BLASTX nr result

ID: Cimicifuga21_contig00014046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014046
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66133.1| hypothetical protein VITISV_026878 [Vitis vinifera]    56   3e-06
emb|CAN71776.1| hypothetical protein VITISV_002511 [Vitis vinifera]    56   3e-06
emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]    56   3e-06
emb|CAN65924.1| hypothetical protein VITISV_005717 [Vitis vinifera]    56   3e-06

>emb|CAN66133.1| hypothetical protein VITISV_026878 [Vitis vinifera]
          Length = 1302

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
 Frame = -3

Query: 174 IGNPPSFDGNNFVSWKPKMMAYLQSLGEDVWNVVEFGWKPP--VKNEGT*ENMVTVPKPK 1
           IG PP   G N+  WK +M  +L+   E+VWN VEFGW PP  +  EG   N++   KPK
Sbjct: 10  IGRPPFSTGENYFHWKVRMQYFLKMQSENVWNAVEFGWSPPKVLDREGRSTNVI---KPK 66


>emb|CAN71776.1| hypothetical protein VITISV_002511 [Vitis vinifera]
          Length = 177

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -3

Query: 174 IGNPPSFDGNNFVSWKPKMMAYLQSLGEDVWNVVEFGWKPP--VKNEGT*ENMVTVPKPK 1
           IG PP   G N+  WK +M  +L+   E VWN VEFGW PP  +  EG   N++   KPK
Sbjct: 10  IGRPPFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGWSPPKVLDREGRPTNVI---KPK 66


>emb|CAN75147.1| hypothetical protein VITISV_014145 [Vitis vinifera]
          Length = 783

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -3

Query: 174 IGNPPSFDGNNFVSWKPKMMAYLQSLGEDVWNVVEFGWKPP--VKNEGT*ENMVTVPKPK 1
           IG PP   G N+  WK +M  +L+   E VWN VEFGW PP  +  EG   N++   KPK
Sbjct: 10  IGRPPFLTGENYSHWKVRMQYFLKMQSEKVWNAVEFGWSPPKVLDREGRPTNVI---KPK 66


>emb|CAN65924.1| hypothetical protein VITISV_005717 [Vitis vinifera]
          Length = 266

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
 Frame = -3

Query: 174 IGNPPSFDGNNFVSWKPKMMAYLQSLGEDVWNVVEFGWKPP--VKNEGT*ENMVTVPKPK 1
           IG PP   G N+  WK +M  +L+   E VWN VEFGW PP  +  EG   N++   KPK
Sbjct: 10  IGRPPFLTGENYSHWKVRMQYFLKRQSEKVWNAVEFGWSPPKVLDREGRPTNVI---KPK 66


Top