BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00013960
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]      112   3e-23
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola...   110   9e-23
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl...   108   3e-22
emb|CBI23087.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch...   108   6e-22

>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
          Length = 280

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/63 (87%), Positives = 61/63 (96%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   KVGKAVQKHTHLAREVDVRLSVRGGEL-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGS 184
           K+GKAVQKH+HLAREVDVRLSVRGGEL KG K+RRCEVTLFTKKHGV+RAEEDAES+YGS
Sbjct: 79  KLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESIYGS 138

Query: 185 IDL 193
           ID+
Sbjct: 139 IDM 141


>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
           gi|51457950|gb|AAU03364.1| chloroplast-specific
           ribosomal protein [Solanum lycopersicum]
          Length = 311

 Score =  110 bits (276), Expect = 9e-23
 Identities = 54/63 (85%), Positives = 60/63 (95%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   KVGKAVQKHTHLAREVDVRLSVRGGEL-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGS 184
           K+GKAVQKH+HLAREVDVRLSVRGGEL KG K+RRCEVTLFTKKHGV+RAEED ES+YGS
Sbjct: 107 KLGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDGESIYGS 166

Query: 185 IDL 193
           ID+
Sbjct: 167 IDM 169


>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
           vinifera]
          Length = 298

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/63 (85%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   KVGKAVQKHTHLAREVDVRLSVRGGEL-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGS 184
           KVGKAVQKH+HL REVDVRLS+RGGEL KG K+RRCEVTLFTKKHGVVRAEE AE+LYGS
Sbjct: 100 KVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGS 159

Query: 185 IDL 193
           ID+
Sbjct: 160 IDM 162


>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  108 bits (271), Expect = 3e-22
 Identities = 54/63 (85%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   KVGKAVQKHTHLAREVDVRLSVRGGEL-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYGS 184
           KVGKAVQKH+HL REVDVRLS+RGGEL KG K+RRCEVTLFTKKHGVVRAEE AE+LYGS
Sbjct: 32  KVGKAVQKHSHLVREVDVRLSIRGGELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGS 91

Query: 185 IDL 193
           ID+
Sbjct: 92  IDM 94


>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
           putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
           Plastid-specific 30S ribosomal protein 1, chloroplast
           precursor, putative [Ricinus communis]
          Length = 311

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/64 (82%), Positives = 59/64 (92%), Gaps = 1/64 (1%)
 Frame = +2

Query: 5   NKVGKAVQKHTHLAREVDVRLSVRGGEL-KGQKLRRCEVTLFTKKHGVVRAEEDAESLYG 181
           +KVGKAVQKH+HL REVDVRLSVRGGE  KG K+RRCEVTLFTKKHGV+RAEEDAE++Y 
Sbjct: 109 DKVGKAVQKHSHLVREVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYA 168

Query: 182 SIDL 193
           SIDL
Sbjct: 169 SIDL 172