length = 193
Score = 102 bits (255), Expect(2) = 3e-39
Identities = 53/69 (76%), Positives = 58/69 (84%), Gaps = 1/69 (1%)
Frame = -2
Query: 328 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVMGLRGALRKAKVANGSTPD-VSE 152
IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIV+GLR A+R S+ D VSE
Sbjct: 125 IPAGIYAKVHYGTSLSNVDWLHGGAESLLTLTNLFIVLGLRQAIRNENAPEKSSSDPVSE 184
Query: 151 IKEDKKSSV 125
I+E+KK SV
Sbjct: 185 IEEEKKPSV 193
Score = 86.3 bits (212), Expect(2) = 3e-39
Identities = 45/71 (63%), Positives = 50/71 (70%), Gaps = 3/71 (4%)
Frame = -1
Query: 632 KRRGTICCG---FLPVDPWAPTIDSQSIASQLFAASLFPYLGFLYFISKSKSAPKXXXXX 462
KR+ + CG PVDPWAP IDSQSIASQLFA SLFPY+GFLYFI+KSK+APK
Sbjct: 54 KRKRRVVCGAGLMFPVDPWAPNIDSQSIASQLFAFSLFPYIGFLYFITKSKTAPKLTLFG 113
Query: 461 XXXXXXFVGAT 429
FVGAT
Sbjct: 114 FYFLLAFVGAT 124