BLASTX nr result
ID: Cimicifuga21_contig00013967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00013967
(1915 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23309.3| unnamed protein product [Vitis vinifera] 724 0.0
emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera] 722 0.0
ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleop... 682 0.0
ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleop... 656 0.0
emb|CBI23305.3| unnamed protein product [Vitis vinifera] 621 e-175
>emb|CBI23309.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 724 bits (1868), Expect = 0.0
Identities = 384/640 (60%), Positives = 445/640 (69%), Gaps = 47/640 (7%)
Frame = +1
Query: 82 KRELPTQDQQESKKAKLTDSSSHKSESKQAVKLNPADCDLDFDIVANGLQGQALHDQGFA 261
KR+L ++ ESKK K S S + ++KQ V LNPADCDLDF+IV +GLQG ALHD GFA
Sbjct: 5 KRQLSEPEEPESKKPKAVLSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 64
Query: 262 YCWSGARANVGIKGGKYVFGCKIVAAQPVEMEDTDPYQQHVCRIGISRGDDAVGNLGETA 441
YCWSGAR NVGI GGKY FGCKI++ QPV+MEDT P QQHVCR+GISRGDDAVGNLGET
Sbjct: 65 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETE 124
Query: 442 HSFGYGGTGKFSSAGKFSNYGETFGVGDTIVCTVNLESKPLASMGFYKNGKWLGIAREFN 621
HSFG+GGTGKFS AGKFSNYGE FGVGDTIVC VNLE+KPLAS+ F KNGKWLG+A+EF+
Sbjct: 125 HSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFD 184
Query: 622 AGPNGLGVVDTPLRERQWESAIFPHVLLKNVVVELQFSAEDGLVLEEGHKAWDCAFEDGN 801
AG GLGVVD+P+R+ WESA+FPHVLLKNV+V++QFS E+GLV EEG+K W A DGN
Sbjct: 185 AGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGN 244
Query: 802 AIMGPVFGDAKDCEILMMVGLPASGKTTWAEKWVKEHPEKRYILLGTNLALDQMKVPGLL 981
AIMGP F +DCE++MMVGLPASGK+TWAEKWVKEH EKRY+LLGTNLALDQMKVPGLL
Sbjct: 245 AIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLL 304
Query: 982 RKQNYGERFDRLMNRATVIFNTLLARAAKTPRNCIIDQTNVYKGARKRKLSPFFQYRKIA 1161
RKQNYGERF+RLM+RAT IFNTLL+RA+KTP N IIDQTNVYK ARKRKL PF ++KIA
Sbjct: 305 RKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIA 364
Query: 1162 VVVFPKPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPTSKDMLRSDESFDQVWFPEL 1341
VV+FPKP+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKDM SDE FDQV FPEL
Sbjct: 365 VVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPGSDEDFDQVLFPEL 424
Query: 1342 NREDSQRYLGEMKRAL----------------EXXXXXXXXXXXXXXXXXXXVLQKATIG 1473
NR ++Q+ L EMKRAL + V + ++
Sbjct: 425 NRGEAQKCLEEMKRALGTASHLNLKSNFSPYSQESSLQSYNSSSLQNQGAPSVPDERSLS 484
Query: 1474 QHYPNLPTFQAAYDHPTHQVINSAHPGVGLQGQPEYVHGQHQFGSGP------------- 1614
H P LP Y P H +NS H GV L G+ E +Q P
Sbjct: 485 YH-PPLPQ-NYYYQRPAH--MNSGHQGVALHGRVEPFPRAYQDNQNPFMPRDAPYETSLG 540
Query: 1615 -----------ESYGNYGRSESRSPIPG-GSTSYQNYGRVDSYGRPYSESRSSVSAGGMA 1758
