BLASTX nr result

ID: Cimicifuga21_contig00014038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014038
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285704.2| PREDICTED: transcription initiation factor T...    78   8e-13
emb|CBI16511.3| unnamed protein product [Vitis vinifera]               78   8e-13
ref|XP_004142764.1| PREDICTED: transcription initiation factor T...    76   3e-12
ref|XP_004172889.1| PREDICTED: transcription initiation factor T...    75   4e-12
gb|ABA81879.1| unknown [Solanum tuberosum]                             75   4e-12

>ref|XP_002285704.2| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Vitis vinifera]
          Length = 205

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +3

Query: 132 ETSSSTGLNSIPAK--NDGRTRTFSIGNDHFPAALLDLPSIVESYKTYDGNVLIKTADIG 305
           E SSS+   S+      DGR+ TF IGNDHFPA+LLDLP ++ESYKTYD +VLIKTADIG
Sbjct: 32  ENSSSSEDKSLDLSFSEDGRSGTFVIGNDHFPASLLDLPCVLESYKTYDDSVLIKTADIG 91

Query: 306 Q 308
           Q
Sbjct: 92  Q 92


>emb|CBI16511.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/61 (65%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +3

Query: 132 ETSSSTGLNSIPAK--NDGRTRTFSIGNDHFPAALLDLPSIVESYKTYDGNVLIKTADIG 305
           E SSS+   S+      DGR+ TF IGNDHFPA+LLDLP ++ESYKTYD +VLIKTADIG
Sbjct: 23  ENSSSSEDKSLDLSFSEDGRSGTFVIGNDHFPASLLDLPCVLESYKTYDDSVLIKTADIG 82

Query: 306 Q 308
           Q
Sbjct: 83  Q 83


>ref|XP_004142764.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Cucumis sativus]
          Length = 201

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/58 (62%), Positives = 44/58 (75%)
 Frame = +3

Query: 135 TSSSTGLNSIPAKNDGRTRTFSIGNDHFPAALLDLPSIVESYKTYDGNVLIKTADIGQ 308
           +SS      +   +DGR+ TF+IG+DHFPA+LLDLP +VESYKTYD  VLIK ADIGQ
Sbjct: 26  SSSDDASLDLSFSDDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQ 83


>ref|XP_004172889.1| PREDICTED: transcription initiation factor TFIID subunit 7-like
           [Cucumis sativus]
          Length = 201

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = +3

Query: 135 TSSSTGLNSIPAKNDGRTRTFSIGNDHFPAALLDLPSIVESYKTYDGNVLIKTADIGQ 308
           +SS      +    DGR+ TF+IG+DHFPA+LLDLP +VESYKTYD  VLIK ADIGQ
Sbjct: 26  SSSDDASLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQ 83


>gb|ABA81879.1| unknown [Solanum tuberosum]
          Length = 197

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/59 (62%), Positives = 45/59 (76%)
 Frame = +3

Query: 132 ETSSSTGLNSIPAKNDGRTRTFSIGNDHFPAALLDLPSIVESYKTYDGNVLIKTADIGQ 308
           E SSS     +    DG+T +F IG++HFPA+LL+LP IVESYKTYD NVLIK+ADIGQ
Sbjct: 23  ENSSSEDKLDLSFSEDGKTGSFVIGDEHFPASLLNLPCIVESYKTYDDNVLIKSADIGQ 81


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