BLASTX nr result

ID: Cimicifuga21_contig00014087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014087
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331458.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14
ref|NP_197680.2| C2H2 and C2HC zinc finger-containing protein [A...    82   6e-14
dbj|BAB10610.1| unnamed protein product [Arabidopsis thaliana] g...    82   6e-14
ref|XP_002874102.1| zinc finger family protein [Arabidopsis lyra...    82   6e-14
emb|CBI17128.3| unnamed protein product [Vitis vinifera]               82   6e-14

>ref|XP_002331458.1| predicted protein [Populus trichocarpa] gi|222873536|gb|EEF10667.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +2

Query: 269 FSVLSDLRTHEKHCGDIKLKCSCGTTFSRKDKLRSHVNLFFGH 397
           FSVLSDLRTHEKHCGD+K  CSCGTTFSRKDKL  HV LFFGH
Sbjct: 123 FSVLSDLRTHEKHCGDLKWLCSCGTTFSRKDKLMGHVALFFGH 165



 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 39/51 (76%), Gaps = 8/51 (15%)
 Frame = +1

Query: 1   SNPMKNSNSST--------KSERKYSCPQEGCKWNRKHAKFQPLKSMICVK 129
           SNPMKN+ ++T        K  RKYSCP EGC+WNRKHAKFQPLKSMICVK
Sbjct: 51  SNPMKNNPTATPENKEASMKLPRKYSCPHEGCRWNRKHAKFQPLKSMICVK 101


>ref|NP_197680.2| C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]
           gi|110743777|dbj|BAE99724.1| hypothetical protein
           [Arabidopsis thaliana] gi|332005711|gb|AED93094.1| C2H2
           and C2HC zinc finger-containing protein [Arabidopsis
           thaliana]
          Length = 373

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +2

Query: 269 FSVLSDLRTHEKHCGDIKLKCSCGTTFSRKDKLRSHVNLFFGH 397
           FSVLSDLRTHEKHCGDIK  CSCGT FSRKDKL SHV+LF GH
Sbjct: 316 FSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGH 358



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 49  YSCPQEGCKWNRKHAKFQPLKSMICVK 129
           YSCPQ GC+WN++H KFQPLKS+IC K
Sbjct: 268 YSCPQHGCRWNQRHEKFQPLKSVICAK 294


>dbj|BAB10610.1| unnamed protein product [Arabidopsis thaliana]
           gi|28466935|gb|AAO44076.1| At5g22890 [Arabidopsis
           thaliana]
          Length = 235

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +2

Query: 269 FSVLSDLRTHEKHCGDIKLKCSCGTTFSRKDKLRSHVNLFFGH 397
           FSVLSDLRTHEKHCGDIK  CSCGT FSRKDKL SHV+LF GH
Sbjct: 178 FSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGH 220



 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 20/27 (74%), Positives = 24/27 (88%)
 Frame = +1

Query: 49  YSCPQEGCKWNRKHAKFQPLKSMICVK 129
           YSCPQ GC+WN++H KFQPLKS+IC K
Sbjct: 130 YSCPQHGCRWNQRHEKFQPLKSVICAK 156


>ref|XP_002874102.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319939|gb|EFH50361.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 368

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 37/43 (86%), Positives = 38/43 (88%)
 Frame = +2

Query: 269 FSVLSDLRTHEKHCGDIKLKCSCGTTFSRKDKLRSHVNLFFGH 397
           FSVLSDLRTHEKHCGDIK  CSCGT FSRKDKL SHV+LF GH
Sbjct: 310 FSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGH 352



 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 31  TKSERKYSCPQEGCKWNRKHAKFQPLKSMICVK 129
           T  +  YSCP +GC+WN++H KFQPLKS+IC K
Sbjct: 256 TLKKHYYSCPHQGCRWNQRHEKFQPLKSVICAK 288


>emb|CBI17128.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score = 82.0 bits (201), Expect = 6e-14
 Identities = 37/48 (77%), Positives = 38/48 (79%)
 Frame = +2

Query: 269 FSVLSDLRTHEKHCGDIKLKCSCGTTFSRKDKLRSHVNLFFGHNQVAN 412
           FSVLSDLRTHEKHCGD+K  CSCGTTFSRKDKL  HV LF GH    N
Sbjct: 304 FSVLSDLRTHEKHCGDLKWLCSCGTTFSRKDKLMGHVALFVGHTPAIN 351



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = +1

Query: 10  MKNSNSSTKSERKYSCPQEGCKWNRKHAKFQPLKSMICVK 129
           M+N +   K  RKYSCPQEGC+WNRKHAKFQPLKSMICVK
Sbjct: 243 MENKDDLIKLPRKYSCPQEGCRWNRKHAKFQPLKSMICVK 282