BLASTX nr result

ID: Cimicifuga21_contig00014023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00014023
         (1254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525514.1| conserved hypothetical protein [Ricinus comm...   311   2e-82
ref|XP_004141545.1| PREDICTED: TVP38/TMEM64 family membrane prot...   311   3e-82
emb|CBI31257.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_003605529.1| TVP38/TMEM64 family membrane protein slr0305...   301   2e-79
ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|1...   299   1e-78

>ref|XP_002525514.1| conserved hypothetical protein [Ricinus communis]
            gi|223535193|gb|EEF36872.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 334

 Score =  311 bits (798), Expect = 2e-82
 Identities = 173/278 (62%), Positives = 191/278 (68%), Gaps = 1/278 (0%)
 Frame = -3

Query: 1153 TSLLFPFKP-KRFHLFXXXXXXXXXXXXXXXXXXXKVPLSFKRLVNSNDNGDDDSKEKQX 977
            TS L+ F+P KRFH F                     P S +  +N   +GDDD K  + 
Sbjct: 32   TSFLYSFRPNKRFH-FLTPCSSLKQTKKQTLQKSNTAPQSLRWFLNPKGSGDDDDKINKG 90

Query: 976  XXXXXXXXXGAENAIKXXXXXXXXXXXXXXXXXXXGYIYRDQINAFLTQFTGFIEGYGTA 797
                       + AIK                   GY+YRDQINAFL QF+GFIEGYG A
Sbjct: 91   ENDDGGGLE-GDTAIKGTLLAGVLLVGVVGGFGAVGYVYRDQINAFLNQFSGFIEGYGPA 149

Query: 796  GYVLFIAVYAGLEILAIPAIPLTMSAGLLFGTFTGTIIVSISGTVAATLAFLIARYFARE 617
            GY LF+AVYAGLEILAIPAIPLTMSAGLLFG+  GTIIVSISGTVAA++AFLIARYFARE
Sbjct: 150  GYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVIGTIIVSISGTVAASVAFLIARYFARE 209

Query: 616  RILKMVEGNKKFLAIDKAIGENGFRVVTXXXXXXXXXXXLGNYLYGLTSVKFLPYVLGSW 437
            RILK+VEGNKKFLAIDKAIGENGFRVVT           LGNYLYGLTSVKF+PYVLGSW
Sbjct: 210  RILKLVEGNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSW 269

Query: 436  LGMLPGTWAYVSAGAFGRAIIQEEADTGLIGGNGQWVT 323
            LGMLPGTWAYVSAGAFGRAIIQEE+D GL+GGN   +T
Sbjct: 270  LGMLPGTWAYVSAGAFGRAIIQEESDIGLVGGNNSLLT 307


>ref|XP_004141545.1| PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Cucumis
            sativus] gi|449481518|ref|XP_004156206.1| PREDICTED:
            TVP38/TMEM64 family membrane protein slr0305-like
            [Cucumis sativus]
          Length = 334

 Score =  311 bits (796), Expect = 3e-82
 Identities = 175/305 (57%), Positives = 202/305 (66%), Gaps = 2/305 (0%)
 Frame = -3

Query: 1240 MRTLTLTTPHLSASPRPPLNQPFLLPLRPTSLLFPFKP-KRFHLFXXXXXXXXXXXXXXX 1064
            MR L LT    S++P P L+ P   P   +S LF F+P KRFH                 
Sbjct: 1    MRVL-LTLRPASSNPPPCLSSPNFSPPLASSFLFSFRPNKRFHFLKPCSSLKQSKKPTLQ 59

Query: 1063 XXXXKVPLSFKRLVNSNDNGDDDSKEKQXXXXXXXXXXGAENAIKXXXXXXXXXXXXXXX 884
                  P SFK L ++  + DD  ++              ++A+K               
Sbjct: 60   KTPTSAPQSFKWLFSAKSDDDDAGEKGNKGVDGDGAVLEDDSAVKGTLLAGVLLVGVIGG 119

Query: 883  XXXXGYIYRDQINAFLTQFTGFIEGYGTAGYVLFIAVYAGLEILAIPAIPLTMSAGLLFG 704
                GY+YRD INAFL QF+ FI+GYG AGY LF+AVYAGLEILAIPAIPLTMSAGLLFG
Sbjct: 120  FAFAGYVYRDPINAFLNQFSTFIDGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFG 179

Query: 703  TFTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVVTXXX 524
            +  GT+IVSISGTVAA++AFLIARYFARERILK+VEGNKKF AIDKAIGENGF+VVT   
Sbjct: 180  SVIGTVIVSISGTVAASVAFLIARYFARERILKLVEGNKKFAAIDKAIGENGFKVVTLLR 239

Query: 523  XXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEEADTGLI- 347
                    LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSAGAFGRAIIQEE++ GL+ 
Sbjct: 240  LSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEVGLLG 299

Query: 346  GGNGQ 332
            GGNGQ
Sbjct: 300  GGNGQ 304


>emb|CBI31257.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  308 bits (789), Expect = 2e-81
 Identities = 174/306 (56%), Positives = 198/306 (64%)
 Frame = -3

Query: 1240 MRTLTLTTPHLSASPRPPLNQPFLLPLRPTSLLFPFKPKRFHLFXXXXXXXXXXXXXXXX 1061
            M TL+L+           L+ P      P+S LF F+PKRFH                  
Sbjct: 1    MPTLSLSLRLSHRHHHHHLSSPLHSLFSPSSFLFSFRPKRFHFLKPCSSLKQT------- 53