SYG YG SR IPG G SYQ++G VD Y R ESR+ + G
Sbjct: 541 YSRNFLSRNDSNSYGTYGYDNSRGSIPGVGMASYQSFGMVDPYRRTNLESRNPIPMGATD 600
Query: 1759 PY-----ESHVPNSDRSRSTYGSNFGSPRT-LFSYNNYAG 1860
PY ESH + + Y + S RT LFS+N G
Sbjct: 601 PYVSGMVESHDKYNVEGVNHYETQAESMRTSLFSHNTLGG 640
>emb|CAN66470.1| hypothetical protein VITISV_016567 [Vitis vinifera]
Length = 1021
Score = 722 bits (1864), Expect = 0.0
Identities = 384/640 (60%), Positives = 444/640 (69%), Gaps = 47/640 (7%)
Frame = +1
Query: 82 KRELPTQDQQESKKAKLTDSSSHKSESKQAVKLNPADCDLDFDIVANGLQGQALHDQGFA 261
KR+L ++ ESKK K S S + ++KQ V LNPADCDLDF+IV +GLQG ALHD GFA
Sbjct: 172 KRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 231
Query: 262 YCWSGARANVGIKGGKYVFGCKIVAAQPVEMEDTDPYQQHVCRIGISRGDDAVGNLGETA 441
YCWSGAR NVGI GGKY FGCKI++ QPV+MEDT P QQHVCR+GISRGDDAVGNLGET
Sbjct: 232 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETE 291
Query: 442 HSFGYGGTGKFSSAGKFSNYGETFGVGDTIVCTVNLESKPLASMGFYKNGKWLGIAREFN 621
HSFG+GGTGKFS AGKFSNYGE FGVGDTIVC VNLE+KPLAS+ F KNGKWLG+A+EF+
Sbjct: 292 HSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFD 351
Query: 622 AGPNGLGVVDTPLRERQWESAIFPHVLLKNVVVELQFSAEDGLVLEEGHKAWDCAFEDGN 801
AG GLGVVD+P+R+ WESA+FPHVLLKNV+V++QFS E+GLV EEG+K W A DGN
Sbjct: 352 AGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGN 411
Query: 802 AIMGPVFGDAKDCEILMMVGLPASGKTTWAEKWVKEHPEKRYILLGTNLALDQMKVPGLL 981
AIMGP F +DCE++MMVGLPASGK+TWAEKWVKEH EKRY+LLGTNLALDQMKVPGLL
Sbjct: 412 AIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLL 471
Query: 982 RKQNYGERFDRLMNRATVIFNTLLARAAKTPRNCIIDQTNVYKGARKRKLSPFFQYRKIA 1161
RKQNYGERF+RLM+RAT IFNTLL+RA+KTP N IIDQTNVYK ARKRKL PF ++KIA
Sbjct: 472 RKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIA 531
Query: 1162 VVVFPKPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPTSKDMLRSDESFDQVWFPEL 1341
VV+FPKP+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKDM SDE FDQV FPEL
Sbjct: 532 VVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPGSDEDFDQVLFPEL 591
Query: 1342 NREDSQRYLGEMKRAL----------------EXXXXXXXXXXXXXXXXXXXVLQKATIG 1473
NR +Q+ L EMKRAL + V + ++
Sbjct: 592 NRGXAQKCLEEMKRALGTASHLNLKSNFSXYSQESSLQSYNSSSLQNQGAPSVPDERSLS 651
Query: 1474 QHYPNLPTFQAAYDHPTHQVINSAHPGVGLQGQPEYVHGQHQFGSGP------------- 1614
H P LP Y P H +NS H GV L G+ E +Q P
Sbjct: 652 YH-PPLPQ-NYYYQRPAH--MNSGHQGVALHGRVEPFPRAYQDNQNPFMPRDAPYETSLG 707
Query: 1615 -----------ESYGNYGRSESRSPIPG-GSTSYQNYGRVDSYGRPYSESRSSVSAGGMA 1758
SYG YG SR IPG G SYQ++G VD Y R ESR+ + G
Sbjct: 708 YSRNFLSRNDSNSYGTYGYDNSRGSIPGVGMASYQSFGMVDPYRRTNLESRNPIXMGATD 767
Query: 1759 PY-----ESHVPNSDRSRSTYGSNFGSPRT-LFSYNNYAG 1860
PY ESH + + Y + S RT LFS+N G
