BLASTX nr result

ID: Cimicifuga21_contig00014102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014102
         (949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aesti...   259   5e-67
ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, puta...   234   2e-59
gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha cur...   228   2e-57
gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [D...   227   3e-57
dbj|BAA78047.1| GGPP synthase [Daucus carota]                         227   3e-57

>gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 359

 Score =  259 bits (663), Expect = 5e-67
 Identities = 138/195 (70%), Positives = 151/195 (77%), Gaps = 8/195 (4%)
 Frame = +2

Query: 5   SNHKVFGEETIVLAGDALMSLAFEHVA-RSTSASPDRVVRVIAELGLAFGSDGLVGGQIV 181
           +NHK FGEET VLAGDAL+SLAFEHVA RST  S DRVVRVIAELG   GSDGLVGGQIV
Sbjct: 164 TNHKAFGEETAVLAGDALLSLAFEHVATRSTGVSADRVVRVIAELGKCVGSDGLVGGQIV 223

Query: 182 DITSKGKDIDLGELEYIHVHKTSMLLEXXXXXXXXXXXXXXXDVERLHKYGRYIGLLFQV 361
           DI S GK I+L ELEYIH+HKT++LLE               D+ERL KY RYIGLLFQV
Sbjct: 224 DIASAGKQIELSELEYIHLHKTAILLEASVVCGAIMGGGMAPDIERLRKYARYIGLLFQV 283

Query: 362 VDDILDATKS-------VGKDLAIDKATYPKLMGVEKAKEFANALLAQAHKELSYYNSTK 520
           VDDILD TKS        GKDLA DKATYPKLMG++KAKEFA+AL+AQAHKEL YY+  K
Sbjct: 284 VDDILDVTKSSEELGKTAGKDLATDKATYPKLMGIDKAKEFADALVAQAHKELDYYDFAK 343

Query: 521 AAPLYHFANYIAQRQ 565
           AAPLYHFA+YIA RQ
Sbjct: 344 AAPLYHFADYIAYRQ 358


>ref|XP_002531191.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
           gi|223529232|gb|EEF31206.1| geranyl geranyl
           pyrophosphate synthase, putative [Ricinus communis]
          Length = 372

 Score =  234 bits (598), Expect = 2e-59
 Identities = 122/195 (62%), Positives = 147/195 (75%), Gaps = 8/195 (4%)
 Frame = +2

Query: 5   SNHKVFGEETIVLAGDALMSLAFEHVARST-SASPDRVVRVIAELGLAFGSDGLVGGQIV 181
           +NHK+FGEET +LAGDAL+S +FEHVARST + SPDRVVR IAELG A GS+GLV GQIV
Sbjct: 177 TNHKMFGEETAILAGDALLSFSFEHVARSTKNVSPDRVVRAIAELGSAVGSEGLVAGQIV 236

Query: 182 DITSKGKDIDLGELEYIHVHKTSMLLEXXXXXXXXXXXXXXXDVERLHKYGRYIGLLFQV 361
           DI S+GKD+ + +LEYIH+HKT+ LLE                VER+ KY R IGLLFQV
Sbjct: 237 DIDSEGKDVSVSDLEYIHIHKTAKLLEASVVCGAILGGADDESVERVRKYARCIGLLFQV 296

Query: 362 VDDILDATKS-------VGKDLAIDKATYPKLMGVEKAKEFANALLAQAHKELSYYNSTK 520
           VDDILD TKS        GKDL  DKATYPKLMG+++A++ A  L+ QA++EL+Y++S K
Sbjct: 297 VDDILDVTKSSEELGKTAGKDLITDKATYPKLMGIDEARKLAAKLVDQANQELAYFDSAK 356

Query: 521 AAPLYHFANYIAQRQ 565
           AAPLYHFANYIA RQ
Sbjct: 357 AAPLYHFANYIASRQ 371


>gb|ADD82422.1| geranylgeranyl diphosphate synthase [Jatropha curcas]
          Length = 370

 Score =  228 bits (581), Expect = 2e-57
 Identities = 114/195 (58%), Positives = 149/195 (76%), Gaps = 8/195 (4%)
 Frame = +2

Query: 5   SNHKVFGEETIVLAGDALMSLAFEHVARST-SASPDRVVRVIAELGLAFGSDGLVGGQIV 181
           +NHK+FGEET +LAGDA++SLAFEH+AR+T + SP+RVVRVI ELG A GS+GLV GQIV
Sbjct: 175 TNHKMFGEETAILAGDAMLSLAFEHIARATKNVSPERVVRVITELGSAVGSEGLVAGQIV 234

