BLASTX nr result

ID: Cimicifuga21_contig00014073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014073
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus r...   125   4e-27
ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-...   124   1e-26
emb|CAN81196.1| hypothetical protein VITISV_022855 [Vitis vinifera]   120   1e-25
ref|XP_002511955.1| Common plant regulatory factor CPRF-1, putat...   118   5e-25
ref|XP_003554746.1| PREDICTED: common plant regulatory factor 1-...   117   8e-25

>gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus roseus]
          Length = 426

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/119 (53%), Positives = 72/119 (60%)
 Frame = -3

Query: 406 MGNEEAGTPSKSEKPSSPAQEQSSIPAYPNWAAVQAYYGPGVNIPPPYFNSAVASGHPPH 227
           MG+ E    SK EK SSPA EQS++  YP+WAA+QAYYGP V +PP YF+SAVASGHPPH
Sbjct: 1   MGSSEETKSSKPEKSSSPAPEQSNVHVYPDWAAMQAYYGPRVAVPP-YFSSAVASGHPPH 59

Query: 226 PYMXXXXXXXXXXXXXXXXXXXXXXXPHPYMWGAPQHLMSPYGTPYAAIYPPGGVYAHP 50
           P                            YMWG PQ +M PYGTPYAAIY  GGVY HP
Sbjct: 60  P----------------------------YMWGPPQPMMPPYGTPYAAIYAHGGVYTHP 90


>ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-like [Vitis vinifera]
           gi|297745388|emb|CBI40468.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  124 bits (310), Expect = 1e-26
 Identities = 69/140 (49%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
 Frame = -3

Query: 406 MGNEEAGTPSKSEKPSSPAQ-EQSSIPAYPNWAAVQAYYGPGVNIPPPYFNSAVASGHPP 230
           MGNEE G   K EKP+SP   +Q++I  YP+WAA+QAYYGP V + PPY+NSA+ASGH P
Sbjct: 1   MGNEEEGKSPKPEKPTSPPPPDQANIHVYPDWAAMQAYYGPRVTL-PPYYNSAMASGHAP 59

Query: 229 HPYMXXXXXXXXXXXXXXXXXXXXXXXPHPYMWGAPQHLMSPYGTPYAAIYPPGGVYAHP 50
                                       HPY+WG PQ +M PYG PYAAIY PGGVY HP
Sbjct: 60  ----------------------------HPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHP 91

Query: 49  SY-LG---QGLGNSSSPLAS 2
           +  LG    G G  SSP+ S
Sbjct: 92  AVPLGSHSHGHGVQSSPVVS 111


>emb|CAN81196.1| hypothetical protein VITISV_022855 [Vitis vinifera]
          Length = 429

 Score =  120 bits (301), Expect = 1e-25
 Identities = 61/121 (50%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = -3

Query: 406 MGNEEAGTPSKSEKPSSPAQ-EQSSIPAYPNWAAVQAYYGPGVNIPPPYFNSAVASGHPP 230
           MGNEE G   K EKP+SP   +Q++I  YP+WAA+QAYYGP V + PPY+NSA+ASGH P
Sbjct: 1   MGNEEEGKSPKPEKPTSPPPPDQANIHVYPDWAAMQAYYGPRVTL-PPYYNSAMASGHAP 59

Query: 229 HPYMXXXXXXXXXXXXXXXXXXXXXXXPHPYMWGAPQHLMSPYGTPYAAIYPPGGVYAHP 50
                                       HPY+WG PQ +M PYG PYAAIY PGGVY HP
Sbjct: 60  ----------------------------HPYIWGPPQPMMPPYGPPYAAIYSPGGVYPHP 91

Query: 49  S 47
           +
Sbjct: 92  A 92


>ref|XP_002511955.1| Common plant regulatory factor CPRF-1, putative [Ricinus communis]
           gi|223549135|gb|EEF50624.1| Common plant regulatory
           factor CPRF-1, putative [Ricinus communis]
          Length = 401

 Score =  118 bits (296), Expect = 5e-25
 Identities = 66/139 (47%), Positives = 82/139 (58%), Gaps = 5/139 (3%)
 Frame = -3

Query: 406 MGNEEAGTPSKSEKPSSPAQ-EQSSIPAYPNWAAVQAYYGPGVNIPPPYFNSAVASGHPP 230
           MGN E G  +K +K SSPA  +Q++I  YP+WAA+QAYYGP + + PPY+NSA+ASGH P
Sbjct: 3   MGNNEEGKSAKRDKSSSPAPPDQANIHVYPDWAAMQAYYGPRMAL-PPYYNSAMASGHAP 61

Query: 229 HPYMXXXXXXXXXXXXXXXXXXXXXXXPHPYMWGAPQHLMSPYGTPYAAIYPPGGVYAHP 50
           H                            PYMWG PQ +M PYGTPYAA+Y  GGVYAHP
Sbjct: 62  H----------------------------PYMWGPPQPMMPPYGTPYAAVYSHGGVYAHP 93

Query: 49  SY-LGQ---GLGNSSSPLA 5
           +  +G    G G  +SP A
Sbjct: 94  AVPIGSQPPGHGVPASPAA 112


>ref|XP_003554746.1| PREDICTED: common plant regulatory factor 1-like [Glycine max]
          Length = 425

 Score =  117 bits (294), Expect = 8e-25
 Identities = 62/127 (48%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
 Frame = -3

Query: 406 MGNEEAGTPSKSEKPSSPAQ-------EQSSIPAYPNWAAVQAYYGPGVNIPPPYFNSAV 248
           MGN E    +K+EKPSSP          Q++I  YP+WAA+QAYYGP V + PPY+NSAV
Sbjct: 1   MGNSEEEKSTKTEKPSSPVTVDQANQTNQTNIHVYPDWAAMQAYYGPRVTM-PPYYNSAV 59

Query: 247 ASGHPPHPYMXXXXXXXXXXXXXXXXXXXXXXXPHPYMWGAPQHLMSPYGTPYAAIYPPG 68
           ASGH PH                            PYMWG PQ +M PYG PYAAIYP G
Sbjct: 60  ASGHAPH----------------------------PYMWGPPQPMMPPYGPPYAAIYPHG 91

Query: 67  GVYAHPS 47
           GVY HP+
Sbjct: 92  GVYTHPA 98


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