BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014110
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...   371   e-100
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...   357   3e-96
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...   346   5e-93
ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi...   342   8e-92
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...   338   2e-90

>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score =  371 bits (952), Expect = e-100
 Identities = 188/276 (68%), Positives = 215/276 (77%)
 Frame = +1

Query: 64  MAHATWLQPSSLSYALLPLFARRAKFPDKLRRFHHLFSNGHICSFKTTTRPPLMEVSAQA 243
           MA A+ L  S LS   LP+   R+         H   S     S     R PLM+V  QA
Sbjct: 1   MAFASCLHSSYLSNTFLPILRHRSALSTSTSHLHRFCSPSRFFSSANRFRLPLMQVQVQA 60

Query: 244 KRSFSSLKKDEVASPSDLLFESPLKIVEYPDPILRAPNKRIGSFDENLKNLVHEMFDIMY 423
           KR FS  K++ +ASP+DL FE+PLKIVEYPDPILRA NK I +FD+NLK LV EMFD+MY
Sbjct: 61  KRGFS-FKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMY 119

Query: 424 KTDGIGLSAPQVGINVRLMVFNPAGERGVGEEIVLINPRIFKYSRKLVLFDEGCLSFPGI 603
           KTDGIGLSAPQVGINV+LMVFNP GERG GEEIVL+NPR+ KYS+K+VLF+EGCLSFPGI
Sbjct: 120 KTDGIGLSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGI 179

Query: 604 YADVERPESVKADALDITGAKFSANLSGLPARVFQHEFDHLQGTLFFDRMTEEVVDSIRA 783
           YADVERPESVK DA DITGA+F  NLSGLPARVFQHEFDHLQGTLFFDRMTEEV+DSI A
Sbjct: 180 YADVERPESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSIHA 239

Query: 784 ELQALEKKYEDVTGMPSPENVDSRTRKRAAAGFGRS 891
            LQ LE+KYED TG PSPE +++R R++ AAGFG+S
Sbjct: 240 NLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGKS 275


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score =  357 bits (916), Expect = 3e-96
 Identities = 181/261 (69%), Positives = 213/261 (81%)
 Frame = +1

Query: 109 LLPLFARRAKFPDKLRRFHHLFSNGHICSFKTTTRPPLMEVSAQAKRSFSSLKKDEVASP 288
           LLP+  R+  F     RF+ L S      F +  +PP + V AQAKRSFS  K++E+A+P
Sbjct: 26  LLPVLFRQTGFSCNNFRFNQLSSTAR---FSSIAKPPSIPVRAQAKRSFS-FKEEEIATP 81

Query: 289 SDLLFESPLKIVEYPDPILRAPNKRIGSFDENLKNLVHEMFDIMYKTDGIGLSAPQVGIN 468
           +DL FE PLKIVEYPDPILR  NKRI +FD+NLK LV EMFD+MYKTDGIGLSAPQVGIN
Sbjct: 82  ADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQVGIN 141

Query: 469 VRLMVFNPAGERGVGEEIVLINPRIFKYSRKLVLFDEGCLSFPGIYADVERPESVKADAL 648
           V+LMVFNP GERG GEEIVLINPR+ KYS+K+V F+EGCLSFPGIYADV RPESVK DA 
Sbjct: 142 VQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKIDAR 201

Query: 649 DITGAKFSANLSGLPARVFQHEFDHLQGTLFFDRMTEEVVDSIRAELQALEKKYEDVTGM 828
           DI GA+F+ NLSGLPARVFQHE+DHL+G LFFDRMT+EV+DSIRA+LQALEKK+ED TG 
Sbjct: 202 DINGARFTVNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDKTGY 261

Query: 829 PSPENVDSRTRKRAAAGFGRS 891
            SPE +++R  K+AAAGFG+S
Sbjct: 262 ASPEKIETRKTKKAAAGFGKS 282


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score =  346 bits (888), Expect = 5e-93
 Identities = 181/276 (65%), Positives = 217/276 (78%)
 Frame = +1

Query: 64  MAHATWLQPSSLSYALLPLFARRAKFPDKLRRFHHLFSNGHICSFKTTTRPPLMEVSAQA 243
           MA+AT L   SL +ALLP  +     P   RR     S   + S  +  + P   V AQA
Sbjct: 1   MAYATRLH-ISLPHALLPTVSCWLSPPAVFRRLSGFSSTCKLFSHSSKFKAPSTLVYAQA 59

Query: 244 KRSFSSLKKDEVASPSDLLFESPLKIVEYPDPILRAPNKRIGSFDENLKNLVHEMFDIMY 423
           KR FS+ K+D+VAS  DL FE+PLKIVEYPDPILRA NKRIGSFD+NLK LV EMFD+MY
Sbjct: 60  KRGFSA-KEDDVASSVDLEFEAPLKIVEYPDPILRAKNKRIGSFDDNLKKLVQEMFDVMY 118