Sbjct: 768 PYVSGMVESHDKYNVEGVNHYETQAESMRTSLFSHNTLGG 807
>ref|XP_003635003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Vitis vinifera]
Length = 514
Score = 682 bits (1761), Expect = 0.0
Identities = 329/436 (75%), Positives = 375/436 (86%)
Frame = +1
Query: 82 KRELPTQDQQESKKAKLTDSSSHKSESKQAVKLNPADCDLDFDIVANGLQGQALHDQGFA 261
KR+L ++ ESKK K S S + ++KQ V LNPADCDLDF+IV +GLQG ALHD GFA
Sbjct: 5 KRQLSEPEEPESKKPKAVLSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 64
Query: 262 YCWSGARANVGIKGGKYVFGCKIVAAQPVEMEDTDPYQQHVCRIGISRGDDAVGNLGETA 441
YCWSGAR NVGI GGKY FGCKI++ QPV+MEDT P QQHVCR+GISRGDDAVGNLGET
Sbjct: 65 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETE 124
Query: 442 HSFGYGGTGKFSSAGKFSNYGETFGVGDTIVCTVNLESKPLASMGFYKNGKWLGIAREFN 621
HSFG+GGTGKFS AGKFSNYGE FGVGDTIVC VNLE+KPLAS+ F KNGKWLG+A+EF+
Sbjct: 125 HSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFD 184
Query: 622 AGPNGLGVVDTPLRERQWESAIFPHVLLKNVVVELQFSAEDGLVLEEGHKAWDCAFEDGN 801
AG GLGVVD+P+R+ WESA+FPHVLLKNV+V++QFS E+GLV EEG+K W A DGN
Sbjct: 185 AGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGN 244
Query: 802 AIMGPVFGDAKDCEILMMVGLPASGKTTWAEKWVKEHPEKRYILLGTNLALDQMKVPGLL 981
AIMGP F +DCE++MMVGLPASGK+TWAEKWVKEH EKRY+LLGTNLALDQMKVPGLL
Sbjct: 245 AIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLL 304
Query: 982 RKQNYGERFDRLMNRATVIFNTLLARAAKTPRNCIIDQTNVYKGARKRKLSPFFQYRKIA 1161
RKQNYGERF+RLM+RAT IFNTLL+RA+KTP N IIDQTNVYK ARKRKL PF ++KIA
Sbjct: 305 RKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIA 364
Query: 1162 VVVFPKPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPTSKDMLRSDESFDQVWFPEL 1341
VV+FPKP+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKDM SDE FDQV FPEL
Sbjct: 365 VVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPRSKDMPGSDEDFDQVLFPEL 424
Query: 1342 NREDSQRYLGEMKRAL 1389
NR ++Q+ L EMKRAL
Sbjct: 425 NRGEAQKCLEEMKRAL 440
>ref|XP_002271342.2| PREDICTED: heterogeneous nuclear ribonucleoprotein U-like protein
1-like [Vitis vinifera]
Length = 590
Score = 656 bits (1692), Expect = 0.0
Identities = 315/420 (75%), Positives = 360/420 (85%)
Frame = +1
Query: 82 KRELPTQDQQESKKAKLTDSSSHKSESKQAVKLNPADCDLDFDIVANGLQGQALHDQGFA 261
KR+L ++ ESKK K S S + ++KQ V LNPADCDLDF+IV +GLQG ALHD GFA
Sbjct: 152 KRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 211
Query: 262 YCWSGARANVGIKGGKYVFGCKIVAAQPVEMEDTDPYQQHVCRIGISRGDDAVGNLGETA 441
YCWSGAR NVGI GGKY FGCKI++ QPV+MEDT P QQHVCR+GISRGDDAVGNLGET
Sbjct: 212 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETE 271
Query: 442 HSFGYGGTGKFSSAGKFSNYGETFGVGDTIVCTVNLESKPLASMGFYKNGKWLGIAREFN 621
HSFG+GGTGKFS AGKFSNYGE FGVGDTIVC VNLE+KPLAS+ F KNGKWLG+A+EF+