Query: 1060 XXXKVPLSFKRLVNSNDNGDDDSKEKQXXXXXXXXXXGAENAIKXXXXXXXXXXXXXXXX 881
                     K+ +    +G +  +  +              +IK                
Sbjct: 54   ---------KKQLQKTSSGSNAPQSLRWFLNP--------KSIKGTLLAGLLLVGVVGGF 96

Query: 880  XXXGYIYRDQINAFLTQFTGFIEGYGTAGYVLFIAVYAGLEILAIPAIPLTMSAGLLFGT 701
               GY+YRDQINAFLTQF+GFIEGYG AGY LF+AVYAGLEILAIPAIPLTMSAGLLFG+
Sbjct: 97   ATVGYVYRDQINAFLTQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGS 156

Query: 700  FTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVVTXXXX 521
            FTGTIIVSISGTVAA++AFLIARYFARERILK+VEGNKKFLAIDKAIGENGFRVVT    
Sbjct: 157  FTGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFRVVTLLRL 216

Query: 520  XXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEEADTGLIGG 341
                   LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSAGAFGRAIIQ+E+D GL+GG
Sbjct: 217  SPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGTWAYVSAGAFGRAIIQDESDIGLLGG 276

Query: 340  NGQWVT 323
            N   +T
Sbjct: 277  NNSLIT 282


>ref|XP_003605529.1| TVP38/TMEM64 family membrane protein slr0305 [Medicago truncatula]
            gi|355506584|gb|AES87726.1| TVP38/TMEM64 family membrane
            protein slr0305 [Medicago truncatula]
          Length = 331

 Score =  301 bits (771), Expect = 2e-79
 Identities = 163/245 (66%), Positives = 181/245 (73%), Gaps = 4/245 (1%)
 Frame = -3

Query: 1045 PLSFKRLVN-SNDNGDDDSKEKQXXXXXXXXXXGAEN---AIKXXXXXXXXXXXXXXXXX 878
            P   KRL N  N+N +DD  EK+            E+   A+K                 
Sbjct: 59   PSRLKRLFNPKNENDNDDKNEKKKKKRGESEKDEEEDNGVALKGTLLAGFLLVGFVGGFA 118

Query: 877  XXGYIYRDQINAFLTQFTGFIEGYGTAGYVLFIAVYAGLEILAIPAIPLTMSAGLLFGTF 698
              GYIYR+ IN FL QF+GFIEGYG+AGY LF+AVYAGLEILAIPAIPLTMSAGLLFG+ 
Sbjct: 119  SVGYIYREPINTFLNQFSGFIEGYGSAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSL 178

Query: 697  TGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVVTXXXXX 518
            TGTIIVSISGTVAA++AFLIARYFARERILK+VEGNKKFLAIDKAIGENGF+VVT     
Sbjct: 179  TGTIIVSISGTVAASVAFLIARYFARERILKLVEGNKKFLAIDKAIGENGFKVVTLLRLS 238

Query: 517  XXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEEADTGLIGGN 338
                  LGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEE++   +GGN
Sbjct: 239  PLLPFSLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESELSSLGGN 298

Query: 337  GQWVT 323
             Q +T
Sbjct: 299  NQLLT 303


>ref|XP_002327389.1| predicted protein [Populus trichocarpa] gi|118487737|gb|ABK95692.1|
            unknown [Populus trichocarpa] gi|222835759|gb|EEE74194.1|
            predicted protein [Populus trichocarpa]
          Length = 331

 Score =  299 bits (765), Expect = 1e-78
 Identities = 174/305 (57%), Positives = 196/305 (64%), Gaps = 3/305 (0%)
 Frame = -3

Query: 1240 MRTLTLTTPHLSASPRPP-LNQPFLLPLRPTSLL-FPFKP-KRFHLFXXXXXXXXXXXXX 1070
            MRTL  + P    +P PP L   F     P +L  + F+P KR H               
Sbjct: 1    MRTLLNSRP---LTPPPPFLTSNFHSSPPPCTLFHYSFRPNKRIHFLTPCSSLKQRKKQP 57

Query: 1069 XXXXXXKVPLSFKRLVNSNDNGDDDSKEKQXXXXXXXXXXGAENAIKXXXXXXXXXXXXX 890
                    P S +  +N    GDD   + +            + A K             
Sbjct: 58   ETLRKTNAPQSLRWFLNPK--GDDSDDKIKGDGGEAEEGLEGDTAFKGTLLAGVLLVGVV 115

Query: 889  XXXXXXGYIYRDQINAFLTQFTGFIEGYGTAGYVLFIAVYAGLEILAIPAIPLTMSAGLL 710
                  GYIY+DQINAFL QF+GFIEGYG AGY LF+AVYAGLEILAIPAIPLTMSAGLL
Sbjct: 116  GGFGAVGYIYKDQINAFLNQFSGFIEGYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLL 175

Query: 709  FGTFTGTIIVSISGTVAATLAFLIARYFARERILKMVEGNKKFLAIDKAIGENGFRVVTX 530
            FG+  GTIIVSISGTVAA++AFLIARYFARERILK+V+GNKKFLAIDKAIGENGF+VVT 
Sbjct: 176  FGSLIGTIIVSISGTVAASIAFLIARYFARERILKLVQGNKKFLAIDKAIGENGFKVVTL 235

Query: 529  XXXXXXXXXXLGNYLYGLTSVKFLPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEEADTGL 350
                      LGNYLYGLTSVKF+PYVLGSWLGMLPGTWAYVSAGAFGRAIIQEE++ GL
Sbjct: 236  LRLSPLLPFSLGNYLYGLTSVKFIPYVLGSWLGMLPGTWAYVSAGAFGRAIIQEESEIGL 295

Query: 349  IGGNG 335
             GGNG
Sbjct: 296  GGGNG 300


Top