BLASTX nr result

ID: Cimicifuga21_contig00013974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013974
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [R...   300   4e-79
ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|2...   293   5e-77
ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [...   292   8e-77
gb|AFK46692.1| unknown [Medicago truncatula]                          290   4e-76
ref|XP_003534054.1| PREDICTED: vesicle transport protein SFT2B-l...   286   4e-75

>ref|XP_002518017.1| Vesicle transport protein SFT2B, putative [Ricinus communis]
           gi|223542999|gb|EEF44535.1| Vesicle transport protein
           SFT2B, putative [Ricinus communis]
          Length = 174

 Score =  300 bits (767), Expect = 4e-79
 Identities = 147/174 (84%), Positives = 164/174 (94%), Gaps = 2/174 (1%)
 Frame = -3

Query: 795 MERMNQAMEKVKILVGMEVDEE--VAEESSMSFMDDFNRNCTLSTQQRLYGFAICLVSGL 622
           ME+M +AMEK+K+LVG+EV++E   A E S SF+DDFNRNCTLST+QRLYGFAIC  SGL
Sbjct: 1   MEKMKEAMEKMKMLVGLEVEDEEPAAAEESASFLDDFNRNCTLSTKQRLYGFAICFFSGL 60

Query: 621 ACTLLSMLVFFHPIKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALYLASI 442
           ACTLLSMLVFF+P+KFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATAL+LASI
Sbjct: 61  ACTLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALFLASI 120

Query: 441 IVALFCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARSMVSKIMASCFDTEF 280
           I+ALFCALYVHNKLLTLLAI+LEFGAL+WYSLSYIPFARSMVSK+M +CFDTEF
Sbjct: 121 IIALFCALYVHNKLLTLLAIVLEFGALVWYSLSYIPFARSMVSKVMLACFDTEF 174


>ref|XP_002305352.1| predicted protein [Populus trichocarpa] gi|222848316|gb|EEE85863.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  293 bits (749), Expect = 5e-77
 Identities = 146/177 (82%), Positives = 161/177 (90%), Gaps = 5/177 (2%)
 Frame = -3

Query: 795 MERMNQAMEKVKILVGMEVDEE-----VAEESSMSFMDDFNRNCTLSTQQRLYGFAICLV 631
           M++MNQA EKVK+LVGMEV++E       E SS +FMDDFNR+CTLST+QR YGFAIC  
Sbjct: 1   MQKMNQAFEKVKMLVGMEVEDEEEGVATVESSSFTFMDDFNRDCTLSTKQRFYGFAICFS 60

Query: 630 SGLACTLLSMLVFFHPIKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALYL 451
           +GLAC LLSMLVFF+P+KFGITFTFGNLLSLGSTAFLIGPKRQV+MMLDPVRIYATALYL
Sbjct: 61  TGLACVLLSMLVFFNPVKFGITFTFGNLLSLGSTAFLIGPKRQVSMMLDPVRIYATALYL 120

Query: 450 ASIIVALFCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARSMVSKIMASCFDTEF 280
           ASII+AL CALYVHNKLLTLLAIILEFGALIWYSLSYIPFAR+MVSKIM +CFDTEF
Sbjct: 121 ASIIIALLCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARAMVSKIMLACFDTEF 177


>ref|XP_002270756.1| PREDICTED: vesicle transport protein SFT2B [Vitis vinifera]
           gi|296084822|emb|CBI27704.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  292 bits (747), Expect = 8e-77
 Identities = 146/177 (82%), Positives = 160/177 (90%), Gaps = 5/177 (2%)
 Frame = -3

Query: 795 MERMNQAMEKVKILVGMEVDEEV-----AEESSMSFMDDFNRNCTLSTQQRLYGFAICLV 631
           ME+MN A E+VKILVGMEVD++       ++   SFMDDFNR+CTLST+QR YGFAICL 
Sbjct: 1   MEKMNHAFERVKILVGMEVDDDQNVAAPPDDGPFSFMDDFNRDCTLSTKQRFYGFAICLA 60