Sbjct: 272 HSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFD 331
Query: 622 AGPNGLGVVDTPLRERQWESAIFPHVLLKNVVVELQFSAEDGLVLEEGHKAWDCAFEDGN 801
AG GLGVVD+P+R+ WESA+FPHVLLKNV+V++QFS E+GLV EEG+K W A DGN
Sbjct: 332 AGVKGLGVVDSPMRQLHWESALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGN 391
Query: 802 AIMGPVFGDAKDCEILMMVGLPASGKTTWAEKWVKEHPEKRYILLGTNLALDQMKVPGLL 981
AIMGP F +DCE++MMVGLPASGK+TWAEKWVKEH EKRY+LLGTNLALDQMKVPGLL
Sbjct: 392 AIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLL 451
Query: 982 RKQNYGERFDRLMNRATVIFNTLLARAAKTPRNCIIDQTNVYKGARKRKLSPFFQYRKIA 1161
RKQNYGERF+RLM+RAT IFNTLL+RA+KTP N IIDQTNVYK ARKRKL PF ++KIA
Sbjct: 452 RKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIA 511
Query: 1162 VVVFPKPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPTSKDMLRSDESFDQVWFPEL 1341
VV+FPKP+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKDM SDE FDQ++ L
Sbjct: 512 VVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPGSDEDFDQLFMDML 571
>emb|CBI23305.3| unnamed protein product [Vitis vinifera]
Length = 1459
Score = 621 bits (1601), Expect = e-175
Identities = 304/415 (73%), Positives = 344/415 (82%)
Frame = +1
Query: 82 KRELPTQDQQESKKAKLTDSSSHKSESKQAVKLNPADCDLDFDIVANGLQGQALHDQGFA 261
KR+L ++ ESKK K S S + ++KQ V LNPADCDLDF+IV +GLQG ALHD GFA
Sbjct: 13 KRQLSEPEEPESKKPKAALSDSPEHKTKQRVVLNPADCDLDFNIVGDGLQGSALHDHGFA 72
Query: 262 YCWSGARANVGIKGGKYVFGCKIVAAQPVEMEDTDPYQQHVCRIGISRGDDAVGNLGETA 441
YCWSGAR NVGI GGKY FGCKI++ QPV+MEDT P QQHVCR+GISRGDDAVGNLGET
Sbjct: 73 YCWSGARGNVGITGGKYCFGCKIISTQPVDMEDTPPDQQHVCRLGISRGDDAVGNLGETE 132
Query: 442 HSFGYGGTGKFSSAGKFSNYGETFGVGDTIVCTVNLESKPLASMGFYKNGKWLGIAREFN 621
HSFG+GGTGKFS AGKFSNYGE FGVGDTIVC VNLE+KPLAS+ F KNGKWLG+A+EF+
Sbjct: 133 HSFGFGGTGKFSVAGKFSNYGEKFGVGDTIVCAVNLETKPLASISFSKNGKWLGVAKEFD 192
Query: 622 AGPNGLGVVDTPLRERQWESAIFPHVLLKNVVVELQFSAEDGLVLEEGHKAWDCAFEDGN 801
AG A+FPHVLLKNV+V++QFS E+GLV EEG+K W A DGN
Sbjct: 193 AGVK----------------ALFPHVLLKNVMVQVQFSTEEGLVPEEGYKPWASALYDGN 236
Query: 802 AIMGPVFGDAKDCEILMMVGLPASGKTTWAEKWVKEHPEKRYILLGTNLALDQMKVPGLL 981
AIMGP F +DCE++MMVGLPASGK+TWAEKWVKEH EKRY+LLGTNLALDQMKVPGLL
Sbjct: 237 AIMGPSFSSPRDCEVMMMVGLPASGKSTWAEKWVKEHAEKRYVLLGTNLALDQMKVPGLL 296
Query: 982 RKQNYGERFDRLMNRATVIFNTLLARAAKTPRNCIIDQTNVYKGARKRKLSPFFQYRKIA 1161
RKQNYGERF+RLM+RAT IFNTLL+RA+KTP N IIDQTNVYK ARKRKL PF ++KIA
Sbjct: 297 RKQNYGERFERLMDRATGIFNTLLSRASKTPHNYIIDQTNVYKNARKRKLKPFANFQKIA 356
Query: 1162 VVVFPKPDVVKLRAEKRFKEMGKEVPAEAVNEMLANYVLPTSKDMLRSDESFDQV 1326
VV+FPKP+ +K RAEKRFKEMGKEVPA+AVNEM+ANYVLP SKDM SDE FDQV
Sbjct: 357 VVLFPKPEELKFRAEKRFKEMGKEVPADAVNEMIANYVLPGSKDMPGSDEDFDQV 411