Query: 424 KTDGIGLSAPQVGINVRLMVFNPAGERGVGEEIVLINPRIFKYSRKLVLFDEGCLSFPGI 603
           KTDGIGLSAPQVG+NV+LMVFN  GERG GEEIVL+NP++++YS+K VLF+EGCLSFP I
Sbjct: 119 KTDGIGLSAPQVGVNVQLMVFNSVGERGEGEEIVLVNPKVYRYSKKTVLFNEGCLSFPMI 178

Query: 604 YADVERPESVKADALDITGAKFSANLSGLPARVFQHEFDHLQGTLFFDRMTEEVVDSIRA 783
           YADVERPES+K DA DI+G +F  NLSGL ARVFQHEFDHLQGTLFFDRMT+EV+++IR 
Sbjct: 179 YADVERPESIKIDARDISGTRFMVNLSGLSARVFQHEFDHLQGTLFFDRMTDEVLETIRP 238

Query: 784 ELQALEKKYEDVTGMPSPENVDSRTRKRAAAGFGRS 891
           +LQALEKKYED TG+PSPE +++  R++  AGFG+S
Sbjct: 239 QLQALEKKYEDRTGLPSPERIEN-FRRKVGAGFGKS 273


>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
           gi|222847305|gb|EEE84852.1| peptide deformylase [Populus
           trichocarpa]
          Length = 258

 Score =  342 bits (878), Expect = 8e-92
 Identities = 171/226 (75%), Positives = 194/226 (85%)
 Frame = +1

Query: 211 RPPLMEVSAQAKRSFSSLKKDEVASPSDLLFESPLKIVEYPDPILRAPNKRIGSFDENLK 390
           RPP + V +QAKR    LK+D+VA+ SDL FE+PLKIVEYPDPILRA NKRI SFD+NLK
Sbjct: 34  RPPSLFVRSQAKRG-PFLKQDQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDSFDDNLK 92

Query: 391 NLVHEMFDIMYKTDGIGLSAPQVGINVRLMVFNPAGERGVGEEIVLINPRIFKYSRKLVL 570
            LV EMFD+MYKTDGIGLSAPQVGINV+LMVFNPA E G G+EIVL+NPR+ KYS+K VL
Sbjct: 93  KLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKYSKKTVL 152

Query: 571 FDEGCLSFPGIYADVERPESVKADALDITGAKFSANLSGLPARVFQHEFDHLQGTLFFDR 750
           F+EGCLSFPGIYADV+RPESVK DA DI GA+F+ NLSGLPARVFQHEFDHLQG LFFDR
Sbjct: 153 FNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQGILFFDR 212

Query: 751 MTEEVVDSIRAELQALEKKYEDVTGMPSPENVDSRTRKRAAAGFGR 888
           MTEEV+DSIR  LQALEKKYED TG PSPE +++   K+ AAGFG+
Sbjct: 213 MTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score =  338 bits (866), Expect = 2e-90
 Identities = 172/279 (61%), Positives = 216/279 (77%), Gaps = 2/279 (0%)
 Frame = +1

Query: 61  AMAHATWLQPSSLSYALLPLFARRAKFPDKLRRFHHLFSNGHICSFKTTT-RPPLMEVSA 237
           AMA A+W   SS +  L PL +R +  P  +    H + + +   F  ++ +PP + V A
Sbjct: 2   AMAAASWASSSSFTRFLRPLLSRNSS-PSPISYSLHRYKSANCLFFSASSNKPPKLAVYA 60

Query: 238 QAKRSFSSLKK-DEVASPSDLLFESPLKIVEYPDPILRAPNKRIGSFDENLKNLVHEMFD 414
           QA+R  SS  K DE+A+P+DL F  PLKIVEYPDPILRA NKRI +FD NLK LV EMFD
Sbjct: 61  QARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFD 120

Query: 415 IMYKTDGIGLSAPQVGINVRLMVFNPAGERGVGEEIVLINPRIFKYSRKLVLFDEGCLSF 594
           IMYKTDGIGLSAPQVG+NV+LMVFN AGERG GEEIVL+NPR+ +YSR+++ ++EGCLSF
Sbjct: 121 IMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSF 180

Query: 595 PGIYADVERPESVKADALDITGAKFSANLSGLPARVFQHEFDHLQGTLFFDRMTEEVVDS 774
           P I+ DV+RPESVK DA DI G +F  +LS LPARVFQHEFDHLQG LFFD+MT+EV+D+
Sbjct: 181 PMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDT 240

Query: 775 IRAELQALEKKYEDVTGMPSPENVDSRTRKRAAAGFGRS 891
           IR +L ALEKKYED TG+P+PE++++R  K+AA GFG+S
Sbjct: 241 IREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS 279