BLASTX nr result

ID: Cimicifuga21_contig00013964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013964
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...    62   1e-15
gb|AFV15382.1| AGO4B [Solanum lycopersicum]                            64   2e-15
gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]                 63   2e-15
gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]                 62   1e-14
ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...    62   2e-14

>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score = 62.4 bits (150), Expect(2) = 1e-15
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +2

Query: 134 RELLLDFYMSLGKRKPDHIVIFRDGVRESQFNQV 235
           RELLLDFY+S GKRKPD I+IFRDGV ESQFNQV
Sbjct: 708 RELLLDFYVSSGKRKPDQIIIFRDGVSESQFNQV 741



 Score = 45.1 bits (105), Expect(2) = 1e-15
 Identities = 22/25 (88%), Positives = 23/25 (92%)
 Frame = +3

Query: 3   ASVRTQSPKVEMIDSLFKPVSETSD 77
           ASVRTQSPKVEMIDSL+K VSET D
Sbjct: 679 ASVRTQSPKVEMIDSLYKRVSETED 703


>gb|AFV15382.1| AGO4B [Solanum lycopersicum]
          Length = 913

 Score = 63.5 bits (153), Expect(2) = 2e-15
 Identities = 28/34 (82%), Positives = 32/34 (94%)
 Frame = +2

Query: 134 RELLLDFYMSLGKRKPDHIVIFRDGVRESQFNQV 235
           RELLLDFY+S GKRKP+HI++FRDGV ESQFNQV
Sbjct: 708 RELLLDFYVSSGKRKPEHIIVFRDGVSESQFNQV 741



 Score = 43.5 bits (101), Expect(2) = 2e-15
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 3   ASVRTQSPKVEMIDSLFKPVSETSD 77
           ASVRTQSPKVEMID++FK VS+T D
Sbjct: 679 ASVRTQSPKVEMIDNIFKKVSDTDD 703


>gb|ABC61504.1| AGO4-1, partial [Nicotiana benthamiana]
          Length = 912

 Score = 62.8 bits (151), Expect(2) = 2e-15
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +2

Query: 134 RELLLDFYMSLGKRKPDHIVIFRDGVRESQFNQV 235
           RELLLDFY+  GKRKP+HIVIFRDGV ESQFNQV
Sbjct: 707 RELLLDFYVGSGKRKPEHIVIFRDGVSESQFNQV 740



 Score = 44.3 bits (103), Expect(2) = 2e-15
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +3

Query: 3   ASVRTQSPKVEMIDSLFKPVSETSD 77
           ASVRTQSPKVEMID+LFK VS+T D
Sbjct: 678 ASVRTQSPKVEMIDNLFKKVSDTED 702


>gb|ABC61505.1| AGO4-2, partial [Nicotiana benthamiana]
          Length = 905

 Score = 62.0 bits (149), Expect(2) = 1e-14
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +2

Query: 134 RELLLDFYMSLGKRKPDHIVIFRDGVRESQFNQV 235
           RE LLDFY+S GKRKP+HI+IFRDGV ESQFNQV
Sbjct: 700 REALLDFYVSSGKRKPEHIIIFRDGVSESQFNQV 733



 Score = 42.4 bits (98), Expect(2) = 1e-14
 Identities = 20/25 (80%), Positives = 22/25 (88%)
 Frame = +3

Query: 3   ASVRTQSPKVEMIDSLFKPVSETSD 77
           ASVRTQSPKVEMID+LFK  S+T D
Sbjct: 671 ASVRTQSPKVEMIDNLFKRASDTED 695


>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
           sativus]
          Length = 915

 Score = 61.6 bits (148), Expect(2) = 2e-14
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = +2

Query: 134 RELLLDFYMSLGKRKPDHIVIFRDGVRESQFNQV 235
           RELLLDFY S GKRKPD I+IFRDGV ESQFNQV
Sbjct: 710 RELLLDFYTSSGKRKPDQIIIFRDGVSESQFNQV 743



 Score = 42.4 bits (98), Expect(2) = 2e-14
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 3   ASVRTQSPKVEMIDSLFKPVSETSD 77
           A+VRTQSPKVEMIDSL+K +S+T D
Sbjct: 681 AAVRTQSPKVEMIDSLYKRISDTED 705


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