Query: 630 SGLACTLLSMLVFFHPIKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALYL 451
           +GL CTLLSMLVFF+PIKFGITFTFGNLL+LGSTAFLIGPKRQVTMMLDPVRIYATA+YL
Sbjct: 61  AGLTCTLLSMLVFFNPIKFGITFTFGNLLALGSTAFLIGPKRQVTMMLDPVRIYATAIYL 120

Query: 450 ASIIVALFCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARSMVSKIMASCFDTEF 280
           ASII+ALFCALYV NKLLTLLAI+LEFGALIWYSLSYIPFARSMVSKIM SCFDTEF
Sbjct: 121 ASIIIALFCALYVRNKLLTLLAIMLEFGALIWYSLSYIPFARSMVSKIMVSCFDTEF 177


>gb|AFK46692.1| unknown [Medicago truncatula]
          Length = 178

 Score =  290 bits (741), Expect = 4e-76
 Identities = 144/178 (80%), Positives = 159/178 (89%), Gaps = 6/178 (3%)
 Frame = -3

Query: 795 MERMNQAMEKVKILVGMEVDEEVAE------ESSMSFMDDFNRNCTLSTQQRLYGFAICL 634
           ME+MN+A EKVKI+VGMEV++E A+      ESS +FMDDFNRNCTLS  QRLYGFAIC 
Sbjct: 1   MEKMNKAFEKVKIMVGMEVEDEEAQAAALENESSFAFMDDFNRNCTLSRTQRLYGFAICF 60

Query: 633 VSGLACTLLSMLVFFHPIKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALY 454
            +G+ CTLLSMLVF  PIKFGITFT GNLLSLGSTAFLIGPKRQV+MMLDPVRIYATA+Y
Sbjct: 61  AAGVTCTLLSMLVFLKPIKFGITFTLGNLLSLGSTAFLIGPKRQVSMMLDPVRIYATAIY 120

Query: 453 LASIIVALFCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARSMVSKIMASCFDTEF 280
           +AS+I+ALFCALYVHNKLLT LAIILEFGAL+WYSLSYIPFARSMVSKIM SCFDTEF
Sbjct: 121 IASMIIALFCALYVHNKLLTFLAIILEFGALVWYSLSYIPFARSMVSKIMVSCFDTEF 178


>ref|XP_003534054.1| PREDICTED: vesicle transport protein SFT2B-like isoform 1 [Glycine
           max]
          Length = 178

 Score =  286 bits (733), Expect = 4e-75
 Identities = 142/178 (79%), Positives = 157/178 (88%), Gaps = 6/178 (3%)
 Frame = -3

Query: 795 MERMNQAMEKVKILVGMEVDEEVAE------ESSMSFMDDFNRNCTLSTQQRLYGFAICL 634
           ME+MN+A EKVKI+VGM+V++E  +       +S +FMDDFNRNCTLST QRLYGFAIC 
Sbjct: 1   MEKMNKAFEKVKIMVGMDVEDEEQQAAALDNSNSFAFMDDFNRNCTLSTTQRLYGFAICF 60

Query: 633 VSGLACTLLSMLVFFHPIKFGITFTFGNLLSLGSTAFLIGPKRQVTMMLDPVRIYATALY 454
            SGL CTLLSMLVFF PIKF I FT GNLLSLGSTAFLIGPKRQVTMMLDP RIYATA+Y
Sbjct: 61  ASGLTCTLLSMLVFFKPIKFAIAFTLGNLLSLGSTAFLIGPKRQVTMMLDPARIYATAIY 120

Query: 453 LASIIVALFCALYVHNKLLTLLAIILEFGALIWYSLSYIPFARSMVSKIMASCFDTEF 280
           +AS+I+ALFCALYVHNKLLTLLAIILEFGAL+WYSLSYIPFAR+MVSKIM SCFDTEF
Sbjct: 121 IASMIIALFCALYVHNKLLTLLAIILEFGALVWYSLSYIPFARAMVSKIMVSCFDTEF 178


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