Query: 182 DITSKGKDIDLGELEYIHVHKTSMLLEXXXXXXXXXXXXXXXDVERLHKYGRYIGLLFQV 361
           D+ S+GK++++ +LEYIH+HKT+ LLE                +ER+ KY R IGLLFQV
Sbjct: 235 DVCSEGKEVNVKDLEYIHIHKTAKLLEAAVVCGAIAGGADDESIERVRKYARCIGLLFQV 294

Query: 362 VDDILDATKS-------VGKDLAIDKATYPKLMGVEKAKEFANALLAQAHKELSYYNSTK 520
           +DDILD TKS        GKDL  DKATYPKL+G+++A++ A  L+ +A++EL+Y++S K
Sbjct: 295 IDDILDVTKSSEELGKTAGKDLVSDKATYPKLLGIDEARKLAAKLVDEANQELAYFDSAK 354

Query: 521 AAPLYHFANYIAQRQ 565
           AAPLYHFANYIA RQ
Sbjct: 355 AAPLYHFANYIASRQ 369


>gb|ABB52066.1| putative geranylgeranyl pyrophosphate synthase [Daucus carota
           subsp. sativus]
          Length = 367

 Score =  227 bits (579), Expect = 3e-57
 Identities = 123/195 (63%), Positives = 142/195 (72%), Gaps = 9/195 (4%)
 Frame = +2

Query: 5   SNHKVFGEETIVLAGDALMSLAFEHVARSTS-ASPDRVVRVIAELGLAFGSDGLVGGQIV 181
           +NHKV+GEET +LAGDAL+SLAFEHVA +T   +P RVVR IAELG A GS GLV GQI+
Sbjct: 171 TNHKVYGEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIM 230

Query: 182 DITSKGKDIDLGELEYIHVHKTSMLLEXXXXXXXXXXXXXXXDVERLHKYGRYIGLLFQV 361
           DI ++GKD+DL +LEYIHVHKTS LLE               +VERL KY R IGLLFQV
Sbjct: 231 DICNQGKDVDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQV 290

Query: 362 VDDILDATKS-------VGKDLAIDKATYPKLMGVEKAKEFANALLAQAHKELSYY-NST 517
           VDDILD TKS        GKDL  DK TYPKLMG+E+AK FA  L+AQA +ELSY+ +ST
Sbjct: 291 VDDILDVTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSST 350

Query: 518 KAAPLYHFANYIAQR 562
           + APLYH A YIA R
Sbjct: 351 RVAPLYHLAKYIAYR 365


>dbj|BAA78047.1| GGPP synthase [Daucus carota]
          Length = 367

 Score =  227 bits (579), Expect = 3e-57
 Identities = 123/196 (62%), Positives = 142/196 (72%), Gaps = 9/196 (4%)
 Frame = +2

Query: 5   SNHKVFGEETIVLAGDALMSLAFEHVARSTS-ASPDRVVRVIAELGLAFGSDGLVGGQIV 181
           +NHKV+GEET +LAGDAL+SLAFEHVA +T   +P RVVR IAELG A GS GLV GQI+
Sbjct: 171 TNHKVYGEETAILAGDALLSLAFEHVADATDMVTPGRVVRAIAELGSAVGSQGLVAGQIM 230

Query: 182 DITSKGKDIDLGELEYIHVHKTSMLLEXXXXXXXXXXXXXXXDVERLHKYGRYIGLLFQV 361
           DI ++GKD+DL +LEYIHVHKTS LLE               +VERL KY R IGLLFQV
Sbjct: 231 DICNQGKDVDLNDLEYIHVHKTSKLLEASVVCGAILGGGNVIEVERLRKYARCIGLLFQV 290

Query: 362 VDDILDATKS-------VGKDLAIDKATYPKLMGVEKAKEFANALLAQAHKELSYY-NST 517
           VDDILD TKS        GKDL  DK TYPKLMG+E+AK FA  L+AQA +ELSY+ +S 
Sbjct: 291 VDDILDVTKSSAELGKTAGKDLVTDKTTYPKLMGLERAKRFATELVAQAEEELSYFGSSA 350

Query: 518 KAAPLYHFANYIAQRQ 565
           + APLYH A YIA RQ
Sbjct: 351 RVAPLYHLAKYIAYRQ 366


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